Examples
Illustration of SMAP effect-prediction
Below, we present a fictive example data set. The command to run SMAP effect-prediction is displayed with varying parameter settings to compare their respective output.
SMAP effect-prediction collects the following information from files prepared by the other modules of SMAP:
the gene sequence from the reference genome; SMAP target-selection extracts the gene sequence and places it with the CDS on the + strand orientation in the reference FASTA file used for SMAP.
the position of the CDS regions in the reference sequence; SMAP target-selection calculates the correct positions of the CDS with respect to the extracted gene reference sequence of 1).
the position of the amplicon(s) in the gene reference sequence; SMAP design creates pairs of primers for HiPlex sequencing of genomic DNA, and stores the relative position of the corresponding border regions in a GFF file.
the position of gRNA(s) for CRISPR/Cas genome editing within an amplicon; SMAP design optionally creates one or more gRNAs per amplicon to induce mutations in a particular position of the reference genome.
the collection of haplotypes per locus and their relative frequencies per sample; SMAP haplotype-window extracts haplotypes (exact DNA sequences) using the exact same reference gene coordinates as outlined in 1)-4).
>gene1 |
ATGGGCTCCTCCTACGACCCCTACCCGTCCCCGGGCGCCGACGACCTCTTCCTCTACCTCTCCGACCTCGGCCCCGCCTCGCCCTCCGCGTACCTCGACCTCCCACCCACCCCGCAGCCTCAGCCATACCCGCAGTCCCAGCAGCAGCAGCAGGGGAGCAAAGGCCCCACGCAGGACATGCTGCTCCCCTACATCTCCAGCATGCTCATGGAGGACGACATCGACGACACCTTCTTCTACGACTACCCGGACAACCCCGCGCTCCTCCAGGCGCAGCAGTCCTTCCTCGACATCCTCTCCGACGACGCCTCGTCCCCGACCACCACCACCGGCACCACCAACAGCAGCGCCAGCGTCAACCACTCCTCCTCCGACGCGTCCGCCAGCGCGCCGCCCACCCCAGCCGCGGTCGACTCCTACTCCCCGGCCCCCGCTGTCCAGTTCGACGGCTTCGACCTCGACCCCGCGGCCTTCTTCAGCAACGGGGCCAACTCCGACCTCATGAGCTCCGCCTTCCTCAAGGGCATGGAGGAGGCCAACAAGTTCCTGCCCTCGCAGGACAAGCTCGTCATCGACCTCGATCCGCCAGACGACACCAAGCGGTTTGTCCTCCCCACCCGCGCCGCAGAAAACCTCGCGCCCGGATTCAACGCCGCCGCCACCACCGTCCCTGCCGCCGTGGCTATGGCGGTGAAGGAGGAGGAGGTGATCCTCGCTGCGCTTGATGCCGCGCTTGGCAGCGGCGGCGTCGTCCTGGGCCGCGGTCGGAGGAACCGCTTGGACGATGACGAGGAGGACCTGGAGCTGCAGCGCCGGAGCACCAAGCAGAGCGCGCTGCAGGGGGACGGCGACGAGCGGGACGTCTTCGAGAAGTACATCATGACCTGCCCCGAGACGTGCACGGAGCAGATGCAGCAGCTGCGGATCGCCATGCAGGAGGAGGCCGCCAAGGAGGCGGCGGTCGCCGCCGGGAACGGCAAGGCCAAGGGCCGCCGCGGTGGGCGGGAGGTGGTGGACCTGCGCACGCTGCTCGTCCACTGCGCGCAGGCCGTCGCCTCGGACGACCGCCGCAGCGCCACCGAGCTGCTCAGGCAGATCAAGCAGCACGCAAGCCCGCAGGGGGACGCCACCCAGCGCCTCGCTCACTGCTTCGCCGAGGGCCTCCAGGCCCGCCTCGCCGGCACCGGCAGCATGGTTTACCAGTCGCTCATGGCCAAGCGCACGTCCGCAGCCGACATACTCCAGGCGTACCAGCTGTACATGGCCGCCATCTGCTTCAAGAGAGTCGTCTTCGTGTTCTCGAATAACACCATCTACAATGCCGCTCTGGGCAAGATGAAGATACATATCGTCGATTACGGGATCCATTACGGCTTCCAGTGGCCGTGCTTCCTTCGATGGATAGCGGATAGGGAGGGCGGGCCACCGGAGGTGAGGATTACTGGCATTGACCTGCCCCAGCCTGGGTTCCGCCCTACTCAGCGCATTGAGGAGACAGGGCGCCGGCTCAGCAAGTATGCCCAGCAGTTTGGTGTGCCATTCAAGTACCAGGCGATTGCAGCATCCAAGATGGAGTCCATCCGCGCGGAGGATCTGAATCTCGATCCAGAGGAGGTGCTCATCGTGAACTGCCTATACCAGTTTAAGAACTTGATGGATGAGAGCGTTGTGATTGAAAGCCCAAGGGACATTGTGCTCAATAACATCAGAAAGATGCGGCCTCATACATTCATACATGCAATTGTGAATGGCTCCTTCAGTGCGCCCTTCTTCGTGACGAGGTTCCGAGAGGCTCTGTTCTTTTACTCGGCCCTGTTTGACGCTCTGGACACGACCACTCCAAGAGACAGCAACCAGAGGATGCTGATTGAGGAGAACCTTTTCGGGCGGGCTGCCCTGAATGTCATCGCGTGCGAGGGCACAGATCGGGTGGAGCGCCCTGAGACGTACAAGCAATGGCAGGTGCGGAATCAACGAGCAGGCTTGAAGCAGCAGCCGCTGAACCCTGATGTCGTGCAGGTAGTGCGGAACAAGGTCAGGGATTTATACCACAAGGACTTTGTGATCGATATTGATCACCACTGGCTCTTGCAGGGATGGAAAGGCCGCATCCTCTATGCCATCTCGACATGGGTGGCAAATGATGCCCCCTCTTACTTTTAGCTGTTTTTTTGTGACTCACTTGTCTACAACTTTAGGGGCCAGTTTGGTACGGCGCGTGCGGCGCCACGGCGCGCCTAAGCTGCGGCGCCCGAATCGGCCGCCACACCTGCGGCGGGAAAACTATGGCGCGCCGTGGCGGCTTAGTCCACGCACCAAACAACCCCTAGGTTTAGGTATGTCATCTAGATATATCTAGTGACAAGCGTGTTCTTGGCCCAGTTAATAGCCATGGTTACTTGGACTCTGCAGTATGCCTAGTGCCCTAGTGAGAATTCAACATGTACCTGTTCTTTCCAAGGGTACATTCAGCTTCTGTGGAACATGAGTGACACACGGGGGATCCAGAAGTCAGAAGGCATACCGAAATCTGTCCTTTGATTTAATGTGGATTATATAGATGCTCATCACTCAGTCATGCTGTTGCATGGTGCTAAATATGATCTAGATCTAGGTCCTGGTCTGGATAATGCTCTCCACAGCATCTGCTGTGCGTGTGACCTGTGATCAGTTCAGTCAGTTGATCAGGTTGTAAATGACACTTGTTCCTCTGTTTCCGGCGCTTACTGCGCTGTTTCAGACTTAACCATGGCTATTATGAAGAGATGAAGCGTGGGTTTTTTTTGTCTGTCTACTTTATCGCATATGGGGGAGCTCTTTCCAGGATTTATATGCCATGTGTTTGTTCATGTACATGATTCATGTTCAATGAGTTGAATCCTCTTTCCAGCCTGCATACTGGTTTGTCGCGGCGAGGAAATTATTATTATGACAGTTTATGAACTGTGGCTGATGAATTGTTCAGTAATCAGTCGTGCTGTTTGGTTCACGAAATGTAACGTAAATTGTAACGGTAATGATTCACATTCGATTCGAGTACCAGTGGTAACAAATTTGAATATGCCGATATTAGTTCTTAGTGTGATTTAGTTTCTAGTGTGATATTTAATTACGGTTGGTCACAAACAAACATGATATAACGTTATTAGTTATCCATTACGTTACAAATATGTGAGCTAAACGACACCTTATTAGGCTGTTATTACCAGGATTGCAATTATCTCTTGCTGTACTGTCTCTGCGTTTTCAGGCTACATATGGGGTTTTGTGAGGCCCATGTTGTCTTGGTATGGGAGCTCTCTCCAGCCGGTGCGCATGATTAATCGGTTCATGTTCAATTAAATCCAATGTTTTTTGGCCAATATGTTGATCCAGTAAAGGAAATAGATGATAGACAACCCCCTGGACCATCTAATTATTGTTTTTCTATCTCTCTTTTTATAAGCCATTGATAAGATCAGAAAAGAATTTTTTTTGACGTGGTAGAAAGGAGAGAAAGGGAGGTCTTCTAACTTGGATGTCGCGGTGTTATCATTGGGTGTCTGTTTCGGTCTTTTTTCAACTTCTGGTCATGAAGTTGTTGTAGACTGATAAACGTCTAGCTTTTAAGTCTATTTTTGAGATAATTGTTTAAGTGAGAACAGTCTAAAATGAACACAAAATTTATTAAATCATCGCGACAATAGAATACATTATTTTTTAGGTCCTAAACCCTATAAAGTCCCTCAATTTTCTCACCACATAATTCCCATTATACTTAGATTTTCCTCACAATCAGATTTTTAAAAAAGCTTGTAAAAAAACTGAAACAAACAAGCCAATAGTGTTCAAGAGCACAGTTCGGTCCCCTCGTGATGAGGTGGTTATGGCTGGCCAAAACATCCGGCTTTGGGCCCCCCTACCTATTCAAGTCTTGTTCCATCTATCTCATGTGGATGGAAAGAGATTGAAAAAATTATAAAATATTTTGGTTTGCTTGAAATTTAAATTTATATGGATTGAGAACAAAACGAACGAACCCTCACATGGCAGATAAAATCAGTGCCTTTTCCCCCTCCATGGCAGCTGTCTGTACTGAAGCTTTGTTCCGCTGTGACCGATGGCTGCAGTTTCAAAGCGAAGATTTAAAAAAGAGGACGGTGCAAGAAGCTCTTCTAGGCAGAAGTTGGAACTTTAACAGCGGATGCCTTGAACAGCTTGGAATTACAGCCGGGATATTGTCCAGCGATCACTGATCAGGCGACACCTTTCATCAGGATGATTTGCTGATGTACAAACAGACAGACAAACAAGTGTGTTCTCATGGTCAATGTGCTTACGACTGACCATCCACTGCTTTCGCTTGCCACCAGTTCACCCTTTTCCGCACGTTTGTAATCGCGCGCGCGCGAGAGAGAGAGGCAGTGTACGGCTTGTCTTCCTCAGTTCTCACGTTTGCAATAGCGTTACCCCTGCACCTCTCTCTGCTGAATTGTTGAGCAAGACATCGGCACCTCCAATCAGGAGGAGATTTGTGATGCTTCCATGTCGTGA |
>gene2 |
GAATTCCCGTGCCGGTGGGGCCGTCGGCGACGCCATGTGTCGCCGCGCTATCGCCTGGGTCACACAAGTGTGCGGGTGGGTGGCCGCCACACGCTCGCTGCGCCTGCGTGCGTGTGCTCGCCTCCCACCCTCCCCGCACTAGCTCTGCACTTTCCCTGGCAGTCGTCCCTTGTTCCTGACTTCCTGCCTGAGCGCATCCGGCCACCTTCTATCCGCCCGCCAGTCCCCGCCGGCCTCCGCGGATCATCTGCCTGGGATCAAGATCCGTCGAGGCCGAGGCACCCGCGCGCCAAAGATCGTTTCTTGATCTAAATTTGGGTGGTCGTAGGGATCAAAGCTCGGTTCTCTGCGGTGCAGTTGAGAGGGGTAAAAGTTGACTCTGATTTGTTGAGGTGTCTGGGTGTGAGAGTCGGATGGGTTCTGTGTGAAAGCTGGTGTCTCTATAGTAGTTCGAAAGGTTGAGCAATTTGGTTTAGATACTGTGGCGAGGGAGAAGGAAGATGGTTTCTTGGTCAGGGGGGGCTTTAGCCTGTAGGGTTAGGGAGTAGTGCTGTTCATCTTATCTATGCTCTGTGTGCTGTTAAATATCTGAATTGGATTCTTTGTGTATTTTCCAATGAGAATAGTTAGTTGCATTATTTGCTCTCAATATAAGAAGGACGATAAGCCTTTGATCTAAAATATAATAATTACTTGGATCAAATTGGCTTTAGTTTCTTGATGGGTTGTATGACAGCATGTGCAGTTTAAGATTTTTGCTGTTGTTGTGAGGTAAAGAGAAAGAATAGCTAGCTTGATATGACTTCTTGGACTGTTCATAGTGTTCTTGTGTTGTTGGATTTGAAAGGCTGGCTAATTTGGTAGGTTAATATAGCAACCAGTAGTTATAACATAATTTTTATTTGCAAGATTAGAAAATTGTATTGAGTTCTTGATGCAGATTCAAATAGACTTTTTATTGCTGGTTTGATCCTTGTCCATAGTCCACACATAAAGTTGATTTTTTATCTAATTATCTGCACTTCATGATCTCAATCAAACATATGGTGCTTCTTGTTCATATTTCTTTTTCCAGCGAGGTTAAAAGTTTAGCTCGTTGTGGTATTGTGATTTGTGAGCAATTGATGCTTCCATGGTACAGCATCCTAAGGAACTCCATATTTTTATGTGGACTGTATTTGTGTTCTAAATTGTGATACCTTGCGGCTCAGATTAGTTGCCCTTTGTTGCTACACATGTTTTTAACTCTTTTGATTCTTAAATATTCAATTTTGTGATGCAGCACCAATATTCTTGGCATGGTGGCTGACACGGAAAGCTCAGATTCACTGCCTGGCAGTTCAAATGCTGCTTCTGAGATGCCTGCTAATGGGTTAGCCTCAAAATATTTTTTTGGATCCAGTTTTGTACAACTAATTTCATAGCAGTAATCAGTATTCACTACTACATCTGCTCTTAGTTAGCTACCTATATTGGGTGTACATAAAAATGCTAGCATCCACAGTCCACCAGATGATTATTATGTCCCCAACCTCTTCATTTCATCCACTGCAAGTAATAAGATCTGACCAAAATGAGCAGAGCAAAATTTAAGGTAGACTGTGATCTTGGAATAGATGTTGTAGAAGATACAGAAATATGATTTAACCAGTAGTTTATGGCTGAATCCTCTTTATTTGCATTCGTTCCTCTTGTTCAGTTTAATTCTTATCTTCACCTTTTTGGGGTTTTTTGGCTAATCATTTTGCTGCTTGTTCAGTTTCATGTCATATTGAGTTCTTTAATAGGCCAGTAAAGGGCCATAACTTACTTAAAGTTTATGATCGTTGAGAGAGACAGAGGAGGCTATATGCTATTAATAATCACTACCTCTACCTCATAATTAAAGCAGTGTCATCTGCTCCCATAGGCATATCAGTTTCACCTGCATGAATATAAAATCTAAGACTAGCCATCAATTCAAATGGTATGAAATCGCAGGAAGTTCTGGCTCTGTTTTCTTTTTTTTTCTTGGGTCTTAATTTCTGACCTCACAAAAAAAATGGACATAGAAAGTTTGCTATATATAAAACACAACCTCCATATATATACATTAAAATTACTAGAAGAAACCCTTGAGAACTAAAGAGTAAAGATTGTTTAGGACAAGAGCTGTGCAGATGGGTTCCGGTTCCTAAATCCTGTGTAGGACCTCTGTGACTGAGGCAGTCATAGAAAAGGTTTACAGTTAGGCACTTCCCACTCGCCACATTAGAATAAGGCCTATAGTTCATAGTTGTTAAGTGTTAACAGAATCCTAGTGCATTAAATTTCAATTAACTTAAATTAATATGTGTTGTTGTAGTAATTTGCACGCTATCGACACACAGTATATGTTTTGTTCAAAGTCTATATTTAGATACCTAGGGGTAAGGCTTGCCTCGGTTATTCATCCCCTAGACCCCACTTAGGGCATGGTCGGTTTAATTCCAATCCATGTGGATTGTATGGGATTGAGTGTGATTAAATCCCAAACAAATCAAAATCTCTCATAATTTATTTCAATCACAATCAATCCATATGGGATGAGAATAATCGAATAAGGCCTTATGTGGGAGGCCTAAGCACTGGCTCTATCCTGACCTAGGGGAGTTAAGATTTCCCTAGTCTTAGTTGACCTATTTTTACATTTGCACCTTCAGATTGTTCTGAATAATGACGCTGTCTATTCTTTCTAATACATATTTGCTCTTGTAGTGTGCTCCCTCAGCCTACTCGCCTTTTTTCCCGCTGCACTATTTTCCTGTTTTCTGAACAATTTTCCGCTGCAGGTCTATTCACCGAAAGTCTCAGGAAAAGCCCCCCAAAAAAACACATAAAGCTGAACGAGAGAAGCTTAAACGTGATCAGTTGAATGACCTTTTTGTTGAGCTCGGCAGTATGCTAGGTTAGTACAGTAGGTCATTAACCATTGACTATATGTAATAGACACAATTACGCTCTTGAGAAAGATATCGGTATCTGCGGTTAGATTCCATCATTCTGTTCTCCACTTGAGCTCATCTGGTAGACCGTTTTCAGCAGTTCGCCTATATGGTCACCTAAAACACCGTTTTTCACTGTAGAGTGGAGTTTGAATATAGATATGAAGATGAGTAAGCTGCTGAAAATAGCCTTAATAGTGGTTAGCATGATGTGACCTCTCAGTGGGGACTGAAATTATAACATACATTAGCTTATAAGTTGTTTACAGGATCCAGTACATAGTATATCTGCATCATTTTATATATTAGGGCGTGTGTGGTTCCCAGGCAGCTTTGCCTATTAGGCATCAATCTCAAGTTGTTGATTTTGGTTGCTTGGTGGACAGGATCGCTGCCTGGCAGATCGTGAACCATTTCTTCTGATTACGTCTATGGTTGTTGCCATGAAAAGAACTGCTAATCTCTCTACAAAATTCTTCAAAATTAATGTATGGTTAAGCTATTAATACTACGCTGTACTTTGAATGGAACACCATTGTGGATAGTTCTTGCTGATGTACCATGCAATCATGTTATTCTGATGACATAGGGATTGTCATCTGCTGAACTGCGTACTTATGATGAACACTGATGTTTTTTCTTTGTATTCTGTGCCATTAAATATGATTGCATAGTCATCCTCATATGTTCCTGTTGCTGGTTATCGATTTTGCTACAGATGTCTAAGCCATTGATCAACATAGTTCTGCCATTACAGATCTTGATCGACAAAACACTGGAAAGGCTACAGTGCTAGGTGATGCTGCGCGAGTACTGCGAGATCTAATCACTCAAGTGGAATCTCTCAGGCAGGAACAATCTGCTCTTGTATCGGAGCGCCAATATGTGAGTTTCCAAACTGAAGCACTTATGTTATGTACTCTTCATAAAAAAAAAAGATCAGCGTGATATATTCTGCATGAATTCTGATGTTTCTCAACTGATATACCACCAGATCCTCTACAGTCACCACTTGCCTTGTTCAGAAATATAAACATCTAGCTTGAGTTGATCCTCTAAAAGTAGGACACATTACCTGTTGTGAATCCTGTGACTGGTTCATTGAAACTGACCGTGGATGCGAAACTCAACTGATATATTCAATTGACTCTCGTCACCCGTTTCATATTCACTGCTCGCTTGATTTAGTTCTTTGGTAGATGTTTCAGCTTACTATCTACTAGTACCTGTTAAGCCTAAAGCACACTCTCATGGACAGGTCAGTTCCGAGAAGAATGAGCTGCAAGAGGAGAACAGTTCGCTCAAGTCCCAAATATCGGAACTACAAACCGAGCTCTGCGCAAGGATGAGGAGCAGCAGCCTGAGCCAAACCAGCATCGGGATGTCGGATCCGGCAACTCACCAGCAGATGCAGATGTGGAGCAGCATTCCCCACTTAAGCTCCGTGGCCATGGCGGCGCGCCCAGCAAGTGCAGCGTCCCCGTTGCACGGCCAGGAGGGCTACTCTGCTGACGCCGGTCAAGCGGGCTACGCGCCGCAGCCGCAACCTCGGGAGCTGCAGCTCTTTCCGGGGTCATCGGCATCGTCTTCACCGGAGCGTGAACGTTCTTCCCGGCTCGGAAGCGGCCAGGCCACGCCGCCGAGCCTGACAGATTCCTTGCCGGGTCAGCTCTGCCTGAGCCTCCTACAGCCATCTCAGGAAGCAAGCGGCGGCGGCGGCGGCGGCGTCATGTCGCGCAGCAGAGAGGAACGGCGGGACGGG |
>gene3 |
CTGCCCTGCGCGGCTGCGGTCGCCTATAAGGCTAGCCCAGGCCATTTGCCCTTTGCCCCCGTCCGTCCGTCCCTCACCTCACCTCACCTCACCTCGGCCCGCCTCCCTCATCAGGTAGCCGTAGCGAGCAGTATAGCACGCACAGCCGCCGCCCTGCCCTGCCCTGCCCTGCTCGGCGTAGGCACAGGCACAGCCCAGAGCGAGCGAGACAGAGGGAAAGAGACAGAGCCAGCCAGGTAAAAGGCAAAAGCACAGCACATTAAAAGAGAGGCCGGAAGCAGCGGCAGAGCGGAGAGAGAGAGAGAACTAGAAGCATATATGGCGATGCCCTTTGCCTCCCTGTCTCCGGCAGCCGACCACCGCCCCTCCTCCCTCCTCCCCTACTGCCGCGCCGCCCCTCTCTCCGCGTAAGCCACCTCCCTTTCGCCCGTCCGGGAAAAAACCCTCTTCTTCGCTCGGTTTATGCCACCCGGAGCCGTGCTGCAGCCTGCAGGTATCTGATGCCGCGAGCTTTGCCTTGCAGGGTGGGAGAGGACGCCGCCGCGCAGGCGCAACAGCAGCAGCAGCACGCTATGAGCGGCAGGTGGGCAGCGAGGCCGCCGGCGCTCTTCACCGCGGCGCAGTACGAGGAGCTGGAGCACCAGGCGCTTATATACAAGTACCTCGTCGCCGGCGTGCCCGTCCCGCCGGACCTCCTCCTCCCCCTACGCCGAGGCTTCGTCTACCACCAACCCGCCCGTAAGCAAGCACGGCCCCCGCGCCGCCTCCGCACCCCTTCACACTCACACGCACGTTTAACCGCTTTTGCACTGCACAACCCCGGCCGCCCGGCGGCGGCGTCCGTGCCTTGATCTGGTTGTTTACTCGGATCGAGGGATTCAGATGTCCTCTCCGTCCGTTTGTTAATCGGCTCCGGTCATTTCTTAATCTCGTCCTGGATTCGGTCACGAAAAGCTAGAGGTCAAGATTTTGCTCTCGATTACTATATCCTTGCCTCATGTTCTAATGGAGTTTATTTTATTGGTCTGATGTGATTAGATAGGATGCTAGCCAGGCTTGTCTCCGGCCAAAAGCGGCGGTTTAGTTTATTGATGATTGCTTCTTTCCTTGGGGGATTTATTCCTGTCTGGTTGTTGGGAGCCTAACCACGCTCCTATTGCTGCTGCGGTTTACTAACCATCTGCGCCAGTACACCTACTCCATGGACCCCAAAATACAGTTCTTCCAACCATTCCCCCCCTCCATCTGCTTTCTCGCGGGCAAATAAAAACGTGTAGAACGACGGTGTAGTAGGCAGATCTACTCCTTGTGCCGCTACGCTAGCCCGCTACCGAAGATCGGGCCCGTTTCAACCGGTTCGTTGGTCTGAGCGGAGCTAAGATGGGGCGCATTTCATTTTTTGGTCCTTTCGTCTGATTGGAGAAGTGCCCATTCCGGTATCGCTCCCCGGCCTCCAAATACGCACCGACACAGAACGTGTTCGTACGCACGTACACATGGTATGCGCACCGTGCTGCTGGCCATAGCCGTTGACTCACCGGGATTCACTCCTCTCTCGCGTGTGTGTGTGTGGCTTCCTTGCAGTTGGGTACGGGCCCTACTTCGGCAAGAAGGTGGACCCGGAGCCCGGGCGGTGCCGGCGTACGGACGGCAAGAAGTGGCGGTGCTCCAAGGAGGCCGCCCCGGACTCCAAGTACTGCGAGCGCCACATGCACCGCGGCCGCAACCGTTCAAGAAAGCCTGTGGAAGCGCAGCTCGTGCCCCCGCCGCACGCCCAGCAGCAGCAGCAGCAGCAGGCCCCCGCGCCCACCGCTGGCTTCCAGAGCCACCCCATGTACCCATCCATCCTCGCCGGCAACGGCGGCGGCGGCGGCGGGGTAGGTGGTGGTGCTGGTGGCGGTGGCACGTTCGGCCTGGGGCCCACCTCTCAGCTGCACATGGACAGTGCCGCTGCTTACGCGACTGCTGCTGGTGGAGGGAGCAAAGATCTCAGGTGAGCTTCATTATGTTTTCTCTGCAACCTCTGTCACGTATCCCACTGTTTAGTCCTAGCACATGGCGTAGTTAGCTCCCTGATCGGTGTCAGATGGGTCATGGCACCCGCTCGATGGGGGGGTGAATGCATGCTAATCTGTTGTGTGATGCACTGTTCCATCATTGCGCTAGATTGCCTTTTACGCTTTGCATTCAGAGTACTGCAGACGCTAGACAGCAGTGTGGATCAGATCGACTAGCGAGTAGTGCAGCACCAGAAGCACCTTTTATTATCTGCCCCAGTCGTTATCTGAGATCTGTCATCAGGCAAAGTAGTGGTAGCGAAGAACTGAAACATCTCTCTGCCTCTGCACTCGGTACTCTGCCAAAGAAAGTAGAAACACTCACACCTCTGCTTAGCCCCTCTGTGCTCGCTTCGATCTGGTCAATTCTTTCTGGAACCTGTGATTTCTCATCCTGAGAAGATGACGCTTTCTGGTACGCCAGATCGTGATGATGGAACACATCTGGGCTCTACGTTCAGAACTAGTAGTGCCTGCATCTCTATGTTCCTGCTCTGTCGTGTACTAGACATACAACATTTATTATTATTCTTCGGACGGCTGCTGTTTTTTTCTCCTTGCGCAGAACTGCTCACAGAAAACTGGCGTGTGTTTTTTTTCTTTTTTGGCCAGAAACTTCTCATCCGTGTGCCTGGAAGGAACCTAATAAAAAATCTGAAAGTTCTAGTAGCATGATAAATTGATAGTATCCGTTGGCCGTCTCATTTTGCACGCGAAGCTTTTGTGCAGCCGTCGGCACTTTGCAAATTTACAGTGCTTTACCCAATCTCAGTCATTGTAGGGTTACCTGCAGGGCACATGGTCTACGTGTTTGCTTACATGATTGGTCTTCCCACTGTTGTTTGTTGTTTCTCTACCTTTTGTCATGAATGGCCGCATGCTTTTTCAGAGAATTCCTGCTACACAATAGCACAACCAACAATACTACTGTTTCGGCAAAACATGGTTTGCTTGCATGGTGTGGCCAAGAGTTTGTCCTCTTGTTTGCCTCGTTGGTGGGTCATGCATGTTCATCTCTAGACTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCTTGTCCGGCGGCGGCGGCATGGACGCGTCAATGGACAACTCGTGGCGCCTGTTGCCGTCCCAAACCGCCGCCACGTTCCAGGCCACAAGCTACCCTCTGTTCGGCGCGCTGAGCGGTCTGGACGAGAGCACCATCGCCTCGCTGCCCAAGACGCAGAGGGAGCCCCTCTCCTTCTTCGGGAGCGACTTCGTGACCCCGAAGCAGGAGAACCAGACGCTGCGCCCCTTCTTCGACGAGTGGCCCAAGTCGAGGGACTCGTGGCCGGAGCTGAACGAGGACAACAGCCTCGGCTCCTCGGCCACCCAGCTCTCCATCTCCATCCCCATGGCGCCCTCCGACTTCAACACCAGCTCCAGATCGCCGAATGGAATACCGTCAAGGTAAAGCCGTCGATCCGTAGGCACACTTGTTTTTTTTTTCTTCTTTTCTTCAGGTTTGAGCCTTTCGTTCTGCGAACCTTCTTCTAAATTCCCGCACGGCCTTGCAGATGAACCTGAGTAACCATGCGGACCCCAACATCTCAGAGCTGACGACTCTTTGCTGCTGGCCTGGCCTCATCGTACCTTGAGGCGTCAAGGAATACTTCATTACCACTAGTATCATGCTCCTGGATTTTCGAACAATATATATATGCTTATGTACCGCTATTTCTCTCATCTTTTACACTTCTTTACCCGTTTGGAATTGTATGTTCTGCGTGGCACGGTTGTTCATTTGACCTTTTTGGATTTGATTGAAAGCTCCGTTTCTTGCTTACTCCAGCGCATCGTGAGCAATGTCCCTGTCTCCGCTGCATGTGAAAGAT |
>gene4 |
GAACAGTTGTGGGGCTGTGGGCATTCAATTGCTTTTGCTTCCTCCGTTCCCCCATCTTGCCATCTCCCCTTCCCCTGCTCCCCCGAAGCAGCAAGCCAGCCTGCCCACCCGCAGCCATCACCTCCGCCGCTCTCCACCATGAATCCGATCCACCAGCACGGCATCGTACCCAATCCTTCGTGACTGTTGCCTCCGCGCATCTCCGGGAGCAATGGAAGGAGGCCAAGATGTGTTCTTAGGTGCGGCGGCAAGGGCGCCGCCGCCGCCGCCGTCTTGCCCGTTTCACGGATCCGCTACCGCCACCCGCTCCGGTGGAGCGCAGATGCTCAGCTTCTCCTCCAATGGCGTAGCAGGTGAGATGTTGCAGATCTTTTCTCCTTTTCCTCTCCTTTTCATTTTCCTTTCAGTTTTTCCGTGGCGAAGATACTGTTGCATTTGTGGGGGCAGTGCTCTGTGCCTCTGTCTGAGCTGATCCCAGCTGTGATTGATTGCTTGCTCATGGGTCACGGCCATGACCATGGCATCCCCTCCTCTGCAAAAGCCCGTGCCTTTGGTGTCTTGTCACGGGCAAAAGTGGCGCATGTTCATTATTATCCCCCCTGCCTTTTTGCTTTCGCAAGCCCTGTATGTGTCCTGGCCATAAAGATGCAATCTTTATCCTCTATGCACATACTTCACCCGAAAAAAAGCTAAAGGGGTCACTGATTGGTGCTGCTTCCTTAAATCTTGCATGTGTGGGAACTAGGAGGCCATTGGTCACGGGTACTGTTCCCCCTACTGTTCTTGCTTCCCGTGTCCTGACCATTTCAGTATTCGTTCTTGTTACTGATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGAGGCCCTTCACTCCGACGCAGTGGATGGAGCTGGAGCACCAGGCCCTGATCTACAAGCACTTCGCTGTGAATGCCCCTGTGCCGTCCAGCTTGCTCCTCCCTATCAAAAGAAGCCTCAATCCATGGAGCAGCCTTGGCTCCAGCTCATGTAACTCTTCTCTCTACCTTTCGTTTATTTTTGTCAATACCTGAATATAAGGATAGTGAAAGTAAGACCTAAAACTGAGCAAGTAAAATGGTCAGCTAGGTGTAGATTTACTGTTGATCCAGTGCTCTGTTTCTTGTTTTGGCTTTATCTAGGATATGAGTGTTGTCATCAGTTTGTTTAATGAGACACATTGGAAAGTAACAAGCCTGCGCATAATAACAGTCTCAATGATTTACTAGTGTTAGAGACATGATTTAGATATAAAGCACTTGTTGCATTGGGATCTTGTTGTTCCTTATCTCTTGTGGAACAAGATTCAGAGTTGTCAACTTATCATCATTAGTCTGTTGTAATATAAGCACATCCAAATGCAAACTTGGCCACTTGATGATCTGATGTTTTTGTTGTTGCTGGGATACTGTTATACTAACACATTTTGGGGGTTGTTTATTGCATTCTCATTTGTAATGGGGACTCTTTTGCAGTGGGATGGGCACCATTTCGTTCCGGCTCTGCTGATGCAGAACCAGGAAGATGCCGCCGCACAGATGGCAAGAAGTGGCGGTGCTCTAGAGATGCTGTCGGGGACCAAAAATACTGTGAGCGACACATAAAACGTGGTTGCCACCGTTCAAGAAAGCATGTGGAAGGCCGAAAGGCAACACCGACCACTGCAGATCCAACCATGGCTGTTTCTGGTGGTTCATTGTTGCACAGCCATGCTGTTGCTTGGCAGCAGCAGGGCAAAAGCTCAGCTGCTAATGTGACTGATCCATTCTCACTAGGGTCCAACAGGTGAAGTCACCTGATCGTCTGATCCTGCATTGTTATACTCATTTCTGCCACTTAAGTTTGTGAATTTTTATTTTCTCAACATTTTTTTCTCGAACACGCAGGAGAACTGTGCATCATATATTAAAAGAAGTAAAAAAGTCTAAAGAAGACCAAAATCTGCCATAAAGAGGCAGAAAGAGATAGGAAGTGGGAGGGGCACCACCACACTATATTTTCTCAACATAAATGACAATCTATGGTTGATACATGTGCCAGTCTAGCAGTCAGGGTTCAGGACGTACCAAAACATTGAAAATGTTATATCCTTTAGACATTGAAATTTTGTCCATAGCCATTCATAGTTGAAAATTTTGTTCTTGATTTCTTTCAACTGGTCAGTGATTTCTTCATGTAACCTGTCATTGATGCATTCCATCTTTTGCCCCGTGCCCATTCCTATATATAAGATTTTATTATTATGTTTGTTTGTTCAAACAATTATGGTAAGCATGTGCAAAGAAAGGCAGTAGGAAGCACTATAAATAACTGAAATGATATGGTACTTATGTCAGTACAAACTTTAGAGATAGGTGAATTCTGTTCATGATGACCCTTTCAAATGTTGACGACTTACTATAGTCAGCAGTGAAAGAAAAACAGGACAGTGTTTCCTTTTCCTTCCATGAACTTGAAATGTTGACTCTGGTTTGCAGGAATTTGCTGGATAAGCAGAATCTAGGTGACCAGTTCTCTATATCCACTTCCATGGACTCCTTTGACTTCTCATCATCACATTCTTCCCCGAACCAAGCCAAAGTTGCATTTTCACCGGTGGCCATGCAGCACGAACATGATCAGCTGTATCTTGTGCATGGAGCCGGCAGCTCAGCAGAAAACGTGAACAAGTCTCAGGATGGTCAGCTGCTAGTCTCGAGGGAAACAATTGACGATGGACCTCTGGGCGAGGTGTTCAAGGGCAAGAGTTGCCAGTCAGCATCCGCGGACATCTTAACTGACCATTGGACTTCAACTCGTGACTTGCGTCCTCCAACCGGAATCCTACAAATGTCTAGCAGCAACACAGTGCCAGCAGAGAATCACACGAGTAACAGTAGCTATCTCATGGCGAGGATGGCGAATTCTCAGACCGTCCCAACACTCCACTGAGTGTTCATCAGGCTGGTCTTTGTTGGGACCACAAAATAACTGAAGCCATGTTGATGTCCTGAGTTTGCTGATACTAGGTTTTCAGTCGAGTCTTGTAACTCCTGTTTTAGAGTTGTTATATGTTCACGTCATGTTGCCTTTCATTTTCGGTTTCATTCAGATGGGTGTACTAATAATTTCTTTCCTTCTTACCTGTGAAGGATTTGAGTTCCAATCTGAGACGTGGGTTTGTTCTAACTTGGAGGTATTTATGAATATTAGGCACTTCTGGTTTCCATTGAAG |
>gene5 |
AGAACTCCCCAAAACACCCCCGCCCTTCGCACGCTGTCTCGGTATCTCCTCTGCGCCTTCTCTCTCTCCATCTCCTCACCAACCAAGGCACTCTCGCCTCCCGTCTTCTCCCCCTCTTCTTCTCTCTCTAGTTGCCAAATCGGAGCGGCAGCAACGACAGATCCAATACATATAGGTTCCATTGCATCACACATCAGTCACTCCAAAACCATCAAATCACACGCCCATCAGATCACACAGGCAAAGAGGAGAGAGAGAGAGAGGAGGGTGGGTGAGGAGGAAGATGATGAGAGATATATACTACTAAACTATCCATCCATCCATCAATCAGGTAGCCCGGCAGCAATCGCGTGCCGCCTTTCCACTCACGTACACCACCACCACCACCACCTCTCAGTCTCAGCACAGCAGTCGGCTCGGTTCGTTCGTTGCCGCGTCAAATCGGGGCAAGAAGCCAGCAGCTAGCCAGCCCCCCTGTCGCAGTGTTGCTTCGCGTGCCCTGCTGTCGTTGCTTGCACCGCGCACGTACGTACCTGGAGCAAGCTGCGGTCGATTGATCCACCGGTGGTTCGCTGTCGCTGCGGTCGGCATGTCGTCCTCGTCCTCGTCGTCCTCCGCCGCCACGGTGTTCCCGCCGTCCCCGCAGCTGCCGCCGCCTCTCCTGGTGGAGAACCTGCCGCCGCTGCATCAGCTTACGCCGCCGGTAGCCGCGGCGGCCGCGCCGGCCTCCGAGCAGCTCTGCTACGTGCACTGCCACTTCTGCGACACCGTCCTCGTCGTCCGTGATCGAATCCCTGCTCTCGATCTCTCCCCATATATGCACTGCACACACGACACACACACACGGACACATGCAGATGTACGCCCGTGTTGTTTAAATCCCAAAGATTTTACAAGCTCGAAGTTGTGTGTGGCTGGGCGGTGCAGGTGAGCGTGCCTACGAGCAGCCTGTTCAAGACGGTGACGGTACGATGCGGCCATTGCAGCAGCTTGCTCACCGTCAACATGAGGGGCCTCCTCTTCCCGGGCACGCCGGCGAACACAGCCGCGGCCGCGGCGGCCGCGCCACCACCACCACCTGCTGCTGTCACCAGTACTACCGCCACCATCACCACGGCGCCGGCGCCGCCACCAGCCACCTCGGTCAACAACAACGGGCAGTTCCACTTCATCCCCCACTCGCTCGACCTCGCGCTGCCCATCCCTCCCCACCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGAGCACGTCGTCGCCTGCTTCAAAGCTAGCTCGCTCTGATGTCATATATTAATTGCATGCTTAATCTTGTGCCCTCGCGCGCGGATGCAGGACGAGATATCCAGCGCCGCGAACCCGAGCCTGCAGTTGCTGGAGCAGCACGGCCTCGGCGGCATGATCCCCAGCGGCAGGAACGCGGCCGCGCTGCACCCGCACCCGCCCCAGCCCCAGCCGCCCGCAGCGGGTAAAGGGGCCAAAGAGCCGTCGCCGCGCGCTAACTCCGCCATCAACAGACGTGAGTTCGAGATCACCAGTCACCACCTAATAGACTCCCATTATTCCATGCACGTCCTCGCCGAGTGTTAATTATTCGCTGTTCCTAGCTCATCTCGGATTGTCCAAGTTTTTGCTTGGTTTCGTTCGTGAGACCGATCGTACGATCAGCCTGAGCCTGGCCTTGAGGAAGCTAGCTATTCAGTTGAACTCATCTTCCAGCTCCGTCTCCGTGCATGCTCGCCCTGGCCGGCTGACCAGATCAGTGAGCTCACGTACAGATGGGCTAGCTAGCAGCTAGCGACACATGCGCCTAGCTCGGTGTTGTACATGTCGCATCAATAAGTGCGGCGCCCAGTCGCCCACACCGCTGGCTGGCTCGCTTTCAATCAACTGTCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCACACATCTTTGTTTCGTTCTCGAGCTATATTCCTACTGTGGTGAGCACGGGCGTGCAGCTCAGTGCGCCGAGCTCTCCATAGCTAGCGTACATATACATCATGCTATATGTGTGCTGCCGAGCAGCTAGTGAGGAACACATGCACGTACTGCTAGCTGGTCGTGTTTCGATTTTCATGCGCGCGGCATATATATATGACTGTGTGTGTCTAACATGTTTCTGTGTGCGTGCCTCGATCGTGTCTCTCTGTCTCTGCAGCTCCGGAGAAGAGGCAGCGCGTGCCGTCGGCGTACAACCGCTTCATCAAGTGAGTGCCAGTATATATATATAATATGCCACTGCATTTTCCATGCTGTGCGTTACAGTGTGTGTAAGAAGCCATGGCCGGTGTGCCCCCGGTGGTTCTCTCGTCGGTCGCGGCAATGCATGCCGCCGAGCTCGTTGGCAGCAGCGCCGGGCGGCCCCCCGGGCCTGGTCCGGGGTACAGGGGCAGTAAGAAACTTTTGCAGAAGAAGAGAGAGACCCTGATAGTTTTTGCTCTCGTTCAGTCGTTCTCTCCTCTTCTCTCTCTCACACACACAAACACACGCAGAATGGCAGGAGAGAGAGAGATAGACAGAGAGAAAGGGATGTATGAAAGATCTAGCAAGCAGTATTCTTCGTTACATGTATACAAGACATGGCAAATGATGCATCGGTGATGGCAAATCATGCCAGTGTCGTGTCGTCGCTGAGCTAGCTAGCTAGCTGCGTGCTGATCATATGCACCGATCTGACGTCTCCCTTTTCCTTTTCTTTTTTTCTGCTGGCTCTCCCTCGGGGGCCGGGTGGAATGCGACTGCAGGGACGAAATCCAACGCATCAAGGCTGGCAATCCCGACATCTCGCACAGGGAGGCCTTCAGCGCGGCGGCCAAGAACGTCAGTGGATCCCTCTCGCTCCTCCAGTTCTTCCTTACAATTTGTGGCGTGATCCACTCGCGCTCTACTAGGGTTTTTTTGTTCGTGCCTGTACTGTTCGTTTCGTTGCTAGGGTTTCCCGGTCTTTCAAAACCGCATGATATATAAGCTCCATGCGTTGTTGTTTTTTTTCCCTCCTTTCTGAATCCTTGTTTGTTGTGGTGGTCTCTGTTGTTGCTGCAGTGGGCGCACTTTCCACACATCCACTTTGGACTCATGCCAGATCACCAGGGGCCCAAGAAGACAAGCCTGCTACCTCAGGTGATGAATTATTCCGTCCAAACCTTGTCAATTATGTACTGCTATATTTCCTCCGCTCACAACTTTTTTTGTTTTCATTTGTTTAGGATAAGATTTTGGTCAAAACTAAAAAACTACAAATATAAATTCCTTTTTATATCTTTTTACTCCATGTATTCCAAATTATAGGCTATTATGGTTTTTCTACGTGCACAGCTTTAATTATATACATAGACATAATTGCATATCTATATATGTAGCAAAAGATTTGTGTGTATGAAAGGTAAAATAACTTATAGCTTACAATTTAAAATATATAGAGAGAGTAGTTTGGAGACATGCAATATATATGGGTAGATTTATACTAGCTCTAGGTCAAAATTTACAAGTCGCTTAGGACAACAATATGGTCTCCAAAATTATAACTTTGACCAATGTTTTTTGTTAAAATACAAATGGTCTCTTAACATATTTATACTTTTGTAAAAGTATGTTTTAAGATAAATCGGTGGATATGGCTATTAGGTTTCAAAACTAAATAACAACATAATTATTTGTAGTCAAAGTTTTACAAGTTTGACTCAAACCTTGTCCATAACAAATTATAATTTGGACCTGGAGAGAGCATGTGAAATACTTATCAACTCTTATTTTAGAGGATTTTTAATGATATTAGTGGTCATGCATATGCACCAAATTGTTACCCTTTTAGTTCAATAGCAACATTGAAAACTGAAAACAACTACAAATTAAATGGATTTGTTAATGTGGCCGGAATTTTCCTTGCAAAAACAAGAGGTGAGGTTGAGGGTGATCCCTAATACTTCTATAGAAGATAAGATGGATCTTTCTGCTAAAATGTTTTTACCGTTCTTGGTTGTGACATTTTTTTGAAGTGATTCTTGGTTGTGACATTGACAGATATTTTATGCAAGTTTATGTTTCCACAACAATTTGTATTAATGAATTGAATATATTATGGAAATATTTATAATAAAGTACATGTAGTTTTTTATGTTAATCTGCATGATTATATATTAATATAATGTAGCTCAAAATTTCTCTGCTGTTTTTGTAACTAGAAAGAAAATTAGGGGGGTCTTAATAAACCATCCATCAATACAAAATCTTGTACATAAAGTTTTCATAAATTTATCAGCTCAAAGGACTAGGATGTGCATGGGTAATTATATGGTTCAAATTTAGGGTGACCTCCTAGATACCAAACAAGTAAATCTCTGCCTATTAGATTAGCATTGGAAATTATATGGAATTCTGCTTTTGTTCCACCAGTACATCGAGAGAAAAATGAGATAGGCAAGAAAAAAACATTTTTCATGCATATAGCTAGCCACTATATATATGGTACTGGTACATGCCAGATTGCACATACATTTCTTGTATGACTCTCTTATATAAGGACAATATAGGAGTAGTTAGCTCAAATAAAAGAATGCATGATATCATGAATAAAAATATTTACTACTAGCTAGTAAGCACGTTTAAGCATTACCACCATGCGCGCGCGCCCAGCAAATCACACGGTTAGAACGATTTAATTAAGCTAAACCATTTTTTTTCTGTGCTTTTGGCTTTAACAGGATCACCAGAGAAGCGACGGCGGCGGGCTACTAAAGGAAGGGCTGTACGCTGCGGCAGCCAACATGGGGGTTGCTCCATACTAATATTAGAGTAGCAAAGCTGCTACGTACTGTTAGGGCTCTATGGACTACTACGAAGCTATGGACGTGTTTGGTAGGCTGCATATGGGCCGGCCAGGCTGGTAAGATACAGCGTACGCTTGTTTGGTTGCTTGTCTCTGTATCTGGTGGGCTGAGGGGCGGTGTTTGGTTGCCTGTATGTCTGTGCTCACCTGCACTGCGGGATGCAACATCTCGCTGTGAGCCAGGCTGTGGAGAAACGAGTTTCATTTCTGTATCTCGGGAGCCAGGCCCTGGCTAGCCTGTTTGGAGCGGGCAGGCTCCACTGCGAAACGAACCAAACACGCCCTATATGTATCTAGCTAGCTAGGGCTGTTACGTTAAGTTAGACAAGGCCGGGCTTAGCGTGACCTCATAAATTGGCTTGTTAAA |
>gene6 |
ATGGATTTCCCGGGAGGAAGCGGGAGGCGGCCGCAGCAGCAGGAGCCGGAGCACCTGCCGCCGATGACGCCGCTCCCGCTGGCGAGGCAGGGGTCGGTGTACTCTCTCACGTTCGACGAGTTCCAGAGCTCGCTCGGCGGGGCCGCCAAGGACTTCGGCTCCATGAACATGGACGAGCTCCTCCGCAGCATCTGGTCCGCGGAGGAGGTACACAGCGTCGCGGCCGCCAGCGCGTCGGCGGCGGACCACGCCCACGCCGCCGCGCGGGGGCCCGTGTCCATCCAGCACCAGGGCTCGCTCACCCTCCCCCGCACGCTCAGCCAGAAGACCGTCGACGAGGTCTGGCGCGACCTCACGTGCGTCGGCGGAGGACCCTCCTCCGGCTCCGCCGCGCCCGCAGCGCCGCCCCCGCCGGCCCAGCGGCACCCGACGCTCGGGGAGATCACGCTGGAGGAGTTCCTCGTCCGCGCGGGCGTGGTGCGGGAGGACATGACGGCGCCGCCGCCCGTACCGCCGGCGCCGGTGTGCCCGGCTCCTGCTCCGCGCCCGCCAGTGCTGTTTCCCCATGGCAATGTGTTGGCTCCCTTGGTGCCTCCACTGCAATTCGGGAATGGGTTCGTGTCGGGGGCTGTCGGTCAGCAGCGAGGTGGTCCCGTGCCCCCCGCGGTATCGCCCAGGCCTGTGACGGCCAGCGCGTTCGGGAAGATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGAAGCCACCGGCTATGGAGAAGGTGGTTGAGAGGAGGCAGCGCCGGATGATCAAGAACCGGGAGTCGGCCGCGAGGTCGCGCCAAAGGAAACAGGTAAATACATTTGTCGGTGGGTTCTGCCTTTACCTAGTTGTATCAATTCGTCACGTTTCCTGCTTATATTACTAGTTATACTGACACGTGTAACGGTGTAACTTTAATGTTTATGTTTTATTTTTTTCCTCCCAACATGTTAAGTATTTCGCAATAATGGTGTTAAGAATTCTGTTGGGCCATGTGTCTAGTGTTGGCCCATTAACGTGTACACATATACTAGAAGTGTGTGTGGTGTAGAGAGAGTGCTGTATGTTTTCCACATTCCAGAAAAATCCACATGGTACCGGAGCCAGGCTCAACGGCGATGGCGTCGCGGTGACGAGTGTCTTCGGCCTCGACGGAGAAGACCACCGAGAAGGAGATCAGCGACGGCCGAAGGAGGCCGCCGAGGCACACGAGCGATCGAGGGAGGCGAGGGACGTGACCAGGCAGAAGACGGGCGAGTACACCGACGCCAGCAGGGAGGCCGCGCAGGAGGCCAGGGACAGGTCCCGAGCCACAGCACAGGAGGGACGCCACCGCCGACAAGGCGAGGGCGGCCAAGGACGTGGACGCGGGCACTCGTCGGCGACAAGGATCTGGAGATAG |
>gene7 |
ATGCAGCAGGACCTCAGAAACTCAGAGAGAAGAAACCCGGAACAGGCGCATCCAGTGATGTCGGCGAGCTCGACCAACTCCGCGGCTTCCCCGGCCGTGTCCGGCCTCGACTACGACGACACGGCGCTCACCCTCGCGCTCCCGGGCTCCTCCGCCGAGCCCGCCGCCGATCGCAAGCGCGCCCACGCCGACCACGACAAGCCGCCATCCCCAAAGTCTCCCTCTCCCTCTCCCTTCCCTTCTCTTTATTCCTCTCCGCGTGTGGACGACAACTGGACACACGACACGACGCCCACGGACCGCTTTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGGCCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACGAGGCCAGGCTCGTGAAGGTGGCCGTGGACGGCGCGCCGTACCTGCGGAAGGTGGACCTCGCGGCGCACGACGGGTACGCGGCCCTGCTCCGCGCGCTCCACGGCATGTTCGCCTCCTGCCTCGTTGCCGGAGCCGGAGCCGACGGGGCGGGGCGGATCGACACCGCCGCCGAGTACATGCCCACCTACGAGGACAAGGACGGCGACTGGATGCTCGTCGGAGACGTCCCCTTCAAGTAATTCACCGTACCCACCTACCTGACCTCGAGCTTGTTCCTGCTATAGTCTGCTCCCCATCCAGTCCAAATCGGTCCGTGGAATACCTGTTGCTCTGCCAAGTGTGCTGATCCCTCTCTCACACACACATGAACGCAGGATGTTCGTGGACTCGTGCAAGAGGATCCGCCTCATGAAGAGCTCCGAGGCCGTCAACCTATGTAAGACAAGACCCCAAATCCATGCATGTCCTAGCTACTACTACTACAAGACGCTACAAGATATCGTCGTATAAGTAAAGTACTAACATTTCTTCTTTGCGTTGCTTGATGCAGCTCCGAGGACATCATCCCGGCAGTGATTGTTGTTGGTGTGGACGCCATATGCCCTACGCGGCTTATCTCTCCGAATTAGTTCACAGAGTGTGTGCTGGAAGAGGCTTGGCTGCTCAGGTCCTCCATGCACACGTCATACACCGTACGTAGGGTGAGGGTTCAGTCTGTTGCTGTGTGTTCTGTACAGGCCACACCACACACGCCCCCATGGAAAACTTTTTCAGTTTCGAGTGCCCCTCCCTCTCGGCCGGACGGTTTGGTTTTTGGACGACGCCGGCGAGGAGGCGGCGCTAGCACACTAGTAGCTCCGTTTCCGTGTGTTCTTTCATACTTGGCTTTGGTTTCCGTTTCAGTCTTCGGCCCTCGGTCGTCTTGTCTCGACTCTCGAGGGATCCATGTATACACGAACATGGTACATGCTGTGTGCTGTTTCCATTGTATAAGGTCAAAGAATACAAGTACGATCTGTCTCTGTTCTTGTAGTTTCGGCGGCAGCCTGATCGTCTGGTCGTTTGGCTTTAATTTATACCGACTTCTATTGATTATAGAGTGTTTTGTCTCTATAGATTATAG |
>gene8 |
TTTGGGCGCGGCCGGGCGGGCAAGCTGCTAAGGTACCAGCATACCACCCATCCATGGCTTTCCTGGTGGAGCGGTGCGGCGAGATGGTGGTGTCGATGGAGAGCCCGCACGCGAAGCCGGTGCCGGCGCCGTTCCTGACCAAGACGTACCAGCTGGTGGACGACCCCTGCACCGACCACATCGTGTCGTGGGGCGACGACGACACCACCTTCGTCGTGTGGCGCCCGCCCGAGTTCGCCCGCGACCTCCTCCCAAACTACTTCAAGCACAACAACTTCTCCAGCTTCGTCAGGCAGCTCAACACCTATGTACGTACGTAGTAGTATTACATATACACACACAATGCATTGCATTGCATTGCATTGTACTGCATGCATGGTTTCAGTTCCCTTGCTCGATCTTGTTTGTTTCCTGCTAGCTCTACAATGTGACAAGATATCACAAGCAAAAAGTTCTCTCTTTTTTTTTCTCGTCGGATTTTATTTATTGGTTGTTGGACTACTGTGTGTGTGGATGAATATACGGCAGGCACCGCACAGGCATTGGTGTGACCTGCCAACGACTAGCTAGCCAATCGGTTGGTTGCATGCATTCATGCTCCCCTCTCTGTGACAGGCAGATATGTATGTAGCATGCAGCATTTAATTTGTGTGGTTTGCATTTGGGTAGAGAAGAGGGAAGAGCACACGACCGCATGTGTGTGCGCCCGCACCAGCCGTTCGTTCCGCATGCGGGCCCGTCCCGTGTTCCTGGGCCATAGAGTTCGCGTGATGCTTGCGTCGCCCGCGCCGTGGAGCTAGCTCTCTTCTTCTTCGTCTCCGACGGGACTTAGAAAGGGGGGTCGGAGGAGGTAGCTAGCTAGATCCGACGGCGTGGACGAGAGAGAGATGGCAGCGAGCTTAGGCAGAGGTAAAGGAACTTAGAAAGGGGGGGTTCGTGATGCCGCCGGAGCAGGTGGAGGAGGAGACAGTCCGACAGACAGGGCTGGAGAGGTGATGGCGACCATGGCTATGGCGCGGGGGAGGAGGAGGAAGGAAGAGGTCGCCACGAGCACGCCGTGGTCGCGACAGTGGTGGCCACATCCATTCGGCTTTCTGGTTGCTGTTGACTTGTTGAAAGGGACTTCATTCACTTGCATTATTACTTCGAGAGTAAAGGATATATACATGCATACAAGGTTTAATTTACAGCCTTTAATTTCATAACAACAGTCAAAAGATCTTTTGTGTGTGCGTGTGTGTGTTTGATTTTGTGCCAAGATAGATACAGTACTGTTTGGGTACTAGAAGAATCTCATCAGCCTTCGTGTGCGCTAGTCTCATTCCCAATCATTGGGAGAGGAGAGGAGAGGATTGTGCACAACGAAATTAAAAGAGAGGAGAGAAATATATACCCTATGGTATTCTGTGCCAAGCAGTCGTATATACCCTTATACCTGTAGTACCATGCATTAGCACCACAACACACGCGTGACATGACTAGCAGCGCTGAGCTGACTACACAGCAGTACAGTGGCACACACAGCTGCAGCAGCACTGATCTGATGAGCATCGTCCATCGTCATGGACACCACGTACTGGCGTACGTCTCTCTCTCTCTTCGCATTGCTAGCTAGATGATGCATGTGCACGTACATCTGCCATGCATGGTCGTAGCCGCAATTGCAATGTGTGCTGTTGTGCAACAGTGTCGTCGTCGATCTCTGATCTCATGTCATGGTAAAGAATGCTAGCTAATAACACAACTTGATCACTGCAAGAAAAGAATGCTGAATATTTTTTTCTCTTTGGTTTGTTGCTGTTGTTGTTGTTGGCTGATGCAGGGCTTCAGGAAGATAGTGGCGGACAGGTGGGAGTTCGCCAACGAGTTCTTCAGGAAGGGCGCCAAGCACCTACTCGCAGAGATCCACCGGAGGAAGTCGTCGCAGCCGCTGCCGACGCCGATGCCGCCGCACCAGCCCTACCACCACCACCTCCACCATCTCCACCACCACCTCAGCCCGTTCTCCCCGCCGCCGCTGGCACAGCCGGTGCCGTCGTACCACCACCACCACTTCCAAGAAGAGCCCATCGCCACCGCCACCGCGCCGCACGGCGGTGCTCAAGCCGGCGCCGCCGGTGGCGGCAACAATGAAGGCAGCGGCGCCGGCTCCCGGCGGGGACTTTCTGGCCGCGCTGTCGGAGGACAACCGGCAGCTGCGGCGGCGCAACTCGCTGCTGCTGTCGGAGCTGGCGCACATGAAGAAGCTCTACAACGACATCATCTACTTCCTGCAGAACCACGTGGCCCCGGTGACGAGCCCCTCGTCGGCGGCGCACGCGTCCCTGCCCAGCGCCGCCGGCGGCGGCGCCGCCGCGTCCTCCTGCAGGCTAATGGAGCTGGACCCGGCGGACTCCCCATCCCCGCCGCGGCGGCCGGAGGCGGACGACGGCACGGACACGGTGAAGCTGTTCGGCGTGGCCCTTCAGGGCAAGAAGAAGAAGCGGGCGCACCAGGAGGATGGGGACGACGGCAACCATGAGCAGGGAAGCAGCGACGTC |
>gene9 |
ATGAACAAGTTGGCATCCTGCTTCCTCCAGCACGGAGCACCACACACCCAAATCTTCAAGTCCTACCATGTTCAGAGATCCCCTTCGCTGCAGTTGCTTGAGAACCGATCCGTTTCCATGACCCGGCACCGCGCCGCGGACCGTGCTGCCAGAGGCACCATCATCGACGTCGCCGTCGACAGTGGCACCAGCTTCGACTTCGAGAGCTACCTGTCGGCCAAGGCCAGGGCCGTGCACAACGCGCTTGACCTTACCCTGCAGGGTCTGCGGTGCCCCGAGGTCCTGAGCGAGTCCATGCGCTACTCCGTTCTCGCGGGCGGCAAGCGCCTCCGCCCCGTGCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGCGCCGTCGAGATGATCCACACCGCGTCGCTCATCCACGACGACATGCCGTGCATGGACGACGACGCGCTCCGCCGCGGCCGCCCCTCCAACCACGTCGCGTTCGGCGAGCCCACGGCGCTACTCGCCGGCGACGCGCTGCTGGCGCTCGCTTTCGAGCACGTCGCCCGCGGCAGCGCGGGCGCCGGCGTCCCCGCGGACCGCGCGCTCCGCGCCGTCGTGGAGCTCGGGAGCGTAGCTGGCGTCGGCGGCATCGCCGCGGGGCAGGTCGCCGACATGGCGAGCGAGGGAGCCCCCTCCGGCTCCGTGAGCCTGGCCGCGCTGGAGTACATCCATGTGCATAAGACGGCGCGGCTCGTGGAGGCCGCGGCGGTGTCGGGCGCCGTCGTCGGGGGCGGGGGCGACGGCGAGGTCGAGCGCGTCCGTCGGTACGCGCACTTCTTAGGGCTCCTGGGCCAGGTGGTGGACGACGTTCTGGACGTGACGGGCACGTCGGAGCAGCTCGGGAAGACGGCGGGCAAGGACGTGGCCGCCGGCAAGGCCACGTACCCACGGCTGATGGGCTTAAAGGGAGCGCGCGCATACATGGGCGAGCTCCTGGCGAAGGCCGAGGCGGAGCTCGACGGGTTGGACGCCGCGCCCACGGCGCCTCTGCGGCACCTCGCGCGGTTCATGGCGCACAGACAGCATTGAGATGGGCGTGGAACCGTGGAAGTGGAACTGGAACTGGCCGGCTCATCGGGAACACTTGAGAAAAGTGATGCGTTGACTATTAGCTTCTCAGACCTCAAGACTCAAGATCGAGTGATTACTTTGCCCCAGCCCAAAAGGATTTATGGGCTTCCGAGTTGAGTGACACTGCAGTTTGCCAGTGGCATGTGGCAACCTACCTAATGGGCCGTTCACGCCTTCACGGACAAGTAGCCTTTATAAGTGCGGTTCTTACTTCAGCTTCCCTTACTCCTATCGTTAAATAAATCTCTATTATATAAAAAGACCAGTTTTTCCAATTCCACGTTTCCGCGTGCTTCTCCACATTTAAATGGCAAAAAACTAAACTTATACAAAAATTAAGATTTAAACTATGATTATTGACTCTAAGACACACATTCACATCTAACTAGCCAACAGAGCACACATGTCTTTGTGTTTTATATTTTATATTTATAAATGGAATCTATAGCAACGTGCATGCACTTTGCTAATACTAGTATAATGCATATGCACTACGATGGCACACAATAATATTTAATACTAATAAAAAATAATTTAATGTCACAGTGAGCGGGTCCACATATTAGATATTAAACTAATAAAAATAAATGTTACACCTTATCTTAGCCAAAAGGTCGATAAAAGGTATAGGTTGAAAAGGAGTCTGACCCTTTTTAATAGCTCGCTCGATCGTTCATCCTCCTTCAGGTAGCGAGGTGGTACTATGTGAGAGTTGTTGGGAGCCTTTATTGCCGAAGGTCCTCAAAGTACAATATTGTCAATTAAGTATGTTTCGGGTGCTCTCAAAGGATGTGAAACTCACCTTCGTAAGGGTTGGTGTCTGAAGGAAAAACGAAGCCAAGAAGCTTTGGCTCCATGGAGGCAATGCACCAACAAAATCCAAAGGAGAAAGCTTCGACTTCCTGAATGCCGAACGTGATCTACGAAGCTAAAGCACAAGAGAAGGATCTAGAAGATTGACCAGATGGTCAAGAAGGAGAAAAGAACGATGTTGTCCTCATGAGGCCTGTAATTCATATGTATAGGGTGTGCGAGTATTTTTGTAATTTCATACGAAGTTGTACCTCACCACTATAAATATGAGAACAGTGTCATGCATAAGGACACTTTTCGAACACAAAGAGTCTTCACGCTCTTCCTCGTAAAGCCGAAATTATATCTGTAACTAATCATTATATTGTATGAAACAAAGTGAAGCAATAAAATATCACGATGAGTAATTCATTACATCTCCCATGTTTGTGATTTACTCTTACTATCATCTTTTCTTGTATCCCTAATCTTCTCCCTTTAATTAAGCTCAAAGATAGTAGTTAATTAAGGGTGAAGCTCAAGATTTAATCATTCATGTTGTCTTGTTTTTTATAAGAAGTCAAAAACAAGTGACCAATAGAAACGTTGTCTTGCGTGTGGATTCCTATCGTGTTGGATATGTATGGTTTTTCATAGCCTATCTATGGTATAAGGGATCATTGTTAGGTGAGAAGTGGGAGAGAGGAAGAAAACCATGTGCTTCAAATGTAACGTGCGGGCCCACGAAACTGAAGCTTTAAACACGCATAAAAAGATACTCATTCCGTCCCAAAATAGTAGTCGTTTTAGCACTTAGTTTTATGTCTATATTCAAATGGTTGATAATAAAATTTAGACACATATATAAAACACTTATACTAACTATTGCATGAATCCATTAATTATCTTTTTACATATAAAAATCATGTACAACAAACCAACAAATCGATGTAATACAAGAAGGACGCGACCAACCATTTTATCATATCCTTCTATGAGCCACGAGGCCCGACATGTGTCTCTGGATGTACATTATTCTCTGAAGGAGGCGCATACCTCATGCTATAACTAGAGAACGAATTCCTAGTATTTCTCGAGGTATATCTCGACGAAGTACTCTCGTAATCATAAGAGTAGTCATATCCATGTGTAGGTAGGCTTGGAGTCCTTTTGCCCCATTCCTCGTCTTGTGCCTCAGCTTCCTCTTAAATAAAGGGAAGAAAAACAACAGTGTACTCGTCAGACACCTACCTCTTCCTGTGGTCAAAACAATTCTTTTCGGGACTTTCCAAGACCAATATCGAGTATCGACCATTGTAAGATTGAAAGAAAAAGTGTGGACCAGTTCCTATTCAAGATTATATCCAAGGGTGGCTGAATGAAATTCAATTTTGGTGGCCTTTCGAGTGTGAGCTCATGCTGAGCGAGAAGGCGATCTCTACCCCCACAACCTAGAGCATCAATGGGATGTCCTGCAATCCCTCTCCCTAGACCTAGAGCGGCGCCTGCACTCCCTCGACCAGGAACTTATCGATGGTGACAAACCTCGGGTGCCTTCTTGAAGGGCATGTCCATGTCTAGACTCTAGACCATAAAGGGCCACATGGTGGAGATATGCTATATTGCTTGTGCAGGAAAGTGGGTCTACTTAGCATAAAACTAACACCCTTCACAAGTGCGAATGATTTGCTCAACGTCTGCCACCATGGTTGGCCAATAGAAGCCTTGTCCGAAGGCGTTTCTAATGAGGGTCCATGACATGATGTGGTGGTTGCACATCCCACCATGGATGTCTTGCAGCTGCTATTTCCCTTGCTCGGTCGGGATACACTGTTGGAGTATTTTGGTGAGACTCCGCTTTCACAGCTTGCAACGCTTAGTCGTTGGGTCTTTGTCCTATTAGTCGGGAGTGTATCACGAATGATGTAATGATGGTAAGGGGTTGTTGGTCACTTGTTTTTTATTACTGTACGGAATCAAAAACAAGGCAACACAATGTTAAGCAATAGGGGCATTCGTCCTTAGGGGCATTATCTCTCTGAGATAATGATCCAAGGACGAAGGCAATGATGGATGCTTGTTTTTAATCTTTCGGGATGTCAAAAACAAGTTAACATAAATTAGTACGTCGTCCGTTTCTTCTTTCATCTAACCATTTTCAAAGGTCATATGAAGGAAGAGGGTTACAAACAAAGAAGGTACATATGTATACTTATAAACGTAAAGTGCAAGCAATAAAGGACAAGTTCTTTATCTTATTTGTATATTCATCTCAGATTTCATTTCTGATAATTTAATAAACAGTTACATTCATACCTTCGACTTTACATGAGTGAGGGTTCGAAGGTAACTTCGAAGGATGGACCAATGAGAGTGTTATCTCTTCTCCTTCTTCGAAAAAGATCCAAACAGTACAAGGCATCGTTCCTCTATTTATAGACTTAGGACATAGCTCAAGTAAATTTACAACTATATCCTTGATTTCTTAGACATTCATTCTAATGTACATGTCGAGGGTAAAGTTGTCCTTCTATTCCTTTTGACTCTCCCCCAAAGGACCTTCGGAATTAGCTTCGTCCGAAGCATGTTCACAATGATCGCTGAAGCCTTGGTGCGCTCCTTGCTCGATACCTACCTTTGGCTCTCCCCCTTTGGCATTTAGTCATGTGGTACATTTGTTAGAAAAACAGAATAGTTACTATGTTTTGAGGACCTTCGAAAGAAGGAGACGCCCAACATGGGTCCTATAAATGGTAAGAAGATTGAGCTCTACAATTAGGTTAGCCTCAGCCTCCATGACTTAGGTATCAGGCGACGTCAACGTTAGTCAACCCATGAGCCCTTGCGAGTTTGATGTTGGAAGGGGTCAATGGTTGGTCAGCCCTGAACCCTTTGCTAGAGGCTCGTTGCTAGCCTACTCCGGGTCCTTGGCCGAGGGTTGAATGAGTCACTGTCAAAAACATCGGTTAGGATGGGATCCTGACATGATGCCATTTTAGCTAGGGTGTTCGCTAGTTCATTGAAGCACCTTGGAATGTGGTTGAGTTCAAGACCGTCAAACTTTTCCTCTAGCTTGTGAACCTCTTTATAGTAAGCTTCCATTTTGCATTGAGGCAATTTGATTCCTTCATGGCCTGCTCTACCACAACCTCGGAATCACCATGGATGTCCGGTCGTCAGATGCCAAGCTCGATGGTGGTGCATAGGCTATTGACGAGTGTCTCATACTTAGCTATGTTGTTTGATATGGTAAAGTGGAGTTGGATTGCGTATCCATGTGTACCCCCAAGAGGGGAAACAATGACAAGTCTGACCCTTGCACCGTTCTTCATCACTGACCCATCGAAGAATATTGTCTAGTACTCCTGATCCATAGTCGTTGGTGACATCCTTGTTTCAGTCCATTTAGCAATGAAGTCTACAAGTACCTAGGATTTGATGGTAGGTCGAGGGGCGTACGATATCCCTTGACCCATAAGCTTGAGCGCTCACTTGGCGATCTTGCCAGTAGAGCCCTGGTTTTGGATGAACTCACCGAGGCAGCAGGATGTCACCACCATTACGGGAAGCAACTCAAAGTAGTGGTGTAGCTTTCTCTTCACGATTAGGACCACATAGTGGAGCTTTTGGATCTTTGAGTAGCATGTCTTGGAGTCCGACAAGACCTCACTAACAAAGTATACATGGTACTAGATCTTAATGATATGGCCTTCCTCTTTCCTCTCATCAATGAGGGTCACGTTGACCACTTGCGAGGTGGTTGCGACGTACAAAATGAGTGGATTGTCGTCAGTCGGCGGGAGCAGTATATGTGCATTTGTCAAGATTTTATTGACTTTGTCAAACACTTCCCAGGTCTCTAGGTTCCATGCAAACTAATTAGATTTTTTAGGAGCTGTTAAAGAGGGAGTCCTCTTTCATCAAGGTGCGAGATGAAGGGGCTTAGTGCCGCTAGACACCATGTGATCAATTGCACTTAGGGCTGGACAAAATGCTCGTGGCTCGCTGGCTCGCTCGTTTCGTGGTCAGCTCGGCTCGGCTCGGATCGGCTCGTTTGAATTTTGTCACGAGCTGAGCTGACATCCTAGCTCGGTTCGTTAACGAGCCAGCTCGGTTCGTTAACGAGCCAGCTCGCGAGCTAAACGAGCTACCATATTCTAATAAAACGAAACTATATACATATCATTTATAGAATAATTGATGAACATGTTATATATATGTGAGGTGTCTACGACCTATGAATTAAACTAATGATTAATGAACTATGTCTATGTGTTAATTTGGTCTATGCAAATATAATTATGAGTTAAACTGATGAACATGCATGTGAATTGTGAATTAATGAGTGATGAATTGTGCTAATTTGGTGTTATATTGACATGGTTTGTGAAACTATGAGTATAATTACTATTTTTTATTGTTAAATTAGTTTGAAATTAACTAAAAAATAATTATTATATACATTTTATTTTTTTTCTGCTCTGGCTCGCGAGCTAAACGAGCCAGCTCGAGCTCGTAAACGAGCCGAGCCGAGCTGACTCTGTGGCTCGTTACCTTAACGAGCCGAGCCGAGCTGGCTCGTTAGCTTAACGAGCCAGCTCGAACTTGGACGAGCCGAGCCGAGCTGGCTCGATATCCACCCCTAATTGCACTCCATTCATGTTCTAAATCGGCCCCATTTGTGTCATCATTGCAATCTTCCCTGGGTTGGCTTTGACGTCGCGCACAAAGACGATAAGTTTGAGCAACATTCCCCTTGGGACTCCAAAAACATGCTTCTTAAGGTTTCCTATTTATCCGAAAGTGGTGCGCTGATGTGCACCACCTTTCCCTAGGAGTTGTCGGGGCCAACAAGGACGTCCTTGGCGCCTTCAGCAAACTCAAAGGACCCGACCAACTTCATGGAGTCAAGGCATCCTTGACCACTTGTTCATGGATGACTGCAAGTTCCTCGGATGGAACAATCTTCGAGGTGAGCTCATAACTTTCTATCTTGCGCTCATAAACATGTTAGAATGAAGATCTGATGATGACAACACCGGTCCTGATAGCTTAAGCTTGAGGTTGGTGTAGTTGGGAATAGCCATGAACTTCTCGTAACATAGCAACTCTAAGATGGTGTGGTAGGATCCCTTGAATCCGATCACTTTGAAGGTCAGGGTCTCTGTGCGTTAGTTGGACCAATCCCTGAACTTGACGAGTTGGATGTCTTTCCGATGGGAATGGCCTGCTACCCTAGCACGACACCATGGAAGGGTGACTTGGTTGGCCAAACTCATGAATAGTCGATGCCCATTATGTCCAAGGTCTCCACATACATGATGTTGATGTCGTTGCCTCCATTCATTAGTACTTTAGAGAGTTGCTTCGTGTCGACGATGGGGTTGACAACTAGTAGGTATCAACCTAGCTACATGATGCTAGTTGGGTGGTCAGACCGATCAAATCTGATGGTCGACTCAGACCATCAGAAGAAGTGTGGCGTAGTGGGCTTGGTCACATAAACCTCGTACCGTGGTCTTATTATTATTGATGACTATTCTCGCTTCACTTAGGTATTCTTTTGTAGGATAAGTATAAAACCCAAGAAACCCTCAAGCATTTCCTAAGATGGGCTCAAAATGAGTTTGAGCTAAAGTGAAGAAGATAAGGAGCGACAATGGATTTGAGTTTAAGAATCTTCAAGTGGAGGAATATCTTGAGGAGCAAGGCATCAAGCATGATTTCTCCGCTCCCTACACTCCATAAAAATGGTGTGGTAGAGAGGAAGAACATGTTGCTCATTGATAAGGCAAGGACGATGCTGGTAGAATATAAGACGTCAGAACGGTTTTGGCCAGAAACCGTAAATACGACTTTCCATGCCATAAATCATCTTTATCTTCATCGCCTCCTCAAGAAGACAACATATGAGCTCCTAACCAGCAATAAACCAAATGTTTCTTATTTTCGTGTATTTGGGAGCAAATGCTACATCTTGGTCAAGAAAGGTAGACATTCAAAGTTTGCTCCCAAAGTTGTTGAAGGGTTTTTACTTGGTTATGATTCTAATACAAAGGCATATAGGGTCTTCAACAAGTCTTCGAGTTTAGTTAAAGTCACTAGTGACATTGTATTTGATGAGACTAATGGCTCTCCAAGAGAGCAAGTTGATCTTGATAACATAGATGAAAACGAGGTTCCAACGACCGCAATGACTATGGTGATAGGCGATGTGCGATCGCAGGAACAACAAGTGCAAGATCAACCTTCTTCCTCAACAATGGTGCAATCCCCAACTCAAGATGAGGAACAAGTACCTCAAGAAGATGGCATGAATCAAGAGGGAGAACAAGGACAAGAAGAAAAGGAGGAGGAAGAAATACCACATGCACCTCCAACCCAAGTCTGCACCAATATTCAAAGGGATCATCTTGTGGATCAAATCCTTGGTGACATTAGCAAGGGAGTTACTATGCATTCACGTATTGCTATTTTTTTAGCACTACTCCTTTGTTTCTTCTATTGAGCCTTTATGGGTAGAAGAAGCTTTGCAGGATCCGGACTGGATGTTGGCCATGCAGGAAGAGCTAAACAACTTCAAAAGAAATGAAATATGGCGTTTAGTGCCACGTCCAAAGCAAAATGTTGTGGGAACCAAGTGGGTGTTCCGCAACAAACAAGACGAGTACGGGGTGGTGACAAGAAATAAGGCGAGACTTGTGGCAAAAGGATATGCCCAAGTCACATGTTTGGATTTTGAGGAGACTTTTGCTCCTGTAGCTAGGGTTGAGTCTATTCGCATACTATTAGCCTATGCTGCTCACCATGCTTTTAAGCTCTCAAAGGTAGATTGAAAGGAAAATGATGAACTTGGACAAAGGAACATGCTTCCACTGCATAATGCATCTTCTTGATCTTAATTCGCAATATTCTGGTGAGACAATGAGGTTTTGAGGCCCCTAGTTTCTCCGTTTTGGTTCTTAATGCCAAAGGGGAGAAATTAAGGCCAAAGCAACTCGATGGACCGCCACTTCTGGATTTCAAAAATTATTGTGTTTTGAACCTATCTTTTTATTTAAACCCTCTTAACTGCAAGAGGAGCCCTCAAATTACAAAACTACTCTCTTGTGGGGGGAAAATCTTTTTATGGGAAAATGGGGAGCTTTTGGTTTTTGATCAAAACTAGTCTTGAAAAATATCTTGATTTACAAAACTAAAGTGTGTTTGACTTAGAAGTAAGAAAATGAATTTGTATTGCGAAAATAATCCAAGTGGTCGCAAAATGATCCAAATATGCAAAATCATATACTTATTCTATCATTATTTGACTTGAATTCAATTTGCAAAAAATGACTCATATTTGGTTATGTTAGTTTCTTTTAAGTTGTTTTTAGTGCGTTGGCATAAATCACCAAAAAGAGGGAGATTGAAAGGGAAATGTGCCCTTGGTCCATTTCTTATTATTTTTGGTGATTAAATGCTCAACACATTACTATGAACTAACTATCTCGGTATGAGCATAAGAATAGGTTGTGATCAAGCAAATTGAAGATGTCAAGTCTAAAAGAACACTTGTTGGGCTTGAGTTTTCATACATTGCAAATCCTATTGAAGCAGCGGAACGAAGGTATGATTCTAGCACTTAGTCAATTGTTTTAGTGGATAACTATATTCATATAAGTGCTAGGGAGCTCTTCAAGTCGAGACAAATTGGAGTAATGGAGTTTGGCTAAAGTCTGACAAAACTTGGGTCAGTCTGGGCCTTACCGGACTGTCCGGTGTGCACCAAACATCGTCCGATGACTAGGCTAGATGGCGACTGAAAAGGTTGTTCTCGGGAAACCGCTATAGCTCCCTAGATAAAAATCATCGGATTATCCAGTGTGCACCGGACAGTGTTTGGTATGCCAGGCCACCAACGACTACTCATTGTGCAATGATCGGCAGCGCAATCGGTGTTGGCCACGTCAGCTCGGCAACGGTTGCCATGCTGCACCGGAATGTCCGGTGTGCCACCAGACTGTCCGGCGTGCCAGGCGGCTGAAGGCGCGCAATGGTCGGCTCGGGTGTAGAAGTAAACAAATCGCTGACTATTCAGTGTCAGGTGTGCACTGGACAATCCGGTGCACCTGCGTACAAAAGGCAATCCACAGTTGCCAAATGAAGAACCAATGGCTCCTAGGCTCCTTAGGGATATAAAAAGGGACCCCTAGGCGCATGGATCATGTACCCCAAGCATATTTTGAGCACACTACAACTTCAAGACTCCGCGACCACGCCCCCGAAGTGTTCTAGAGAGATTTGAGCGCATTTCTTGAGTCGTTACTCTATCGTTTTGTTGTTGTGCTCTCTTCTTCACATTTGTGTGTGTTGTTGCTACGTTGTGCTCTTGTGTGTGTATTCTATCTCCCTTACTCTTGTTTGATTGTGATCAATCATGTAAGGCGTGAGAGACTCCAATTTATGTAGATTCCTCACAACTAGGATATTGATATAAGGAAGATAACTGTGGCACTCAAGTTTGATCTTTGGATCACTTGAGAGGGGTTGAGTGCAACCCTTGACCAAAGGAGGTAACCACAACATGGAGTAGGCATCAGCCAAACCACGGTAAAAATCATTGTGTCTCTTGTCCATTTTATTATTGCGATTAGTGTCTTCTTGAGTTCTCATATTCACTTGTAATTTTGCTCCAAAGTTTAATACTCATCTTAAAGGAGCAATCAAGTGAAGAGTTCTCTTTTCTCCTCTCTTCTCACCCTAACTCAATTTTAGTTATTATTAACACATTTTATAAACCAAGTTTGTGTTGTTTAGAGCTAATCTTGCAGGATCACCTGTTCACACCCCCTCTAGGTGCTCTTAATGGGCCCATCGTGACTGGGGTCCGATCGCAAGAGTTTCGTCGCCCTTCATGATGACCTCGAGGTGGCTTTGAGGTGTTTCGATAATGAAGCGCTCGTGTGAGTGGTGATGGTTCCCCTCACTTGAGTCTATGTCGGATGATCCTAACGACCCTCTATTTGGATGTCATGGACTGACTTCGACACGTAGGAGTCTACCCCCACAAATTCGATGTTCGTGGGTGACTTGTGAACATGCTGCTCCAGAGCCCCATTGAGGAGCTTTAGGGCATTGCACATGTCATGCATGAATGCCACAAGAGTGTTTCCCATGAGAACCTCCAAGCAGAGTGGTACTCCTTTAGAGAGTTGGGCCCACATGTTTGTGATGAGTAGAAGGTATGGCACATGTCTTCTTGGCAAGGTCAGGGTCATAGGAAGGTAGGGAGCTGACACCACATGTGCTTGACATCCAAGTTATCTACTCCTAGATACTTGGGTCTCTGAGGCATGGAGCTCTTGCTCTCTAAACACCTTAGTGATGGAGTCGATGTTGGTGGGGACAAAGAGGCTGAGCGGTGGTCTCCACCCGTGCAAGTGCCCCTCGATGGAGACGATGAAGTCGAGGATACCAAAATGTATGCTCACGCTTGGGACCCAACTAACTACATGGATGGCCATATGTTATCGTGTGATGGGGGAAAAGGTGTTATGACACACAAAAAAACCTATGTAGCATGCTAACTATCGTTGTTTCGAAACCACTAGCTAGTAAATATCATGTTGTGCGTGCCTTAGAACGAATGGTGTGCAAAGAGGACACATGGTTTTATACTGGTTCGGGTGGAATGTCCCTACATATAGTTAGGCTGCTCATGTTGCCTTGCACTAGTTTGTAGTATGGGGTTACAAACAAACAAGAGAAAGATCAAGCTCCCAAGTCTTTGGTGTGCGAGTGTTCGGTAGTTACAAGTGTTATATGCTTTGATTTGTGCTGGCGGTGTGTTCGTGTGATTGCTTGTGTCCTCAACCCTGGTCACTTCCCTTACTTTTATAGGCTAAGGTGGGAGAAAAACCTCATTACAAAACTCTAAGGGTTAGGTGAAGTGGATGGAGGTCAGGCGTTATCGCATAGTTTGTTGTATTTGGCATTCCCGTCGGTCAAGGGACACCATGGATGACTCCTCCTCCCTTCATTAGGATATTGTAGCCATGCCTAGACCACCCCAAAGCCTGTTGTTATGCTCCATCATGTCCCGCAGTGGTTTATTTAGTGTCTTTTGTTAACTTCCTAGCTATAGTGTGGTTGAGCCAGTGTCCGGCTCCACACCATGGTGATCGACGATGCTCATGTCGTCATTACTAGTAACTTTATAAAACTCTAGTGCCTTGAACTTGGGTGGCTGTGGCATATGGTTGAACTCTTAGTGTATGACTTGGCGTAGGCGACCACCTTCCACTTGGGGAGGATGCCAAAGTGATCTTTCATGAAGTATGTTAGCTACTCTTGCGCGTCAGCGAAGATTACTCCTCCGAAAAATATAGGGCATGGCTGTTGGGAGCCAGCCCATCGCCATATCTTGTTTGCCACTTGAGCGACTCTTGTTATCATATTTGCCCTTCTCTAAGGCATGTCTTGCCTACTGAGATGATTGTTCCCCCTCCTGGAGTAGCATATAGTGCAAGGTGCACATGAAGCCTCCGAGATGTATACCGAAGAATGGTCGTAGATGGAGGGAACTTTGTGTGGTACCCGGAGTTGGTAGACCTAGAGTTCTGCCTTGGAGTCTTTAGGGTCACTGATCAGCATCGGTTCCAATGTTTGAGCATAGAATTGTTTCCCCCCTAATGGAACCTGAAGGTGGACCCTGGGGCGGTGTAGTTCCCAGCCAGAATTTGTTTGGACACTCTTGCAATAACAACCTCAAAGAAGTTGATTAGGACTTCTAACTACCACACTATATTGTGATGTATGATGTAGTTCATCTCTTGGTGGAGGGTGGTAGTGCATTCTTCTGATGGTGTAGATAGATGTATCTTCCAACATTGACTCTGGTCGGTCAGCAAGACAAAGATTCCTAGAGCGCATCTAGCTGAACCAGGCGAGAAGCTTGTAAAATAGGTTTTGAGAGCCTAGTCATGGCAATCCTGCATCTCAGGGCCGAAGTCATCAAGTTGAGGTGCTCGTGCTCGTCGTCATTGTTGATGATCTTCTCCTTCCTTGAGAATGTCATGGTGGTGGGGGAGAGTTGATGCAGAGCTGGGGTTGAGTCGATATCAACGAGTATACCTAAATCGATCGATGTGAAAACTAGTGTCGTGGGTCCCATCAGGCATACAGAAATATGTCATCGTGTGAACTGGGTCGAGGATAACACACGAGGAGTCGGGAGGTGCGCTGCTACTGCGCGGTTGTTCCTCTAGAACAAGACTCCATGAACATGTTGTTGGGGACTTGTTCTCAAATGCTATGAATCAAGAACAAGGCAACATAAAATGTTAAATGTTAACGCCCTTCATCCTCCGAAACATTATTTCCCTAAGGTTATAATGATCTTCGGACGGAGGGCATACCTTCATCTATTTTTCATACATAAATTTATGATTATTAACAACGAATGAAGCATGTAAAGCATAAGAAAAAATGTGAACAACAACATTATCACACATATATTTCTTATCATATAAACGCAAATCAACATAAGAACAATATTGAATTACATTTAGTACCTTCAACTTGATAGACAGCAGAGGTACGAACGTGACGCAAAAGCAAATGCCAAGTCAGCGTGAACAGTACGGGAGCATTGTTCATCTATTTATAGGCACGGGACGCAGCCCATGTAAAATTACACCCATGCCCTTTACATTTGCTAATGACTCTATAGTGATCCATCGAGGTCTAAATAGCCCTTTCCCCTTTTAAGTCGGTTCCCTTTTCTGCTGTCATGCCGAAGCTCCCTTGCATGTAGCTTCGGCGCTGCGTCAACCTTCGTATTCTTTGTGCTTCTCACACTGTGGTTCTGATTCAAGTCCGAAGGTACCTGTTCATGTATTATACTCCAGAAACATTGTTAAATCATGTTTTTAAGGACCTTCAGAAGACGAAGGCCCCCAACAGTAGCCCCTCGCAATATTAATTTGTTAGAATAACGAATTCAAATTGCGATATGGACGAAGGCCTTAAGCCGAAGGTCCAAAAAACACCTTCCGTTTGCTAGAATAGCAACAGTCGATGACAGACGGGGCCCTCCAATTTGGAACACACTGAGCGTATAAATAGGAACTCACCCCGAGCACATTTGGTACGCTGCCTGTACCATTTGCTTTATTTTCTCAATCTCATAGCTCTTGTTCACTAATGCTTGCTAGTTTTTCAAGTTTTTTAGCTTCGGGTTGAAGGACACGTTTTCGTCAGTTCTGAAGATAAGTTGTCTCAAGACAAGAAGACAGTTGCTGAGACGAAGCTAACCGAAGAGGAGAAGCTTCTTGAGGAGAAGACTGCTGGATTTGTTGAGTCAATAGCGAAAACGAATACAGAGAAGATTACTAAAGAAATTTTGGAAGGCTTGTCTGAAGATAGTGATGATAGTGACAGCTATGATGTGGAGAGTGGAGGCAAAGACTCTGAAGATCGGCCCTGGCGACCAAGTCATGTAGTCTTTGGGAAATCAACTATCAAGCAGAGTCATCTTGATAATATGAGGGGAAGATATTTTCGAGATTTGTCTATTGTGAGGGCTAACGCAGACAGAGCCGTTCCCTGCTCCCGAAGAAAACGAAGTTGTAATCTACCGAAGCTTCTTCAAAGCTGGACTTCGGTTCCCATTAAGCGGATTTGTGGTTGAAGTTTTAAAGATATATCAGATTTTCCTTCACCAGATCACTCTCGAAGCAATTATCAGAATGGGGATCTTCGTCTGGGCTGTGAGGAGTCAAGGTCTAGAGCCAAGCGCAAGATGTTTTTGCAGTATGCACGAGCTTTCGTATGAGACGAAGCCGTGGGCAAGGAACAATATCATAACAATTTTGGGTGCTACAGCTTTGTTGCTCGCTCTGGCGCAAGCTACCCAGTGCCAACGTTTCGAAAGAGGTGACCCGGGGCCTGGATGGAAGAATGGTTTTACGTGAAAAACGATTTGAAGGCAAGAGAAGATATTAAAGAAATCATCATGCGACCCATATGGTCCCGCTTCGGTCTCCGAAAGCCGAAGGTAGAAATTGATGAGGCAGCCGAAGCATGCCGAAGGGTCTTCAGTACAATTTGTTCTTTTATTAGGACAAGAGACTTAGTTCAAGAACATGTAGCCTACAGGATATGGCCACTGATAGACAGTTGGGAAATGCCAAAAGAGACCATCACTAACCCTAGCGAAGGTGGTTTAGTTCGATTGAAATACACCTTCAGGTTTGGAGACCAGTTTATCAAACCAGATGATGACTGGCTGAAATGTGTTGAAAATACTAGTGATGAACTACTTGGAGCATACTCCAAGTCTGAAGATAATGCACTATCTGCGGCCTTCGGGAGCCGAAAAAAGAAAAGACTAAATAGGGTTTTTGATGCTATTGGATTTGTGTACCCTGACTATCGCTACCCGCCGCGGGGGCAGAAAAGAAAGGGTGCAACCTCTAGGAAGGCTGCTGCTTCGGCTGCTTCAAGCGAGCCCGCACCGAAGAGGAAAAAGTTGAAGGTCCTTACTCACCGACCGCGCTACATTGAACCGGCCATAGTGCCTGAATTTGGCGGTGAGACTTCTTCAGCTATTGAAGCCAAAGGACCCGCTCCTACGCAGAGGATTGAAGAGTCGGCTGCAATGCCGAAGACTGACAAAATTGAAGAACCGAGAATCGAAGGGACGAAAACATTAGAAGTTCTAAGCCCTTCGGCAGGAGTGGAGGTGCCGAAGACACAAAAAGGTCTAGCAGCGACCCCCAAGAGAAAAAGGATGGCTAGTGTACTAGATGTGCTGGAGACGATAAAAGCTTCAAGCTCTACTCCAAGGAAATTTGCCAAGGCTTCGAAAACACAGATTGAAACCGAGACAAAGCTGACCAAAACCGAAGCTACAATGAGTCAGGCTGACGTCGAAGCTGGGCCTTCAGAGCCCGCCAAGGAGAAATCCTCGGAAACTGGAGAAAAGGCAGCAGAAGAAGAAGCTATAGAACAGATTTTGCCTGAAAAAGCTGCCGCTCCTACTCCCGAAGAGCCTTCCGAAGTCCTTGATTATATTATTCGACACACTTCGGGAAAAAGATTATCTGAAGAAGAAATTTTTGAAGCTAAACACTATGCCCGAGAACTGAAGTACCCGAAAGGGGCCTTAGTGTTTAATGGCACAGATGAAGATGACTTCTTGTATTGCCTCCAAGACAACAAAGAATTATCTGTCTGCCGGGAGATGGCCAGAAGTATGGGGTTACCGAAGCTTGAAGCTGGCCTCTGCGCCATGACGAAGGACGATCTTGCGGATAGCCTTGCATATAACAGTCTGAAGGTACAAAAATTGTGTATTTGGAAGTTTATGAATTTTGAATTATTCTTTTGTTTTTATATTAACCCATTCATTCTTTTCATATAGGGTTTAATACTTAGCAACGCCTTAAGGGCGCAAAAGAATGACGAAGACGAGAGTTGCACTATTGCTCTCAACAACCTTCGAACAGAGGTTATTAAGCCGAGGAACGAAGCTTTGGAAAAAGACAAAATTCTACTTACATTGGTGGACAAAGTAAAGGGGGATGAAGCTAACTTCAAGGCTCAATCTGAAATCCAAAGGAATGAGATTGAAAACCTTCAAAAACAACTGGCCGAAGCCAAATTGAAATGCGCTATTGCCGAAGCTGACCGAGATGCTAGTGAGTACTGGAAAAAATATTTTGAAAAAACTGTTGCAGAGCTTCGCTCATCAAAAGAAAGATGTTTTGAAAATCTGTAGAATGCGTCAAAAAGAGAAAAACTAGCTTCGCCAACGTGGGCGCGTACTCGAGCGAAGACAACTTCATAAGAGGTGATCCTGAGGGCGTAATTGAGTGGACCAGCAGCGAAGCCAAAGCTTTTGAAGAAATTTTGAGCGACCGCGGGGACGTCTGCGCGTTCTCTGGTGCGAGGGGAGTTGCAGCTATTTTAGAGAAAGCAGGGTGCCAACATGTTAAAACTTTGGCCTAGGCCGAAGCTGCTTTCTCTATTGACGATACGAAGGACCCCTCGGCCGAAGCAAGCTTAATAGGCGGAAAATTTTTCACTGATATCTAGGAAAATGGCGGCCGAGGGATGACCCATGAAATAATGAAAACGAGCGAAAAAGACATTCATGATGCTCGAGAAGCAACAAAAGCAGCTGAAAAAGCTGCGGAACTTGAAAGACAGATAGGTATTACTTAATGGCTTTTAACTTTGTTGTTTATTTTTGTGATTTTGAACTAATTTATATCTTCTACTGTAGCTGAACTATCTCCTCCCCCAGAGCCATTCGACCCACTGGCCGACCCAGAGACAAAGAAGGCAATAGAAATTATTAATATGGCCGAAGCTATTGTAGACCAAGTTGTCACCAAATTACTAATCGAAGCTGCAGAAAAAGTCCTGAAGGAAGAAGAATAACTACTTGTAAAAACATTGCAAGAATATTAATGTAACATTTGCTGGACTATGCTTGTAATATTCGGTGCTCATAGGTTTTGAATGTAATATATGAATGGTTTTGTAATTCATTTCTTTGTGATGCATGAAACTTTTATGTACATACCGTTTTTGAGCCTTTGGCAAAAAAACACCTTCCCTTCTTTTCATGCTTTGTAAAGAAGAGCTTTTATGCTTCATAAAAAATCCTCCAAGCGTCGCAAAAACATTAATGCTTCGTCAACAATAGATTTTTTCCTCCACATCGGAGCTGATGAAGTTGTATTTCTTCAAAACTTATTTTGTGCCTTAGCACAATTTCACTTTTTCGAAGCATTCTCTGGAGGTCAACATTGTATCCCCTTCTTGTACCATTGATGCAATATGATGTATGATGTTATGTTATGCGAAATAATGTGACGATGTTATGTTATGCAAAATGATATTTATGCCGAAGACACACACTCACACCCCCATAGTGGAATACACAATCTCTTTGCCGCTTATTTTTCGGCTTCACCGCTTATTTTTCGGTGTATCAGCGCTGACTTTTCACTGTAAGTTCTGCATTCCCTTAGGAACGTCTTAAGAACTTCTTCGCCTTCTATTTTGGCGGTATTCGCGTTGACTTTTTGCGCTTCGCCTTATATTTCGGCGGTATTTGGCTCTGCATTCCCTTTGGAACGACTTTTGAGCAGAAAACTTACACTGCGCTCCCTTAGGAACGACTTTTTGTATCTTCGGCGAACTTACGTTGCGTTCCTTAGAACGACTTTTTGTAGCCTCGGTGATACTTGTAATGTGATTTTTAGCCCCGCGTTCCCTTAGGAACGACTTTTGTGCTTTAGCAACTTTTTGGACTTCGTGAGTCTGTGGAGAAGATATATTTCACTATGGCAAGAACGAAGCTATTACAACAAATTGAAAATGACAAGAGAACTAGGTTTTCAATAATTGTTCCTTATTAAAAAATAAAATGACAATGAATGTGTCGGCGTTTCGAACCCGGGGGGTCCCTGGACCGACGAGTAAATTGTCGCCGCGTGCCCCAGCCCAGATGGGTCGGCGCGAGACGGAGCGCGAAGGGGGGAAGAAGCCGGAGGGAGACAGGCGTGAGAGGTGAAATCCCGCGGCCTTCGTGTTTGTCCCGCGCCCAGGTCGGGTGCGCTTGCAGTAGGGGGTTACAAGCGTCCACGCGGGAGGGAGCGAGCGGCCTTACTCGAGCGCCGTCCCGTCCTTCCCCGCGCGGCCAACCCTCTGTAAGAGGGCCCTGGACCTTCCTTTTATAGGCGCAAGGAAAGGATCCAGGTGTACAATGGGGGGTGTAGCAGCCGTAAATCACGGGGAGTATCTTCATATACTCTATTACCCCCCAGGTGGAAACAACCGTAACAATGAGATCGAGAGAGAGGTGCCGGTAGCCCTTTGGTGAAGATATCAGCAAGTTGAGCATTAGAGCAAACAAAGGTCACTTTGAGTCGAAATTCGCTCTTAGCTTTGTTCTTTTTGTGTAGCTCTGAGCTGGGTGACTGTGGTGTCGACGAATCAGACATCTCCAACCTTCACCCTTGAATGCATAACCCGGTTTTCTCTACTTCCCAAGAGTGGAATTTTAGTTTCAGGCTTCTTTCAATAGAGTAAAGTCCCTGGATAGGTAAAGTATGTTTGTTCTGCGGTTGCACACTGTCTAGCGGAGGAGAGCTAGCGCTCTAAGTACATGCCATCGTGGCAGCCGGAGAGGTTTTGGCACCCGGTTCGTGTGGTGTCGTGGTCGTCGGAGGAGCGCTGGAGCCTGGCGGAAGGACAGCTGTCGGGGCTATCGAGTCCTTGCTGACGTCCTCTTGCTTCCGTAAGGGGGCTGAGAGCCGCCGTCGTCATAGAGCGTGCGGGGCGCCATCATTACTTGTTTAGCGGAGCGAGCCAGATGGGACGCCAGTCTTGTTCCCCGTAGCCTGAGTCAGCTTGGGGTAGGGTAATGATGGCGACTCCCATGACGTGGTCGGTCTGAGCCCTGGGTTGGGCGAGGTGGAGGCTCCTCCGAGGTCGAAGTCGAGTCTGTCTTCCAAGGCCGAGGTCGAGTCCGAGCCCCTGGGTCGGGCGAGGCGGAGACCGTCGGCTGAGTCCAGGGCTGAGTCCGAGCCCTGGGGTCGGGCGAAGCGGAGTTCGTAGTCTTCCGGGGCTGAGCCCGAGTCCGAGCCCTGGGGTCGGGCGAAGCGGAGTTCGCCGTCTTCCGGGGTTGAGCCCGAGTCCGAGCCCTAGGGTCGGGCGAAGCGGAGTTCGTCGTCTTCCGGGGCTGAGCCCGAGTCTGAGCCCTGGGTTCGGGCGAAGCAGAGTTCGTCGTCTTCTAGGGCTGAGCCCGAGTCCGAGCCCTGGGGTCGAGCGAAGCGGAGTTCGTCGTCTTCCGGGGCTGAGCCCGAGTCCGAGCCCTGGGGTCGGGCGAAGCGGAGTTCGTCGTCTTCCGGGGCTGAGCCCGAGTCCGAGCCCTGGGGTCGAGCAAAGCGGAGTTCGTCGTCTTCCGGGGCTGAGCCCGAGTCCGAGCCCTGGGGTCGGGCCAAGCGGAGTTTCCTATGGCACCTGGGGCCGGACTTGGCTGCTGTCAGCCTCGCTCTGTCGAGTGGCACAGCCGTCAGAGCGGTGCAGGCGGCGCTGTCCTCTTGTCAGGCCGGTCAGTGGAGCAACGAAGTGACTACAGTCACTTCAGCTCTGTCAACTAGAGGGCGCGCGTCAGGATAAATGTGTCAGGCCACCTTTGCATTAAATGCCCCTGCGATTTGGTCGGTTGGCGTGGCGATTTGGCCAAGGTTGCTTCTTGGTGAAGACTGGGCCTCGGGCGAGCCGAAGGTGTGTCCGTTGCTAGAGGGGGTCCTCGGGCGAGACGTAAACCCTCCGGGGTCGGCTGCCCTTGCCCGAGGCTGGGCTCGGGCGAGGCGCGATCGCGTCCCTTGAATGGACCGATCCTTGACTTAATCGCACCCATCAGGCCTTTGCAGCTTTGTGCTGATGGGGGTTACCAGCTGAGATTTAGGAGTCTTGAGGGTACCCCTAATTATGGTCCCCGACAGTAGCCCCCGAGCCTCGAAGGGATTGTTAATACTCGCTTGGAGGCTTTTGTCGCACTTTTTTGCAAGGGGACCAGCCTTTCTCGGTTGCGTCTTGTTCCGGTGGGTGCGCGCGAGCGCACCCGCCGGGTGTAGCCCCCGAGGCCTCGGAGGAGTGGTTTGACTCCTTCGAGGTCTTAATGCATTTCGCAATGTTTCGGCCGGTCTGGTCGTTCCCTCATGCGAGCTGGCCGTAGCCCGGGTGCACGGTCGGGTCCCAAGTTCTCGGGCTGGTATGTTGACACCGTCAACGGTTTGGCCGGAGCCGGGTTTGTGAGAGCAGCTCCCGAGCCTCCGCACAGGGCGAGAGGGCGGTCAAGGACAGACTCGACTTTTTTACATACGCCCCTGCGTCGCCTTTCTGCAAGGAGGAGGGGGTGGAAAGCGCCATGTTGCCCTTGGAGGGCGCCGAACATGGTGTCTCCAGCGAGCTGCTGACGGGTAATCCAAGTGGACGCTCGTGCCCCATTTGTTAGGGGTCGGCTAGAGGCCCGGAGGCGCGCTCCAAAAGTACCTGCGGGTGATCTGCCGGACCCGGTCCCCTTTTGACGGGGTCCGAGGGCTCGATGCCTCCCTCCGATGGGATTCCGTTACAAGATCGTTCCCGCTGGTCTCGGAAATGTCCTAGGGTACCTCGGGAGTGTAGTGGGCGCGGAGCCCAAGCGCTCTGAGGCGGCTGTTGAACCCCTCCGAGGGGCCAGCCTTTTAACCTCTGATCAGTAGGGGGCTCGGGGCCCGTTTCCTTCGCGGAGAAGGATCCCTTTCGGGGTATCCCCCTTTCCCGGTCCCTGTTGTAAGAGAGAGAAAGAGGAAAAGGAAAATGATACGAAATCGAATGACGTGGCGTACCTCTTTTGATGCGGTCATTATGGCGAAGGCGAAGCGTCGCCCGCTTCTCCTGCCAAAGATGTTGCATGTCCCACCGCGGAGTTAATGCGACGGGACGAGTGGTTCGCGGGGCGGCCGTTGCGCACGCGAGCCGTTCGAGGAACGGAACACGGGGGCGCCGTCTTCACGCTGTGGGAGAGGGTTCCCTTGCTGTCCCTGGATGGGACGTAAGCTTGGCTGACGACGTGACCGCTGCTTCCGCCCGCCTGCCACCGCCATTACTGCCGGCCCATTTTTGGCCGTATTGACCGGCGCGCCTGGCTGGCACTGTTGGGTCATACGCAGGGTTGCCTCGAGTCGCGGTACTGGTTCTGTAGTCGAGGAGGCGCGGTAGTGGCACGAGTGGCGGTGCAGTTGCTCGCATGTAGCAACCGGCGCGCCGGTTGCATGACGTGTGGGCCTGGGCCTCCATGCTGGGTGCGTTGAAAGTCGGAGGGGTGCGCCCACTTAGCGCGGTTGCATGCCGCCTGCATGGCTGTCCGCCCTTTCACCCGCTGGTCTGGGCGATAGTGGAGGAATGCTTCTAACCGCTGGGCAGTTGCATGCACCACGCGCGGCGGTTTGGCTTCTTCTGCCCTGGGCCAGCTTGCATGACGCGTGGGACCCAGCCCCCGTGCCGTAGGGGGAGGACCTTGGAGCGTGTTGGAGAAGGCTCAGCCCACGGTGGCTAAGGACGCGAGTGGGGAGAGTCGCCTTTAAAAGGAGGGTGATCCCCTTGAAAGGCGACCATGTCTTTGCGCTCCCTTATGCATCGCGTCTTTCCACCTTCCGAGCCCCAGGATGGGGAACACCCGCAATCCTCTCGCCTTGTCGTCGGAGGAATGCAACTTCGTGGAATTTGGTACCTTTCAGCCATCGTTCAGCTTCAAGGATTTTCATCATGCAGCCCGGCCGCATCCCCTCGCCGGCGGTCACCCAAGACGGTGACCACCAGCCCCTGGGTGGGGAGAAGCAAGTCGGGCTACGATCTTGGTCCCGCCCTCAGCTTCAAGGATGTTCATCATCCTGGCTGGGGCGGGGACCAGGCTGAGCCGGAGCTCTACCTCCCGCGCGGGTTCGTGGGTCAGCCTCTCCTTCAGCATTCAAGGGAGAGGGCGCTCACTAGCCCTGCGAGAGGGGCGGACTTCGACAACGCGGGGCTGGTCGACGGCAGGCGTCGTCAGCTTCAGCGCGTTGGGCTCGCCGGCTTGGATCCCAGTGCCCCCTCCCGCCGCAAGGGCGGTTGTCGCGCCGCGCGCACGGGAGGACCGCCCAAGACGTCGCGCGCTGCTAGGGCGGCGTTCGTGTTCTGGGGCTGTCCTGCCTTTGCTCCGGTACGGCGCCTCCGCGCGGAGGTTGGTGCTCCGCTCGTCCGGGAGGATCCGAGTGGGGATCTGCCGGTGGGCTGACGGCTCCTGTCGTCGGTGCCGAGGTGGAGGCGGCTCGAGAAGTCCCCGTCGCCGACGGGATCACCGCCACCATCCATGCTCCGGGCCTCCGGCTCTTTGTTCTTGTCCTTGCCCCTCGAGCGTCGGCGTGGGCGAGGGCAAGGTTGCAGCGGCATCCGCCCTGAGGCCATCGCTGCTGCAGTTTGGCCACCCGGAGCGGGGGTCGTTGTCGCTGCTGCTGGAGCGGGCGACGGCGAGCCATCCGTCGGCCTTCTGTTGCTCCGCAGGCCCCCCAATCGTGTGGGGTTGTTCGTACCTGCGGAGGTGGAACCGGAGTTCCGTTTGTAATGGCACCTTGAATGCCGGTGTTTTGTTCATTACGGCTGTCGGGGCCTGAACATGTATGTATTTTCGGCGCGGAGCCGTGTTTTTTCCTCATTTCGAGCACTAAGACTCGCCTGTCGGCTATCTGAACCGCTTCACCAAACGTGAGTTGCCTCGTGCAAAGGTGACGAGTGAGGTATCCGTATTCCGTAGGCGTAGGAGTCCCTCGGCTCGGTCGGCCTTGCTGTTCGAGGCTTCTCTTGCTTAGTTAAAGGAAACCCTCGGCCACTCTTCGATGAGCCGAAGCCGGAGGTAGCGGTGTGAGCACGGACAGAGGCTGAGTTGGCTCGAAAAGAAGACTTAGACGGCCAGAGCCTAGCCGGGTCGTCCACTGGCGGGATCGACGCCGGAGTTGGGTTGCCGAGGCCACAAGCTGGGCCGATGCCCTCGGGGGACAGCTGGCTGAGGCCTCGGGGCGACCGGTCGAGCCGTCTGCTCGAGCCGGATTCCTGGAGAAGACCCTGGCGGCGATGGCCCGGGCGTGGTGCTGATGTCGTCCTTCGGAGTGGGGATCCTCCAACCGCGTCGCCGTCCGAGGCTAGGTCGGACCCCGCCGAAGGTGTAGATGACGCCGAGGGTGCTGCTGCTCCTTTTAACTGTCAAGGCACGAGCCTGCAGGATCGGGGTATCTTGTAGTGTGTGTATGTTTTCTGCGGCCGCCGAGGCCCAAACACACCATCGTCGTGTTGTAAAGCTGTGTTTCTTTTCCTCTTGTTTCGAGTATCTGGACTTATTTGTCGGTAACAGAATTGTTTGTCCAAGCGAGAGTTACTTTTCACGGAAGGCGATGAGTGAGGTATCCGTATCTCGGAGGCGTAGGAATCCCTCGGCTCGGTCGGCCTTGCCGCTTACGTGCGCTCTTACTCGTCCATAGGGTTCTGTCACCGACGCAGTCGAGAAGGCTCGAAAAATCGTTTTGGCAGAGATGTTCCCGAGCGTGAAGACTTGTTCGGTCCGCGGAGTCACTTATCCAAGCGTGAGTTACTTATCGCAGAAGGTGATGAGTGAGGTATCCGTATCCCGGAGGCGTAGGAGTCCCTCGGCTCGGTCAGCCTTGGCTGCTTACGTGTACTCCGTCGTTTTCAGGATCCACTTTCGAAGTAGTCGAAAAGCACGAAAGACATTCTGGTAGAAACGATCTTTTTCCGAAGAAAATTTTGACGCAGAGGGGGTTCCCCCCTTTTAGCCCCCGAGGGAGGGTCGGGCTTTGCCGAGGCAAGGCTGACCCTTCCTTGATGACTAAACTTTGCGTGTGAACGAGGTATACGAACAACTTGAAAGCATCTTAAGGGTAGAAGCGACGTAGTTGTCGGATGTTACAAGCGTTGTTGTAGACCTCGCCTTGACTGTTGGCCAGCTTGTACGTCCCGGGCTTCAGAACTTTAGCGATGACAAACGGCCCTTCCCAGGGAGGCGTGAGCTTGTGCCGCCCTCGGGCGTATTGTCGCAGCCAAAGCACCAGGTCGCCCACCTAGAGGTCTCGGGACCGAACCCCTCGGGCGTGGTAGCGTCGCAGGGACTGCTGGTACCGCGCCGAGTGTAGTAAGGCCATGTCCCGAGCCTCTTCCAGCTGGTCTAGTGAGTCTTCTCGACTAGCTTGATTGCTTTGGTCAGCGTAGGCCCTCGTCCTCGGGGAACCGTATTCTAAGTCTGTGGGCAAGATGGCCTCGGCCCCATAGACTAGAAAGAACGGTGTGAAGCCCGTGGCTCGGCTCGGCGTTGTCCTCAGACTCCAGACCACCGAGGGGAGTTCCTTCATCCATCGCTTGCTGAACTTGTTGAGGTCGTTGTAGATCCGAGGCTTGAGTCCTTGCAGAATCATGTCGTTGGCACGTTCTACCTGCCCATTCGTCATGGGGTGAGCCACGGCGGCCCAGTCCACCCAGATGTGGTGATCCTCGCAGAAGTCCAGGAACTTTCTGCCGGTGAACTGGGTGCCGTTGTCGGTGATGATGGAGTTCGGGACCCCAAAGTGATGGATGATGTTGGTGAAGAATGCCACCGCCTGTTCGGACTTGATGCTGTTTAGGGGTCGGACCTCGATCCACTTGGAGAATTTGTCGATGGCGACCAACAGGTGCGTCTAGCCCCCGGGTGCCTTCTGCAAGGGGCCGACTAGGTCGAGACCCCACACAGCAAACGGCTAGGTGATCGGTATGGTCTGCAGGGCCTGAGCGGGCAGGTGGGTCTGCCTTGCGTAGAACTGACACCCTTCGCAGGTGCGGGCAATTCTAGTGGCGTCGGCCACCACCGTCGGCCAGTAGAAACCTTGTCGGAAGGCGTTTCCAACAAGGGCTCGAGGTGCTGCGTGATGGCCGCAAGCCCCCGAGTGTATCTCTTGTAGGAGCTCCTGGCCTTCGGCGATGGAAATGCATCGCTGGAGGATGCCTGAGGGGCTGCGATGGTAGAGCTCCTTCCCGTCTCCCAGCAAGACGAACGACTTGGCGCGCCACGCCAACCGTCGAGCTTCGGCTCGGTCAAGGGGTAGCTCTCCTCGGTGGAGATATTGCAGGTACGGGGTCTGCTAGTTTCGATTAGGCGTGACCCCGCTCCGCTCCTCCTCGATGTGCAGTGCCTCACCCTTGGGGGCCGAGGGTACCTCGGGCCGAGTCGAGGGTGCCTCGGGCCGAGCCGAGGGTGCCTCAGACTGAGCCGAGGGTGCCTCGGACTGAGCCGAGGGCTTCACGGGCTCGGGCGTGTCATCGGTCTTGACGGAGGGTCGATGCAGGTCTCGGGAGAAGACGTCTGGGGGAACCGTTGTTTGCCCCGAGGCTATTTTATCCAGCTCGTCTGCAGTCTCGTTGTAGCGCCGGGCGACGTGGTTGAGCTCGAGCCCGTAGAACTTGTCTTCCAGGCGCCAAACCTCATCGCAGTAGGCTTCCATCTTTGGGTCGCGGCAGTGGGAGTTCTTCATGACTTGGTCGATGACGAGCTGCGAGTCACCACGAGCGCCGAGGCGTCGGACCCCTAGCTCGATGGCGATGCGCAACCCGTTGACCAGAGCCTCGTACTCAGCCACATTGTTGGACGCCGGGAAGTGGAGGCGTAGCACGTAGCGTAGGTGCTTCCCGAGGGGCGAGATGAAGAGCAGGCCTGCGCCTGCTCCTGTCTTCATCAGCGACCCGTCGAAGAACATGGTCCAGAGTTCCGGTTGGATCGGAGCTGTTGGGAGCTGGGTGTCGACCCATTCAGCCACAAAGTCCGCCAAGACCTGGGACTTGATGGCCTTCCGAGGGGCGAACGAGATCGTTTCGCCCATGATTTCCACCGCCCACTTTGCAATTCTACCCGAGGCCTCTCGGCACTGGATGATCTCCCCCAGGGGGAAGGATGACACCACAGTTACCGGATGAGACTCGAAGTAGTGTCGCAACTTCCGCCGCGTCAGGATCACCGTGTACAGTAGCTTCTGAATTTATGGGTAGCGGATCTTGGTCTCGGACAGTACCTTGCTGATGAAGTAGACTGGCTCCTAGACGGGCAATGCATGCCCCTCTTCTCGTCTCTCAACTACGATCGCGGCGCTAACCACCTGAGTGGTCGCGGCGACGTAGATTAAGAGGGCTTCTCCGGCAGCGGGGGGCACCAAGATGGGCGTGTTCGTGAGGAGCGCCTTCAGGTTCCCGAGGGCTTCTTCGGCCTCAGAGGTCCAAGTGAAGCACTCGGCCTTCCTTAAGAGGCGGTACATAGGCAGGCCTCTTTCGCCGAGGCGTGAGATGAAACGGCTCAGAGCCGCAAGGCATCCCGTGACCCTCTGTACGCCTTTCAAGTCCTTGATGGGCCCCATGCTGGTGATGGCTGCGATCTTCTCCGGGTTGGCCTCGATGCCCCGCTCAGAGACAATGAACCCCAAGAGCATGCCTCGGGGAACCCCGAAGACACACTTCTCGGGATTGAGCTTCACGTCTTTCGCCTTGAGACATCGGAATGTCGCTTCAAGGTCGGAAAGGAGGTCAGAGGCTTTCCTCGTCTTGACTACGATGTCATCGATGTAGGCCTCGACCGTTCGGCCAATGTGTTCGCCGAACACGTGGTTCATGCACCGTTGGTACGTTGCACCCGCATTCCTCAAACCAAACGACATGGTAACATAGCAGTACATGCCGAAGGGTGTGATGAAAGAAGTCGTGAGCTGGTCGGACTCTTTCATCCTGATCTGGTGATACCCCGAGTAGGCATCGAGGAAAGACAGGGTTTCGCACCCAGCAGTGGAATCCACGATTTGATCGATGCGAGGCAGAGGGTAGGGAACTTTCGGACATGCTTTGTTTAGACCAATGTAGTCTACACACATCCGCCATTTCCCTCCTTTCTTTCTCACAAGCACAGGGTTGGCAAGCCATTCGGGATGGAATACCTCTTTGATGAACCCCGCCGCCATTAGCTTGTGGATCTCCTCGCCTATGGCTCTGCGCTTTTCTTCGTCGAATCGGCGCAGAGGTTGCTTCACGGGTCGGGCTCCAGCTCGGATATCCAGCGAGTGCTCGGCGACATCCCTCGGTATGCCGGGCATGTCCGAGGGACTCCACGCGAAAACGTCGGCGTTTGCGCGGAGAAAGTCGACGAGCACTGCTTCCTATTTGGGATCGAGCTCGGAGCCGATCCGGATCTGCTTGGAGGCGTCGTTGCTGGGGTCGAGAGGGACGGATTTAACCGTCTCCGCTGGCTCGAAGTTGCCGGCATGGCGCTTCACGTCTGGCGCCTCTTAGAGAGGCTCTCCAGGTCGGCGATGAGGGCCTCGGATTCGGCGAGGGCTTCGGCGTACTCCACGCACTCCACGTCGCATTCGTACGCGTGTCGGTACGTGGGGCCGACGGTGATTACCCCGTTGGGGCCCGACATCTTGAGCTTGAGGTAGGTGTAGTTGGGGACGGCCATGAACTTGGTGTAGCATGGTCTCCCTAGCACTGCGTGGTAGGTTCCTCGAAACCCGACCACCTCGAACATGAGGGTCTCCCTTCGGAAGTTGGAGGGCGTCCCAAAGCAGACGGGTAGATCGAGTTGTCCGAGGGGCTGGACGCGTTTCCCGGGGATGATCCCGTGGAAAGGCGCAGCGCCTGCCCGGACCGAGGACAGATCAATCCGCAGGAGCCCGAGGGTCTCGGCGTAGATGATGTTGAGGCTGCTGCCTCCGTCCATGAGGACCTTGGTGAGCCTGACATTGCCGATGACGGGGTCGACGACGAGTGGGTATTTCCCCGGGCTCGGCACGCGGTCGGGGTGGTCGTTTTGGCCGAAGGTGATGGGCTTGTCGGACCAGTCTAGGTAGACTGGCGCCGCCACCTTTACCGAGCAAACCTCTCGACGTTCTTGCTTGCGGTGCTGAGCCGAGGCGTTCGCCACTTGCCCACCGTAGATCATGAAGCAGTCACGGACCTTGGGGAACCCTCCTGCCTGGTGATCTTCCTTCTTATCGTCGTCGCGAGCTCTGCCACCCTCCGCGGGTGGCCCGGCCTTGTGAAAGTGGCGCCGAAGCATGGCGCACTCCTCAAGGGTGTGCTTGACGGGCCCCTGATGATAGGGGCACGGCTCCTTGAGCATCTTGTCGAAGAGGTTGGCACCTCCGGGAGGTTTCCGAGGGTTCTTGTACTCGGCGGCGGCGACAAGGTCCGCGTCGGCGGCGTCGCGTTTTGCTTGCGACTTCTTCTTGCCTTTCTTCTTGGTGCCGCGCTGAGTTGACGCCTCGGGGACATCTTCCGGTGGGCGACCCTGGGGCTGCTTGTCCTTCCGAAAGATGGCCTCAACCGCCTCCTGGCCAGAGGCGAACTTGGTGGCGATGTCCATCAGCTCGCTCGCCCTGGTGGGGGTCTTGCAACCCAGCTTGCTCACCAGGTCGCGGCAGGTGGTGCCGGCGAGGAACGCGCCGATGACATCCGAATCGGTGATGTTGGGTAGCTCAGTGCGCTGCTTCGAGAATCGTCGGATGTAGTCCCGGAGAGACTCTCCCGGCTGCTGTCGGCAGCTTCGGAGATCCCAGGAGTTTCCAAGGCGCACGTACGTGCCCTGGAATTTGCCGGCGAAGGCTTGGACCAGGTCGTCCGACTTGGAGATCTGCCCCGGAGGCAGGTGCTCCAGCCAGGCGCGAGCGGTGTCGGAAAGGAACAGGGGGAGGTTGCGGATGATGAGGTTGTCATTGTCCGTTCCACCTAGTTGGCAGGCCAGCCGGTAGTCCGCGAGCCACAGTTCCGGTCTCGTCTCCCCCGAGTACTTTGTGATAGTAGTCGGGGTACGGAACCGGGTCGGGAACGGCACCCGTCGTATGGCGCGGCTGAAAGCCTGCGGACCGGGTGGCTCGGGCGAGGGACTCCGATCCTCCCCGCTGTCGTAGCATCCCCCACGCCTAGGGTGGTAGCCTCGGCGCACCCTCTCGTCGAGGTGGGCCCAACGGTTGCGGTGATGGTGCTCGTCGCCGAGGCGACCCGGGGCCGCAGGCGCTGTGTTGCGCGTGCGCCCGGTGTGGACCGAGGCTTCCCGCATGAATCGGGAAGTCACGGCGCGATGTTCCGAGGGGTACCCCTGCCTTCGGGAGGCGGAGCTTTCGGCCCGTCGGACCGTGGCATCCTGCAGGAGATTCTTGAGCTCTCCCCGAATTCGCCGCCCCTCGGTGGTTGATGGCTCCGGCATTGCGCGGAGAAGTATTGCCGCTGCAGCCAGGTTCTGGCCGACCCCGCTGGAAACCGGTGGCGGCCTTACCCTGACATCATCGGCGACGCGGTGCTGGATGCCCTGGGGTAGATGACGCACTTCTCCGGCCAGAGGTTGGACCGCCATTCCTGCCCATTGTCCCGGCGGAATGGCTCAAGCGTTCCTGCTCCCTCGTCGAGCCTGGCCTGCATCTCGCGGATTTGCTCGAGCTGTGGGTCATGACCCTCCGCTGGAACGGGGACCACAGCTAGCTCCCGAAGGATGTCAACGCGAGGCACAGGCCTAGGGAGATCACCATTCTCCGGCATACCAAGATGGTTGCCTTCGTCGGGACCCCCTAGATCGACGTGGAAACATTCACGACTTGGGCCGCAGTCCTCGTCGTCGAGGCTGCGGCTACCGTCGGAACAGTCGGAAAGGCAGTAGTCGCACACAGTCATAAAGTCCCGCATGGCACTGGGGTTACCAAGTCCGGAGAAATCCCAACTAAAGTCGGGCTCGTCATCTTCCTCGGACCCCGAGGGCCCGTAGGTCGAGACGGCCGTCAGCCGGTCCCAGGGTGACCGCATACGATACCCCAGAGGGTTTGGACTCGCCTCTATGAGAGCGTCCACCAAAGCGAAGTCGCTTGGTGGGTCGAGGTTGAATCCAAAAGGCGTGAGATGGGAATCGGTCGGTACCTCTTGGTCGACGGGCGGTGACGAAGTCACGTCCGAAGCAGACTGCACCGTCGTCTCAGGTACGAGGGTGACACCCAGCAAGTCCTTCGCAAGCGTGCTGGCGTCGTCCGTTTGCTTGGGGTTGGCGTGTTGCGGGGAGACGGCGCTCGTCTTCGTCTCAGACGCGAGGTCGATGCCCGACGTGCCCCCCGTTGGGGCGCCGGCGCCGTTGACTCGCTCGACAGCCGACGAGGTGCCACCTCCTGCTTGGCCTCGGTTGCCCCGCCTCCTCCTCCGTCGACGGGGGAGGGGACGGGACAAGCCCGAATATTGTTCCTCCACCTCGCGGGGAAGACGTCGTCGATTCCACCGCCGGCGGGCGGGTTGTCGGCCACCATTGTCGCTGTCGCGCGGCGGGGGAAGGAGTATCATGTCGTAGCTGCCATCGAGGGACATGAACTCAAGACTCCCGAAACGGAGTACCGTCCCGGGCTGGAAAGGTTGCTGGAGACTGCACATCTGGAGCTTGACACGCAGCAGGCCCCTACCTGGCACGCCAACTGTCGTCGTTTCGAACCCGGGGGGTCCCTGAACCGACGAGTAAATTGTCGCCGCGTGCCCCAGCCCAGATGGGTCGGCGCGAGACGGAGCGCGAAGGGGGGAAGAAGCCGGAGGGAGACAGGCGTGAGAGGTGAAATCCCGCGGCCTTCGTGTTTATCCCGCGCCCAGGTCGGGTGCGCTTGTAGTAGGGGGTTACAAGCGTCCAAGCAGGAGGGAGCGAGCGGCCTTACACGAGCGTCGTCCCGTCCTTCCCCGCGCGGCCAACCCTCTGTAAGAGGGCCCTGGACCTTCCTTTTATAGGCGCAAGGAAAGGATCCAGGTGTACAATGGGGGGTGTAGCAGTGTGCTAACGTGTCTAGCGGAGGAGAGCTAGCGCCCTAAGTACATGCCATCGTGGCAGCCGGAGAGGTTTTGGCACCCGGTTCGTGTGGTGTCGTGGCCGTCGGAGGAGCGCTAGAGCCTGGCGGAAGGACAGCTGTCGGGGTTGTCGAGTCCTTGCTGACATCCTCTTGCTTCCGTAAGGGGGCTGAGAGCCGCCGTCGTCATAGAGCGTGCGGGGCGCCATCATTACTTGTTTAGCGGAGCGAGCCAGATGGGACGCCAGTCTTGTTCCCTGTAGCCTGAGTCAGCTTGGGGTAGGGTAATGATGGCGACTCCCATGACGTGGTCGGTCTGAGCCCTGGGTTGGGCGAGGTGGAGGCTCCTCCGAGGTCGAAGTCGAGTCTGTCTTCCAAGGCCGAGGTCGAGTCCGAGCCATTGGGTCGGGCGAGGCGGAGACCGTCGGCTGAGGCCAGGGCTGAGTCCGAGCCCTGGGGTTGGGCGAAGCGGAGTTCGTCGTCTTCCAGGGCTGAGCCCGAGTTCGAGCCCTGGGGTAGGGCGAAGCGGAGTTCGTCGTCTTCCGGGGCTGAGCCTGAGTCCGAGCCCTGGGGTCGGGCGAAGCGGAGTTTGTCGTCTTCCGGGGCTGAGCCCGAGTCCGAGCCCTGGGGTCGGGCAAAGCGGAGTTCATCGTCTTCCGGGGCTAAGCCCGAGTCCGAGCCCTGGGGTCGGGCGAAGCGGAGTTCGTCGTCTTCCAGGGCTGAGCCCGAGTCCGAGCCCTGGGGTCGGGCGAAGCAGAGGTCGTCGTCTTCCGGGGCTGAGCCCGAGTCCGAGCCCTGGGGTTGGGCGAAGCGGAGTTCGTCGTCTTCTGGGGCTGAGCCCGAGTCCGAGCCCTGGGGTCGGGCGAAGCGGAGTTTCCTATGGCGCCTGGGCCGGACTTGGCTGCTGTCAGCCTCACTCTGTCGAGTGGCACAGCCGTCAGAGCGGCGCAGGCGGCGCTGTCCTCTTGTCAGGCCGGTCAGTGGAGCGGCGAAGTGACTACAGTCACTTCGGCTCTATCAACTGGAGGGCGCGCGTCAGGATAAAGGTGTCAGGCCACCTTTGCATTAAATGCCCCTGCGATTTGGTCGGTTGGCGTGACGATTTGGCCAAGGTTTCTTCTTGGTGAAGACTGGGCCTCGGGCGAGCCGAAGGTGTGTCCGTTGCTGGAGGGGGTCCTCGGGCGAGACGTAAACCCTCCAGGGTCGGTTGCCCTTGCCCAAGGCTGGGCTGGGGCGAGGCGCGATCGCGTCCCTTGAATGGACCGATCCTTGACTTAATCGCACCCATCAGGCCTTTGCAGCTTTGTGCTGATGGGGGTTACCAGCTGAGATTTAGGAGTCTTGAGGGTACCCCTAATTATGGTCCCCGACAGAATGTAAAAACTGTTTCAGGGGTAGGATATCTCTCAATAGATATGCTTCGATTCTAGCACAGTACTGTTGACTGTGCGAGCTTCGGACTCCTCCCTGAAATCTCGCTGCTGATGGGTCTGTTGGCTCCCTTCTGGCTGCTGGGCTCGTGAATATATAGGTTGTAGTGGTGGCGGAGGTGGGGGTTGTGGCCAAGATGCCTGTGGCTGACTAGCCGAAGCAACAGACGCTGCAGGATGGTTACCCACATACTCTGGTATGTAGGGTGAGTGATACGAAGCAGTATGCATGACCTGCTTCGGATGGTTCTGCTGAGCTGTGGCTTCTGCTATTTCCTTTTGTTTTTGAATGGTGACGTGGCACATCCTTGTAGTATGGCCCTTGTCCTCACCACAGAATAAGCAATAAATTTTTCTAGGATGATCCCCAAACCTTCCTCCGAAGCCCCTGGCGCCTCTGCCTCTTGGAGCTGGCGGCCGGAAAGAGCTTTGTTGCTGCCCCGAAGCGTGCGAGGAATACTGTGGCCTCTGTTGTTGACTTCCTCTGTCGTCACTCTGGGTGGAGTGAATTGACCTGACATGCCTTGGGTGGATTCTTCCTCTGAAGCCCCTGGTCATCTCAGAGAACCTGTAGGCTTCCTCTCTTCTTTGGCGAAAGTCATTGTCAGCCCCGATGTATTCATCCATCTTTTGAAGCAGCTTCTCCAAAGTCTGTGGAGGCTTTCTAGCAAAGTACTGGGCAGTAGGTCCTGGACGAAGCCCCTTGATCATGGCCTCAATGACAATTTCATTGGGCACTGTAGGCGCTTGTGCTCTCAGACGCAAGAACCTTCGGACGTATGCCTGGAGATACTCCTCATGATCTTGCATGCATTGAAACAGAGCCTGAGCTGTGACTGGCTTCGTCTGAAAGCCCTGGAAACTTGTCACTGGTATATCCTTGAGCTTCTGCCATGAAGTAATAGTTCCTGGCTAAAGAGAAGAATACCACGTTTGGGCCACATTCTTAACTGCCATGACGAAGGACTTGGCCATGACAGCTGCGTTGCCTCCGTATGAAGATATAGTTGCTTCATAACTCATCAAAAACTGCTTCGGGTCTGAATGTCCATCATACATGGGGAGCTGAGGTGGCTTGTATGATGGAGGCCATGGGATAGCCTACATTTCTGCTGCCAAGGGAGAAGCATCATCAAAGGTAAAGGTATCATGATTAAAATCATTATACCATCCATCCTCGTTGAAGAAGCCTTCTTGGTGAAGCTCCCTTTGTTGGGGCCTTCGTTCTTGTTCGTCTTGAGCAAGATGGCGTACTTCTTCAGTGGCTTCGTCAATCTGCCTTTGAAGATCAGCTAGTCGAGCCATCTTCTCCTTCTTCCTTTGTACTTGTTGATGAAGCATCTCCATGTTTCTGATTTCTTGGTCCAACTCCTCCTCCTGGAGTGTTGGACTAGTGTCCTTCCTCTTCTGGCTTCAGGCCTCTCGAAGAGAAAGGGTATCCTGGTTTGGATCCAGTGGCTGCAGAGCAGCAACCCCTGTCGCTGAAGCTTTCTTCGGTGGCATGACAAAGGTCAGTGCTTGCCGAAGGTGGTCGAAAAGGATTCACAGGAGGTGGGCGCCAATGTTGGGGACTTGTTCTCAAATGCTATGAATCAAGAACAAGGCAACATAAAATGTTAAATGTTAACGCCCTTCGTCCTCCGAAACATTATTTTCCTAAGGTTATAATGATCTTCGGACAGAGGGCATGAAGGGCATACCTTCATCAATTTTTCATACATAAATGTATGATTATTAACAACGAATGGAGCATGTAAAGCATAAGAACAATGTGAACAACAACATTATCACACATATATTTCTTATCATATAAACGCAAATCAACATAAGAACAATATTGAATTACATTTGGTACCTTCGACTTGATAGACAGCAGAGGTACGAATGTGACGCAAAAGCAAATGCCAAGTCAGCGTGAACAGTACGGGAGCACTATTCATCTATCTATAGGCACGGGACGCAGCTCATGTAAAATTACACCCATGCCCTTTACATTTGCTAATGACTGTATAGTGATCCATCGAGGTCTAAATAGCCTTTTCCCCTTTTAAGTCGGTTCCCTTTTCTGCTGTCATGCCGAAGCTCCCTTGCGCGTAGCTTCAACGCTGCATCAACCTTCGTATTCTTTGTGCTTCTCACACTGTGGTTCTGATTCGAGTCCGAAGGTACCTGTTCATGTATTATACTCCAGAAACATTGTTAAATCATGTTTTTGAGGACCTTCGGAAGACGAAGGCCCCCAACACATGTGTTCTAGGCTTGCCACCTGGCTTGACGAGCGACCAGAAAGGGTGTGTTGACGTTAGTGTAACTCTCTGCAAATGCATAACAAATCATTAAATTATAGTCGAATCACTTGGATCGGCCTCTTTGAGCAGATTGTCATCTTTTTCTAGATTTGATAGTATCATAATCAATGAACGTAAACATGCATCAAAATTGGCCGATGAAGGAAATAAGCATGTCTAAATCATGCTTGAGTTGATTGTTTGCTCTAGAGCAACGTGGGCTATGTGCATGGCCAAAAGGGGACAATGGGCCAAAGAACCATCTCTATTACCTATGTTGCTAATCAAATCTAGAGCCAGATAAATGGCATACCATCTATAAAAACATCCTAGATCTAATTTATAACATGTATCATATTGGTAATCCCAGGATTATCCACTACTAAGAATCGATGACCACACATGTGAACATGGATTAGGGCCTCTAAAGAAGTTCAATTAGAGCAAACAATGAGACTAAACTTGTAAGACAAGGTGCTAGATGTGTATCGGTCTTCCAAGTTATCGCATGCACATGTGCATCTTGCATACCATGGACTGTAGCAATCGGTCGAGGAATACACATGTGGTAGTGTAAAATCAATCAAATAACATGAAGCTTAAATATAAATATAGATTGAAACTATACATGATAACTAGCAGATGTTGCTAGCAACAACACTTAGTACAAGATCTACTGGGTAAGGTGGTGACACAATGCTACCCTGCACACAACTGATAGTCACGTAGAGGGGGTGAATAGGTGATGCTTAAAAACACATCTTAAACAAAAACTTGATCTAAATTAAGTGTTAGCCCAAAATAGATCAAGACATAGTGAGTAAGAGAAGTGGTTCTTGCACTTGATCGCTCTCACAAGATTGCGGAATTAACTTGAGCAATATTACAAGTGAAGTGTAGAGATGAAGTAAAAAATCACAAGAGAATAAGCACTCAAGGCACATCGATTTTTAACGTGGTTCGGTCAAACCTCAAATGCTTTCATTGGACTTGGCCTAGTGCGCCACAGCACCGGTCCGATGAGTCCCAGATTGCTGCTCTTAAGTCCTTTATTAGCCAACTTTGTTCCATTGGACTTGGCCTTTCTTGTGAGCTTCCATACGACTTAGACAAACATAGTTAGAGTATAATCAATTGAACTAAGTCAAGGAAACTCACCTCTTTCTCATCATTTCACCAGGATTTGAGTTATAGCTCAAACTAAGTCCAAAATGCACTTCTCTCATGAAACCGAGTTAGACATCAAACTTAAGTGCTAGAAACATTGTAATATGCATATGCAACTTATCTAAAGGTTCAAACCTCATAGTTTTATCATTTTACTCAAAGTTGCACTTCTTAGCCTCTTTTAAGCTCTTTTGGACTTAGAATCCTCAAATTGCATACAAGTGAACATGTGCTCATCACTTAGCAAACAAGTTAGTTCATGTTGTTATGTTGGACATTCAATCACCAAAATAGTAGAAATGCTAACTTCCACATTTCCCTTTCAACGATCAAAGACCGCATCAAGACAGCATGGCGCTTACCTTGAGAAACCATTAGGGAAGGGGTTGGCTGGGTTGTGATGCGCCCGAGAGAATGAGAAGCACCTGCTGCTTGACGAACGAATGCCTTTTTTTATTATGCCGTATTTGTTACAATATATAGACATATGGACTTAAAGTGATAAGCAATTCCTAACTTACATTTGCCATCCCATCTACTACTTATGTATGGTAAAAATACCTTATTCCTAGTATGCACATCTATTTTCCAATGGACCAAACACTTCCTTTTGTAGAGTACTTCAACCGAAACAGTAGTATCAGTTCGGTTGGGATTTGGTGCCAACATATGCAAACTGAATATTTGATGCTAATGAGATTTAGGTCACAAGTGGAAACACATTCTCACTTGGAGGTGACACTATTTCATGGAAGTCTTGCAGGTAGACTATCTTAATGAGTTCAACAATGGAAGCAAAACTTACAACATTAGATACCACCACAGTTGAAGATGAGAGGCTTCATGATTTCCTTATGACTATTGACTATTGGGCATTCTCTCATATGTTATTGTAGTGGTCCGGGCGGTCTTATGAAGAAGCTTGTAGGGTGCTTCCAGCCCAAGCACCCTCGTGCAGATGATACCGATTATAACCCTGTTACTAACTCTGAAGCTCAATCATCAGGTAGTGGCAGTGTTTCACTGGATACTGAAGATGCGCCCCATAGTCATCCTGACTTTAATATTGACATCACAGGATAGACCTATGCCAAGAGGAGGTTCTCAATGGCAGAATATTACTCCAAGATGATAGTCAATCAGTGCTCCCTCCCTTATGACACCAACATCCAGTACTTCCACGCTCAGCTCCAATTCGATGTGTTCTAGGGGACTCTTATGGATACCAACTTTCACAAGCATCAAGTTATTGATTGGGAATACATGCAAAGTCAGTCAGTGATGGAGGGTTTAATTCCTAAGTTCAAGGCTTGTGGCCTATATGACTTTATGGATCAACAAATTGATTTCAGTGAGATGACAATCAAGCAATTTCTTGCCACTCTAGAGATCAATATTGAAGCCCAATTGATAGTATGGATGACTGGATTTAAGAGGTATGTTGCAACTTTTGTTGAGTTTGCTACTGCCAACAGTTTGGATTATGATGTGTCTCGTTAGAGATTGATTTGTATACTAAGGAACATTTCAAAGACTTCGTGCAGTACTATGAGCCTATGAGGCTAGGCATCCCTATGAGGTTTGGTGAGACTCTAGGGCTCAGGCATCACCTAGATGTCATAAATAAGATTGCCCGAGTGGCCATTCTGCCAAAGAGTGGCGATAAGAGCAAGATCAGAGATAAGTTTTGGAATATTATCCACCATGTCATGAAGTGTGAGGTGATGAATGTAGTCTTGTTTATGATGAAGCAAATCAACCATCTCAAGATGGACAAGAAACATAACTTGACCTATGCTCCATATATTATGCCTCTGATCCATGCTAAGACAATATTTTAGGGCAGGTGTGAGATAGCACACACTCCTTTCAGGCCCTTTAAAAATGAGATTGGATTCCTCACCAGGCCTCTCACTCTCTTACCTGATGATGAGGAAGCGGTTGGGGATGAAGAAGAAGTTAATCCTGAGGAAGATCCAGCTCAGCAGATGCCTCCTCAACATGAGCAGTTCTGATGGCCTAGCCCAGGGTATATTGATCCTTACTTCCAGCATATGCAGCATGGGACTCAGACTTGATGACCCACATGGATGGCAGATTTGATGCTATGCAGACTCATTTTGATGGCTAGTACTCTACAATGACATCAAGCCTCAGCGCTATTGACGATTAGTTTGATGGGCTGAACTCTGAGTTTGCTGATCTTCGCACTCACATCTAGTACACCATTCATGATCCAATCATGACCAGAATGAACAACATGCAACAGAGTTTTCAGGATAATATGGGTGCCCTGTCTAACCAGTTTGAGAGTCCCTCTACCAGTGACAACATTCACACGCTTGATCAGAGGCAACAACATCTCCAGAATGATTTTCGTCAGTTAACCTCCATCTTTGACAGCTTCAGCTCTCACTACTACAACATGTATCTGCGTCCTCCATCTAGTAGCTAGTGAGGCCCCTCTTTTGTGGAAATTGATGCCAACGGGGAGAGATGAAGATGAAATGAAGATGGGGATTTCATAGTCACGGGGAGCTTGATTGGACATTTAGACTTTGCATGTGCATGTTTATTATCTGCACATTATATTTTATGCATGTCTTATGTAGTTTGTGGACAAATATCTAGGTTTCAAACTATGTTTGTTAAAATCTTATGTTTCTATGAGTTCGAAGTATCTTGCAAATGGTTGATCGAGGGGTGACTGAATTTACTGCGCTTATTTCATATCTTATTACACTTGCATGCCTCAATAACCATGATTGTAGGAAGATCTCCACCAAAACTTTGATCTATTATGTGTGTGAAATCTTCAACTAGAACTTCAAATTATGAAATTATCTGCCAAAATTATCTATTACATGTAGGGGGAGCTATTTCTACATCCTGAGTTTTGTCCTAACTTATCTATCCTTCAAATGGAACTTCAAATCAAGATGAGTCACTCGAAACTCACTCCTCAAATCCTTCTTATACCTAGTGTGTGAGGAAGATTTGAAAAACCGAAACAACCTCTGTATGAAATTTATAGTGTTGTCATCAATTACCAAAAAGGGGGAGATTGTGAATCATCTAGGCCCTTTAGTGACGTTTTGGTAATTAATGACAACCATTTATGGACTAACAATTCTGAGAGAAATAGAAATGCAGGTTGGACCACAGAGGGAAGTATGTTTTGGAGACTTAAAACATTGGTTGTGGATCAAGTGATGGCAAAGGTATAACATAGGTTTTGTTTTGCCGGTCACCAGGTGTTTAGAGAATAAATTGATCGGATTAGTAGGCTAGATAGTCGTACTATAAAGAGGGGGTCAATAACTTTGGTCTGTGTAAAACTTAGTACCTCATAGAGCATCTAATAGTTGCATTTGCATGAGGACTAACAACGCTTATGATTTCGAGAGTTATTTTTCAAAAGTGTGTTTAGAAAGTGGGTATGATCTATGGTCGGTGGATCGTCCGGGCCAGGAGGCTAGACCATTCGCGTCTCACTTAGAGAGGTCCGAAGTATGTTCATTTCAGAGTGGTCCGGAATATTGGTACTGCGGACCGTTCAGGACTTGGGGCCGGACCATTCGTAGTCCTGACCAGAGAGGGTCTGAGTTGCACAAGACCCTGTGTGCTTGTGCGGACTGTCCGGTCAGGGTTGGCAGACCGTTCGCAGGTGAAAAACAGATCTAGGCATGGACTGTGTGTTTTTGGTCGAATGTACTACAGGATGTCCGGGGTTTGAGACCGGACAGTACTAACTCCCAGTTCACGGATCGTCCAACATTGGAGGACGAACAGTTCGCCAGTGTAAAACAACTTGGTCAATACTCGGGCGCTTCAAGTTGCCAGGTCTCGAACCGTCCAGACCTGCCTTTTCTGACAGCTCTGACAAATTTCAAACAGGAAAAGTAGCCGTTACTCGTATGATGAACCGTCCGACCGTAGGGCATGGACCATTCACATATGCGCAGAAGGTGTGCTACTTGCACATAACGGCTATTAAAGAGAGGAGAGCTATAAATAGAAGTGGAGCTCGTGTGCGAGGACTCTCTTTGCCATTCCTAGCATACATTGCGCTCATTTGTGATCCTCCAACTCATTCTCTCACACTCTTTGTTTGGCATTGCATTATAGTGAGAGATTGAGAGCTCCTAGTGCATTTGCATCATTTGTCGATTCTTGAGGAACTAGGTGGTACACCGAGCAAGCGTCATCAGCTTGTTACTCTTGGAGGGTGCTGCCTCCTAGACGGCTCAGGTGTTGTCTCCATCGAGTTCTCTGTGAAGATTGTGGAGGAGTCGTGGTGTTGATTTTGAGGGGTTTGCGCCTATCTTGTCGGAGCGGCAAATGCGACACTAGTGGAATCGAGGTATTGAGTGATTCCTTATCCACTTGGCTCAAAGATCAAGCCATGTCTTGATAGAGGAGCAAGTGAGAGTTTGAAGTCCACCTTAACGTGGATTATGGGTGATCGGCAAATCATCAATACTACGAGATAAAATTTGGTGTCGTTCTCTTCACTCGTTACTTATTACTTTGCAAGTAGTTAATAATTTATGTATTTCCTTTCATTTCTAGCATTGCCATAGTTGTCTCTCATAAATTGCTTACTTGTTGAATCTCTTATCATATTGATTAAATTTCTCTAGTGTCTTTGATTTTAGTCAAAACCATTTATTCACCCCCTCTAGCCGATGTTCTAGATCTTACACATAGCTGCTGGAAGAGCCGTCGAGAGTCGTTCGTGGCCAAGGCGCCCGTGGCCAGACCCTGCAGCTGCACTGACAGAATTGCATAGATGGGCTCGGCAATGGGAGGACGAGGTAGGAACGAAGCTGCATCGGGGAAGGGCAGAGGATCCTAGCCCTGGGGATTGGCTAGGTCGGAGTTGGAGGAATCAATGTCGGTTCCCTCGACATTTTCGTTGCCGTTGGCAGAGGAGGAGACCACATTGATGTGATGGTCGTCGTCGGGTATGACTGGGTTGGGTTTGGGGTCGGGATTGGATAG |
gene1 |
maker |
gene |
1 |
4533 |
. |
+ |
. |
ID=gene1;NAME=gene1;Alias=maker-scaffold1.2234-augustus-gene-0.0; |
gene1 |
maker |
mRNA |
1 |
4533 |
. |
+ |
. |
ID=gene1_T001;Parent=gene1;NAME=gene1_T001;Alias=maker-scaffold1.2234-augustus-gene-0.0-mRNA-1;_AED=0.05;_QI=0|0|0|0.5|1|1|2|0|690;_eAED=0.05; |
gene1 |
maker |
exon |
1 |
2019 |
. |
+ |
. |
ID=gene1_T001:exon:467;Parent=gene1_T001; |
gene1 |
maker |
exon |
4480 |
4533 |
. |
+ |
. |
ID=gene1_T001:exon:468;Parent=gene1_T001; |
gene1 |
maker |
CDS |
1 |
2019 |
. |
+ |
0 |
ID=gene1_T001:cds;Parent=gene1_T001; |
gene1 |
maker |
CDS |
4480 |
4533 |
. |
+ |
0 |
ID=gene1_T001:cds;Parent=gene1_T001; |
gene2 |
maker |
gene |
1 |
4725 |
. |
+ |
. |
ID=gene2;NAME=gene2;Alias=maker-scaffold4.163-snap-gene-0.20; |
gene2 |
maker |
mRNA |
1 |
4725 |
. |
+ |
. |
ID=gene2_T001;Parent=gene2;NAME=gene2_T001;Alias=maker-scaffold4.163-snap-gene-0.20-mRNA-1;_AED=0.32;_QI=0|0.4|0.33|1|0.2|0.33|6|0|383;_eAED=0.32; |
gene2 |
maker |
exon |
1 |
298 |
. |
+ |
. |
ID=gene2_T001:exon:40;Parent=gene2_T001; |
gene2 |
maker |
exon |
329 |
341 |
. |
+ |
. |
ID=gene2_T001:exon:41;Parent=gene2_T001; |
gene2 |
maker |
exon |
1283 |
1372 |
. |
+ |
. |
ID=gene2_T001:exon:42;Parent=gene2_T001; |
gene2 |
maker |
exon |
2811 |
2926 |
. |
+ |
. |
ID=gene2_T001:exon:43;Parent=gene2_T001; |
gene2 |
maker |
exon |
3721 |
3848 |
. |
+ |
. |
ID=gene2_T001:exon:44;Parent=gene2_T001; |
gene2 |
maker |
exon |
4222 |
4725 |
. |
+ |
. |
ID=gene2_T001:exon:45;Parent=gene2_T001; |
gene2 |
maker |
CDS |
1 |
298 |
. |
+ |
0 |
ID=gene2_T001:cds;Parent=gene2_T001; |
gene2 |
maker |
CDS |
329 |
341 |
. |
+ |
2 |
ID=gene2_T001:cds;Parent=gene2_T001; |
gene2 |
maker |
CDS |
1283 |
1372 |
. |
+ |
1 |
ID=gene2_T001:cds;Parent=gene2_T001; |
gene2 |
maker |
CDS |
2811 |
2926 |
. |
+ |
1 |
ID=gene2_T001:cds;Parent=gene2_T001; |
gene2 |
maker |
CDS |
3721 |
3848 |
. |
+ |
2 |
ID=gene2_T001:cds;Parent=gene2_T001; |
gene2 |
maker |
CDS |
4222 |
4725 |
. |
+ |
0 |
ID=gene2_T001:cds;Parent=gene2_T001; |
gene3 |
maker |
gene |
1 |
3961 |
. |
+ |
. |
ID=gene3;NAME=gene3;Alias=augustus_masked-scaffold2.263-processed-gene-0.10; |
gene3 |
maker |
mRNA |
1 |
3961 |
. |
+ |
. |
ID=gene3_T001;Parent=gene3;NAME=gene3_T001;Alias=augustus_masked-scaffold2.263-processed-gene-0.10-mRNA-1;_AED=0.09;_QI=318|1|1|1|0.75|0.6|5|330|381;_eAED=0.09; |
gene3 |
maker |
exon |
1 |
407 |
. |
+ |
. |
ID=gene3_T001:exon:123;Parent=gene3_T001; |
gene3 |
maker |
exon |
524 |
738 |
. |
+ |
. |
ID=gene3_T001:exon:124;Parent=gene3_T001; |
gene3 |
maker |
exon |
1585 |
1993 |
. |
+ |
. |
ID=gene3_T001:exon:125;Parent=gene3_T001; |
gene3 |
maker |
exon |
3108 |
3552 |
. |
+ |
. |
ID=gene3_T001:exon:126;Parent=gene3_T001; |
gene3 |
maker |
exon |
3644 |
3961 |
. |
+ |
. |
ID=gene3_T001:exon:127;Parent=gene3_T001; |
gene3 |
maker |
five_prime_UTR |
1 |
318 |
. |
+ |
. |
ID=gene3_T001:five_prime_utr;Parent=gene3_T001; |
gene3 |
maker |
CDS |
319 |
407 |
. |
+ |
0 |
ID=gene3_T001:cds;Parent=gene3_T001; |
gene3 |
maker |
CDS |
524 |
738 |
. |
+ |
1 |
ID=gene3_T001:cds;Parent=gene3_T001; |
gene3 |
maker |
CDS |
1585 |
1993 |
. |
+ |
2 |
ID=gene3_T001:cds;Parent=gene3_T001; |
gene3 |
maker |
CDS |
3108 |
3540 |
. |
+ |
1 |
ID=gene3_T001:cds;Parent=gene3_T001; |
gene3 |
maker |
three_prime_UTR |
3541 |
3552 |
. |
+ |
. |
ID=gene3_T001:three_prime_utr;Parent=gene3_T001; |
gene3 |
maker |
three_prime_UTR |
3644 |
3961 |
. |
+ |
. |
ID=gene3_T001:three_prime_utr;Parent=gene3_T001; |
gene4 |
maker |
gene |
1 |
3276 |
. |
+ |
. |
ID=gene4;NAME=gene4;Alias=maker-scaffold2.3673-augustus-gene-0.11; |
gene4 |
maker |
mRNA |
1 |
3276 |
. |
+ |
. |
ID=gene4_T001;Parent=gene4;NAME=gene4_T001;Alias=maker-scaffold2.3673-augustus-gene-0.11-mRNA-1;_AED=0.21;_QI=211|1|1|1|1|1|4|283|369;_eAED=0.21; |
gene4 |
maker |
exon |
2540 |
3276 |
. |
+ |
. |
ID=gene4_T001:exon:875;Parent=gene4_T001; |
gene4 |
maker |
exon |
1538 |
1847 |
. |
+ |
. |
ID=gene4_T001:exon:874;Parent=gene4_T001; |
gene4 |
maker |
exon |
849 |
1052 |
. |
+ |
. |
ID=gene4_T001:exon:873;Parent=gene4_T001; |
gene4 |
maker |
exon |
1 |
353 |
. |
+ |
. |
ID=gene4_T001:exon:872;Parent=gene4_T001; |
gene4 |
maker |
five_prime_UTR |
1 |
211 |
. |
+ |
. |
ID=gene4_T001:five_prime_utr;Parent=gene4_T001; |
gene4 |
maker |
CDS |
212 |
353 |
. |
+ |
0 |
ID=gene4_T001:cds;Parent=gene4_T001; |
gene4 |
maker |
CDS |
849 |
1052 |
. |
+ |
2 |
ID=gene4_T001:cds;Parent=gene4_T001; |
gene4 |
maker |
CDS |
1538 |
1847 |
. |
+ |
2 |
ID=gene4_T001:cds;Parent=gene4_T001; |
gene4 |
maker |
CDS |
2540 |
2993 |
. |
+ |
1 |
ID=gene4_T001:cds;Parent=gene4_T001; |
gene4 |
maker |
three_prime_UTR |
2994 |
3276 |
. |
+ |
. |
ID=gene4_T001:three_prime_utr;Parent=gene4_T001; |
gene5 |
maker |
gene |
1 |
5268 |
. |
+ |
. |
ID=gene5;NAME=gene5;Alias=maker-scaffold1.3258-snap-gene-1.10; |
gene5 |
maker |
mRNA |
1 |
5268 |
. |
+ |
. |
ID=gene5_T001;Parent=gene5;NAME=gene5_T001;Alias=maker-scaffold1.3258-snap-gene-1.10-mRNA-1;_AED=0.08;_QI=589|1|1|1|1|1|7|408|319;_eAED=0.08; |
gene5 |
maker |
exon |
1 |
778 |
. |
+ |
. |
ID=gene5_T001:exon:665;Parent=gene5_T001; |
gene5 |
maker |
exon |
928 |
1227 |
. |
+ |
. |
ID=gene5_T001:exon:666;Parent=gene5_T001; |
gene5 |
maker |
exon |
1361 |
1544 |
. |
+ |
. |
ID=gene5_T001:exon:667;Parent=gene5_T001; |
gene5 |
maker |
exon |
2235 |
2283 |
. |
+ |
. |
ID=gene5_T001:exon:668;Parent=gene5_T001; |
gene5 |
maker |
exon |
2821 |
2896 |
. |
+ |
. |
ID=gene5_T001:exon:669;Parent=gene5_T001; |
gene5 |
maker |
exon |
3119 |
3196 |
. |
+ |
. |
ID=gene5_T001:exon:670;Parent=gene5_T001; |
gene5 |
maker |
exon |
4777 |
5268 |
. |
+ |
. |
ID=gene5_T001:exon:671;Parent=gene5_T001; |
gene5 |
maker |
five_prime_UTR |
1 |
589 |
. |
+ |
. |
ID=gene5_T001:five_prime_utr;Parent=gene5_T001; |
gene5 |
maker |
CDS |
590 |
778 |
. |
+ |
0 |
ID=gene5_T001:cds;Parent=gene5_T001; |
gene5 |
maker |
CDS |
928 |
1227 |
. |
+ |
0 |
ID=gene5_T001:cds;Parent=gene5_T001; |
gene5 |
maker |
CDS |
1361 |
1544 |
. |
+ |
0 |
ID=gene5_T001:cds;Parent=gene5_T001; |
gene5 |
maker |
CDS |
2235 |
2283 |
. |
+ |
2 |
ID=gene5_T001:cds;Parent=gene5_T001; |
gene5 |
maker |
CDS |
2821 |
2896 |
. |
+ |
1 |
ID=gene5_T001:cds;Parent=gene5_T001; |
gene5 |
maker |
CDS |
3119 |
3196 |
. |
+ |
0 |
ID=gene5_T001:cds;Parent=gene5_T001; |
gene5 |
maker |
CDS |
4777 |
4860 |
. |
+ |
0 |
ID=gene5_T001:cds;Parent=gene5_T001; |
gene5 |
maker |
three_prime_UTR |
4861 |
5268 |
. |
+ |
. |
ID=gene5_T001:three_prime_utr;Parent=gene5_T001; |
gene6 |
maker |
gene |
1 |
1464 |
. |
+ |
. |
ID=gene6;NAME=gene6;Alias=augustus_masked-scaffold5.3243-processed-gene-0.8; |
gene6 |
maker |
mRNA |
1 |
1464 |
. |
+ |
. |
ID=gene6_T001;Parent=gene6;NAME=gene6_T001;Alias=augustus_masked-scaffold5.3243-processed-gene-0.8-mRNA-1;_AED=0.04;_QI=0|0|0|1|1|1|2|0|397;_eAED=0.04; |
gene6 |
maker |
exon |
1 |
873 |
. |
+ |
. |
ID=gene6_T001:exon:610;Parent=gene6_T001; |
gene6 |
maker |
exon |
1144 |
1464 |
. |
+ |
. |
ID=gene6_T001:exon:609;Parent=gene6_T001; |
gene6 |
maker |
CDS |
1 |
873 |
. |
+ |
0 |
ID=gene6_T001:cds;Parent=gene6_T001; |
gene6 |
maker |
CDS |
1144 |
1464 |
. |
+ |
0 |
ID=gene6_T001:cds;Parent=gene6_T001; |
gene7 |
maker |
gene |
1 |
1513 |
. |
+ |
. |
ID=gene7;NAME=gene7;Alias=maker-scaffold6.1711-augustus-gene-0.8; |
gene7 |
maker |
mRNA |
1 |
1513 |
. |
+ |
. |
ID=gene7_T001;Parent=gene7;NAME=gene7_T001;Alias=maker-scaffold6.1711-augustus-gene-0.8-mRNA-1;_AED=0.14;_QI=0|0.66|0.5|1|1|1|4|547|198;_eAED=0.14; |
gene7 |
maker |
exon |
941 |
1513 |
. |
+ |
. |
ID=gene7_T001:exon:245;Parent=gene7_T001; |
gene7 |
maker |
exon |
765 |
826 |
. |
+ |
. |
ID=gene7_T001:exon:244;Parent=gene7_T001; |
gene7 |
maker |
exon |
332 |
625 |
. |
+ |
. |
ID=gene7_T001:exon:243;Parent=gene7_T001; |
gene7 |
maker |
exon |
1 |
215 |
. |
+ |
. |
ID=gene7_T001:exon:242;Parent=gene7_T001; |
gene7 |
maker |
CDS |
1 |
215 |
. |
+ |
0 |
ID=gene7_T001:cds;Parent=gene7_T001; |
gene7 |
maker |
CDS |
332 |
625 |
. |
+ |
1 |
ID=gene7_T001:cds;Parent=gene7_T001; |
gene7 |
maker |
CDS |
765 |
826 |
. |
+ |
1 |
ID=gene7_T001:cds;Parent=gene7_T001; |
gene7 |
maker |
CDS |
941 |
966 |
. |
+ |
2 |
ID=gene7_T001:cds;Parent=gene7_T001; |
gene7 |
maker |
three_prime_UTR |
967 |
1513 |
. |
+ |
. |
ID=gene7_T001:three_prime_utr;Parent=gene7_T001; |
gene8 |
maker |
gene |
1 |
2540 |
. |
+ |
. |
ID=gene8;NAME=gene8;Alias=maker-scaffold7.2536-augustus-gene-0.3; |
gene8 |
maker |
mRNA |
1 |
2540 |
. |
+ |
. |
ID=gene8_T001;Parent=gene8;NAME=gene8_T001;Alias=maker-scaffold7.2536-augustus-gene-0.3-mRNA-1;_AED=0.21;_QI=53|0.5|0|1|1|0.66|3|0|291;_eAED=0.21; |
gene8 |
maker |
exon |
1 |
308 |
. |
+ |
. |
ID=gene8_T001:exon:488;Parent=gene8_T001; |
gene8 |
maker |
exon |
1823 |
2176 |
. |
+ |
. |
ID=gene8_T001:exon:489;Parent=gene8_T001; |
gene8 |
maker |
exon |
2277 |
2540 |
. |
+ |
. |
ID=gene8_T001:exon:490;Parent=gene8_T001; |
gene8 |
maker |
five_prime_UTR |
1 |
53 |
. |
+ |
. |
ID=gene8_T001:five_prime_utr;Parent=gene8_T001; |
gene8 |
maker |
CDS |
54 |
308 |
. |
+ |
0 |
ID=gene8_T001:cds;Parent=gene8_T001; |
gene8 |
maker |
CDS |
1823 |
2176 |
. |
+ |
0 |
ID=gene8_T001:cds;Parent=gene8_T001; |
gene8 |
maker |
CDS |
2277 |
2540 |
. |
+ |
0 |
ID=gene8_T001:cds;Parent=gene8_T001; |
gene9 |
maker |
gene |
1 |
41220 |
. |
+ |
. |
ID=gene9;NAME=gene9;Alias=snap_masked-scaffold8.107-processed-gene-0.8; |
gene9 |
maker |
mRNA |
1 |
41220 |
. |
+ |
. |
ID=gene9_T001;Parent=gene9;NAME=gene9_T001;Alias=snap_masked-scaffold8.107-processed-gene-0.8-mRNA-1;_AED=0.04;_QI=0|0|0|0.5|1|1|2|0|379;_eAED=0.04; |
gene9 |
maker |
exon |
1 |
1067 |
. |
+ |
. |
ID=gene9_T001:exon:16;Parent=gene9_T001; |
gene9 |
maker |
exon |
41148 |
41220 |
. |
+ |
. |
ID=gene9_T001:exon:15;Parent=gene9_T001; |
gene9 |
maker |
CDS |
1 |
1067 |
. |
+ |
0 |
ID=gene9_T001:cds;Parent=gene9_T001; |
gene9 |
maker |
CDS |
41148 |
41220 |
. |
+ |
1 |
ID=gene9_T001:cds;Parent=gene9_T001; |
gene1 |
SMAP_CRISPR |
border_up |
1778 |
1790 |
. |
+ |
. |
NAME=gene1_1 POOL=pool_1 LENGTH=121 AMPLICON=A01 |
gene1 |
SMAP_CRISPR |
border_down |
1866 |
1878 |
. |
+ |
. |
NAME=gene1_1 POOL=pool_1 LENGTH=121 AMPLICON=A01 |
gene2 |
SMAP_CRISPR |
border_up |
3739 |
3751 |
. |
+ |
. |
NAME=gene2_1 POOL=pool_1 LENGTH=128 AMPLICON=A02 |
gene2 |
SMAP_CRISPR |
border_down |
3832 |
3844 |
. |
+ |
. |
NAME=gene2_1 POOL=pool_1 LENGTH=128 AMPLICON=A02 |
gene3 |
SMAP_CRISPR |
border_up |
3066 |
3078 |
. |
+ |
. |
NAME=gene3_1 POOL=pool_1 LENGTH=123 AMPLICON=A03 |
gene3 |
SMAP_CRISPR |
border_down |
3158 |
3170 |
. |
+ |
. |
NAME=gene3_1 POOL=pool_1 LENGTH=123 AMPLICON=A03 |
gene4 |
SMAP_CRISPR |
border_up |
815 |
827 |
. |
+ |
. |
NAME=gene4_1 POOL=pool_1 LENGTH=118 AMPLICON=A04 |
gene4 |
SMAP_CRISPR |
border_down |
906 |
918 |
. |
+ |
. |
NAME=gene4_1 POOL=pool_1 LENGTH=118 AMPLICON=A04 |
gene5 |
SMAP_CRISPR |
border_up |
1178 |
1190 |
. |
+ |
. |
NAME=gene5_1 POOL=pool_1 LENGTH=132 AMPLICON=A05 |
gene5 |
SMAP_CRISPR |
border_down |
1273 |
1285 |
. |
+ |
. |
NAME=gene5_1 POOL=pool_1 LENGTH=132 AMPLICON=A05 |
gene6 |
SMAP_CRISPR |
border_up |
692 |
704 |
. |
+ |
. |
NAME=gene6_1 POOL=pool_1 LENGTH=125 AMPLICON=A06 |
gene6 |
SMAP_CRISPR |
border_down |
782 |
794 |
. |
+ |
. |
NAME=gene6_1 POOL=pool_1 LENGTH=125 AMPLICON=A06 |
gene7 |
SMAP_CRISPR |
border_up |
292 |
304 |
. |
+ |
. |
NAME=gene7_1 POOL=pool_1 LENGTH=125 AMPLICON=A07 |
gene7 |
SMAP_CRISPR |
border_down |
391 |
403 |
. |
+ |
. |
NAME=gene7_1 POOL=pool_1 LENGTH=125 AMPLICON=A07 |
gene8 |
SMAP_CRISPR |
border_up |
1755 |
1767 |
. |
+ |
. |
NAME=gene8_1 POOL=pool_1 LENGTH=125 AMPLICON=A08 |
gene8 |
SMAP_CRISPR |
border_down |
1855 |
1867 |
. |
+ |
. |
NAME=gene8_1 POOL=pool_1 LENGTH=125 AMPLICON=A08 |
gene9 |
SMAP_CRISPR |
border_up |
303 |
315 |
. |
+ |
. |
NAME=gene9_1 POOL=pool_1 LENGTH=131 AMPLICON=A09 |
gene9 |
SMAP_CRISPR |
border_down |
403 |
415 |
. |
+ |
. |
NAME=gene9_1 POOL=pool_1 LENGTH=131 AMPLICON=A09 |
gene1 |
CLC |
CRISPR_guide |
1812 |
1834 |
. |
- |
. |
NAME=gene1_1 |
gene2 |
CLC |
CRISPR_guide |
3779 |
3801 |
. |
+ |
. |
NAME=gene2_1 |
gene3 |
CLC |
CRISPR_guide |
3116 |
3138 |
. |
- |
. |
NAME=gene3_1 |
gene4 |
CLC |
CRISPR_guide |
845 |
867 |
. |
+ |
. |
NAME=gene4_1 |
gene5 |
CLC |
CRISPR_guide |
1207 |
1229 |
. |
- |
. |
NAME=gene5_1 |
gene6 |
CLC |
CRISPR_guide |
736 |
758 |
. |
- |
. |
NAME=gene6_1 |
gene7 |
CLC |
CRISPR_guide |
323 |
345 |
. |
+ |
. |
NAME=gene7_1 |
gene8 |
CLC |
CRISPR_guide |
1809 |
1831 |
. |
+ |
. |
NAME=gene8_1 |
gene9 |
CLC |
CRISPR_guide |
334 |
356 |
. |
- |
. |
NAME=gene9_1 |
Reference |
Locus |
Haplotypes |
Target |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
GGCTCTGTTCTTTTACTCGGCCCTGTTTGACGCTCTGGACACGACCACTCCAAGAGACAGCAACCAGAGGATGCT |
gene1 |
100 |
100 |
100 |
100 |
100 |
100 |
100 |
100 |
gene2 |
gene2_1 |
AGTGCTAGGTGATGCTGCGCGAGTACTGCGAGATCTAATCACTCAAGTGGAATCTCTCAGGCAGGAACAATCTGCTCTTG |
gene2 |
49.5 |
52.8 |
57.2 |
52.3 |
45.9 |
50.1 |
||
gene2 |
gene2_1 |
AGTGCTAGGTGTTGCTGCGCGAGTACTGCGAGATCTAATCACTCAAGTGGAATCTCTCAGGCAGGAGCAATCTGCTCTTG |
gene2 |
50.5 |
47.2 |
48.2 |
47.7 |
49.9 |
|||
gene2 |
gene2_1 |
AGTGCTAGGTGATGCTGCGCGAGTACTGCGAGATCTAATCACAAGTGGAATCTCTCAGGCAGGAACAATCTGCTCTTG |
gene2 |
51.8 |
45 |
||||||
gene2 |
gene2_1 |
AGTGCTAGGTGTTGCTGCGCGAGTACTGCGAGATCTAATCAAAGTGGAATCTCTCAGGCAGGAGCAATCTGCTCTTG |
gene2 |
55 |
42.8 |
54.1 |
|||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
100 |
97 |
44.3 |
48 |
4.2 |
5 |
||
gene3 |
gene3_1 |
CTGACGTGCTCACGTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
3 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACATCCAGCTCT |
gene3 |
5.6 |
|||||||
gene3 |
gene3_1 |
CTGACGTACTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
4.4 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
47.9 |
55.5 |
47.6 |
40.3 |
47.5 |
56 |
||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
44.5 |
7.6 |
9 |
|||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACTGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
3 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
24.6 |
22 |
||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGTGAAGTCTCTGTCGGACGAGCCCAGCCAGCTCT |
gene3 |
3 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
2.2 |
59.7 |
4.2 |
2 |
||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
4.2 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
1.7 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
2.5 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
47.6 |
|||||||
gene3 |
gene3_1 |
CTGACGTTGCTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
3.5 |
|||||||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
100 |
98.8 |
48.3 |
64.8 |
98.4 |
98.7 |
53.6 |
41.9 |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGAGAACCT |
gene4 |
1.2 |
1.6 |
1.3 |
|||||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGACTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
1.5 |
|||||||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGTCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
51.7 |
35.2 |
46.4 |
55.3 |
||||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
1.3 |
|||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
100 |
100 |
38.3 |
45.4 |
43.7 |
42.8 |
4.5 |
2.2 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACACAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
1.7 |
|||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACTCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
1.2 |
3 |
||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
2.1 |
12.3 |
18.5 |
|||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
6 |
4.3 |
||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
1.7 |
45.5 |
||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACTCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
54.6 |
1.9 |
2.3 |
|||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
21.3 |
|||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
1.2 |
1.2 |
||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
59.6 |
56.3 |
57.2 |
71.2 |
||||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
100 |
96.7 |
52.6 |
100 |
50.2 |
100 |
100 |
|
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGCCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
1.1 |
|||||||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCATACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
1.1 |
|||||||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCGTACATTTTCTGTGGTGGGTTGAGGGGAAGGA |
gene6 |
1.1 |
3.4 |
||||||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCCGGTCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
47.4 |
96.6 |
49.8 |
|||||
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGGCCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
100 |
100 |
41.8 |
53.1 |
49.2 |
51.1 |
44 |
44.4 |
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGGACCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
58.2 |
46.9 |
50.8 |
48.9 |
1.4 |
55.6 |
||
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGCCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
54.6 |
|||||||
gene8 |
gene8_1 |
GCTGAATATTTTTTTCTCTTTGGTTTGTTGCTGTTGTTGTTGTTGGCTGATGCAGGGCTTCAGGAAGATAGTGGCGGACAGGTGGGA |
gene8 |
100 |
98.4 |
55 |
65.5 |
54.6 |
52.5 |
63.6 |
51.5 |
gene8 |
gene8_1 |
GCTGAATATTTTTTTCTCTTTGGTTTGTTGCTGTTGTTGTTGTTGGCTGATGCAGGGCTTTCAGGAAGATAGTGGCGGACAGGTGGGA |
gene8 |
1.6 |
45 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
|
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
100 |
100 |
49.3 |
55 |
53.7 |
54.2 |
29.6 |
38.5 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGACTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
5.6 |
8.9 |
||||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGCCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
1.2 |
3 |
||||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
50.7 |
45 |
56.5 |
1.1 |
||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
46.3 |
2.3 |
2.4 |
|||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
45.8 |
2.5 |
1.9 |
|||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
42.1 |
|||||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
2.3 |
2.1 |
The user is advised to run SMAP effect-prediction first with the mandatory and default settings, and then decide on the most optimal parameter settings for your own design. The example data shown below are merely meant to illustrate the expected outcome of data sets processed with parameters adjusted to the specific species and reference (gene) sets. SMAP effect-prediction parameter settings are described in the section Commands & options.
Command used to run SMAP effect-prediction on a
smap effect-prediction haplotype_frequency.tsv genome.fasta borders.gff -a gene_features.gff -u guides.gff -p CAS9 -s 15 -r 20 -t 50 -e dosage -i diploid
Reference |
Locus |
Haplotypes |
target |
edit |
start |
end |
SNP |
INDEL |
Alignment |
FILTER_gRNA_INDEL |
FILTER_gRNA_SNP |
FILTER_gRNA |
Haplotype_Name |
Expected cut site |
atgCheck |
splicingSiteCheck |
stopCodonCheck |
protein_sequence |
pairwiseProteinIdentity (%) |
Effect |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
GGCTCTGTTCTTTTACTCGGCCCTGTTTGACGCTCTGGACACGACCACTCCAAGAGACAGCAACCAGAGGATGCT |
gene1 |
ref |
1790 |
1865 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1817 |
MGSSYDPYPSPGADDLFLYLSDLGPASPSAYLDLPPTPQPQPYPQSQQQQQGSKGPTQDMLLPYISSMLMEDDIDDTFFYDYPDNPALLQAQQSFLDILSDDASSPTTTTGTTNSSASVNHSSSDASASAPPTPAAVDSYSPAPAVQFDGFDLDPAAFFSNGANSDLMSSAFLKGMEEANKFLPSQDKLVIDLDPPDDTKRFVLPTRAAENLAPGFNAAATTVPAAVAMAVKEEEVILAALDAALGSGGVVLGRGRRNRLDDDEEDLELQRRSTKQSALQGDGDERDVFEKYIMTCPETCTEQMQQLRIAMQEEAAKEAAVAAGNGKAKGRRGGREVVDLRTLLVHCAQAVASDDRRSATELLRQIKQHASPQGDATQRLAHCFAEGLQARLAGTGSMVYQSLMAKRTSAADILQAYQLYMAAICFKRVVFVFSNNTIYNAALGKMKIHIVDYGIHYGFQWPCFLRWIADREGGPPEVRITGIDLPQPGFRPTQRIEETGRRLSKYAQQFGVPFKYQAIAASKMESIRAEDLNLDPEEVLIVNCLYQFKNLMDESVVIESPRDIVLNNIRKMRPHTFIHAIVNGSFSAPFFVTRFREALFFYSALFDALDTTTPRDSNQRMLIEENLFGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKQQPLNPDVVQQDIGTSNQEEICDASMS* |
NA |
FALSE |
100 |
100 |
100 |
100 |
100 |
100 |
100 |
100 |
|||
gene2 |
gene2_1 |
AGTGCTAGGTGATGCTGCGCGAGTACTGCGAGATCTAATCACTCAAGTGGAATCTCTCAGGCAGGAACAATCTGCTCTTG |
gene2 |
ref |
3751 |
3831 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
3795 |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
NA |
FALSE |
49.5 |
52.8 |
57.2 |
52.3 |
45.9 |
50.1 |
|||||
gene2 |
gene2_1 |
AGTGCTAGGTGTTGCTGCGCGAGTACTGCGAGATCTAATCACTCAAGTGGAATCTCTCAGGCAGGAGCAATCTGCTCTTG |
gene2 |
0 |
3751 |
3831 |
((3762, ‘A’, ‘T’), (3817, ‘A’, ‘G’)) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-31:S:A-T,24:S:A-G |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
100 |
FALSE |
50.5 |
47.2 |
48.2 |
47.7 |
49.9 |
|||
gene2 |
gene2_1 |
AGTGCTAGGTGATGCTGCGCGAGTACTGCGAGATCTAATCACAAGTGGAATCTCTCAGGCAGGAACAATCTGCTCTTG |
gene2 |
2 |
3751 |
3831 |
() |
((3792, ‘ACT’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:2D:ACT-A |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITSGISQAGTICSCIGAPICQFREE* |
54.8 |
FALSE |
51.8 |
45 |
||||||
gene2 |
gene2_1 |
AGTGCTAGGTGTTGCTGCGCGAGTACTGCGAGATCTAATCAAAGTGGAATCTCTCAGGCAGGAGCAATCTGCTCTTG |
gene2 |
3 |
3751 |
3831 |
((3762, ‘A’, ‘T’), (3817, ‘A’, ‘G’)) |
((3792, ‘ACTC’, ‘A’),) |
(data not shown) |
TRUE |
FALSE |
TRUE |
-1:3D:ACTC-A,-31:S:A-T,24:S:A-G |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLIKVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
99.5 |
FALSE |
55 |
42.8 |
54.1 |
|||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
ref |
3078 |
3157 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
3121 |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
NA |
FALSE |
100 |
97 |
44.3 |
48 |
4.2 |
5 |
|||||
gene3 |
gene3_1 |
CTGACGTGCTCACGTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3091, ‘T’, ‘G’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
28:S:T-G |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
3 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACATCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3148, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-29:S:G-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
5.6 |
|||||||
gene3 |
gene3_1 |
CTGACGTACTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3085, ‘G’, ‘A’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
34:S:G-A |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
4.4 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
-1 |
3078 |
3157 |
() |
((3120, ‘C’, ‘CG’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1I:C-CG |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
FALSE |
47.9 |
55.5 |
47.6 |
40.3 |
47.5 |
56 |
||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
-1 |
3078 |
3157 |
() |
((3121, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GT |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
63.1 |
FALSE |
44.5 |
7.6 |
9 |
|||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACTGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3120, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
TRUE |
TRUE |
-1:S:G-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYWVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
FALSE |
3 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
1 |
3078 |
3157 |
() |
((3120, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1D:CG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
FALSE |
24.6 |
22 |
||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGTGAAGTCTCTGTCGGACGAGCCCAGCCAGCTCT |
gene3 |
1 |
3078 |
3157 |
((3145, ‘A’, ‘C’),) |
((3120, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
FALSE |
TRUE |
-1:1D:CG-C,-26:S:A-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
FALSE |
3 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
2 |
3078 |
3157 |
() |
((3120, ‘CGG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:2D:CGG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.5 |
FALSE |
2.2 |
59.7 |
4.2 |
2 |
||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
3 |
3078 |
3157 |
() |
((3120, ‘CGGG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:3D:CGGG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
FALSE |
4.2 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
5 |
3078 |
3157 |
() |
((3120, ‘CGGGGT’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:5D:CGGGGT-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
FALSE |
1.7 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
8 |
3078 |
3157 |
() |
((3118, ‘TACGGGGTG’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:8D:TACGGGGTG-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSA* |
63.3 |
FALSE |
2.5 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
10 |
3078 |
3157 |
() |
((3121, ‘GGGGTGAAGTC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:10D:GGGGTGAAGTC-G |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVCRTSTASSCPAAAAWTRQWTTRGACCRPKPPPRSRPQATLCSAR* |
69.3 |
FALSE |
47.6 |
|||||||
gene3 |
gene3_1 |
CTGACGTTGCTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
36 |
3078 |
3157 |
() |
((3085, ‘TGCTCACTTGCTGACATACCTAGGTACTC’, ‘T’), (3116, ‘CCTACGGGG’, ‘C’)) |
(data not shown) |
TRUE |
nan |
TRUE |
34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,3:8D:CCTACGGGG-C |
3121 |
FALSE |
TRUE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLX* |
62.2 |
FALSE |
3.5 |
|||||||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
ref |
827 |
905 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
861 |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
NA |
FALSE |
100 |
98.8 |
48.3 |
64.8 |
98.4 |
98.7 |
53.6 |
41.9 |
|||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGAGAACCT |
gene4 |
-6 |
827 |
905 |
() |
((78, ‘A——’, ‘AGAACCT’),) |
(data not shown) |
FALSE |
nan |
FALSE |
-781:0I:A——-AGAACCT |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
100 |
FALSE |
1.2 |
1.6 |
1.3 |
|||||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGACTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
-1 |
827 |
905 |
() |
((861, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GA |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGL* |
13.8 |
TRUE |
1.5 |
|||||||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGTCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
-1 |
827 |
905 |
() |
((861, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GT |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCLRCQQDAGCVVEGEEALHSDAVDGAGAPGPDLQALRCECPCAVQLAPPYQKKPQSMEQPWLQLIGMGTISFRLC* |
23.6 |
TRUE |
51.7 |
35.2 |
46.4 |
55.3 |
||||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
1 |
827 |
905 |
() |
((860, ‘TG’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:1D:TG-T |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLSQVPARCRVCCRG* |
16.5 |
TRUE |
1.3 |
|||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
ref |
1190 |
1272 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1212 |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
NA |
FALSE |
100 |
100 |
38.3 |
45.4 |
43.7 |
42.8 |
4.5 |
2.2 |
|||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACACAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
-1 |
1190 |
1272 |
() |
((1212, ‘C’, ‘CA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:C-CA |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHTIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
FALSE |
1.7 |
|||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACTCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
-1 |
1190 |
1272 |
() |
((1212, ‘C’, ‘CT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:C-CT |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
FALSE |
1.2 |
3 |
||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
1 |
1190 |
1272 |
() |
((1211, ‘AC’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1D:AC-A |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHNPSCWTRYPAPRTRACSCWSSTASAA* |
53.9 |
FALSE |
2.1 |
12.3 |
18.5 |
|||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
2 |
1190 |
1272 |
() |
((1212, ‘CCA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:2D:CCA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
FALSE |
6 |
4.3 |
||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
3 |
1190 |
1272 |
() |
((1208, ‘CCCA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:3D:CCCA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
FALSE |
1.7 |
45.5 |
||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACTCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
3 |
1190 |
1272 |
() |
((1212, ‘CCAA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:3D:CCAA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
FALSE |
54.6 |
1.9 |
2.3 |
|||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
4 |
1190 |
1272 |
() |
((1212, ‘CCAAT’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:4D:CCAAT-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPSCWTRYPAPRTRACSCWSSTASAA* |
53.6 |
FALSE |
21.3 |
|||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
5 |
1190 |
1272 |
() |
((1211, ‘ACCAAT’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:5D:ACCAAT-A |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.1 |
FALSE |
1.2 |
1.2 |
||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
21 |
1190 |
1272 |
() |
((1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
1212 |
FALSE |
TRUE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPX* |
49.2 |
TRUE |
59.6 |
56.3 |
57.2 |
71.2 |
||||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
ref |
704 |
781 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
741 |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
NA |
FALSE |
100 |
96.7 |
52.6 |
100 |
50.2 |
100 |
100 |
||||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGCCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((745, ‘T’, ‘C’),) |
() |
(data not shown) |
nan |
TRUE |
TRUE |
-6:S:T-C |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPAPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
99.7 |
FALSE |
1.1 |
|||||||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCATACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((749, ‘G’, ‘A’),) |
() |
(data not shown) |
nan |
TRUE |
TRUE |
-10:S:G-A |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
100 |
FALSE |
1.1 |
|||||||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCGTACATTTTCTGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((759, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-20:S:G-T |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
100 |
FALSE |
1.1 |
3.4 |
||||||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCCGGTCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
2 |
704 |
781 |
() |
((739, ‘TCA’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
0:2D:TCA-T |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSGPVHFRWWVEGKEATGYGEGG* |
65.8 |
FALSE |
47.4 |
96.6 |
49.8 |
|||||
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGGCCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
ref |
304 |
390 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
339 |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARAVGWPPVRAYRRNALRDEARLVKVAVDGAPYLRKVDLAAHDGYAALLRALHGMFASCLVAGAGADGAGRIDTAAEYMPTYEDKDGDWMLVGDVPFKMFVDSCKRIRLMKSSEAVNLSPRTSSRQ* |
NA |
FALSE |
100 |
100 |
41.8 |
53.1 |
49.2 |
51.1 |
44 |
44.4 |
|||
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGGACCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
-1 |
304 |
390 |
() |
((339, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GA |
339 |
FALSE |
FALSE |
FALSE |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARDRGLAAGPRVPAQRAARRGQAREGGRGRRAVPAEGGPRGARRVRGPAPRAPRHVRLLPRCRSRSRRGGADRHRRRVHAHLRGQGRRLDARRRRPLQDVRGLVQEDPPHEELRGRQPISEDIIPAVIVVGVDAICPTRLISPN* |
49 |
TRUE |
58.2 |
46.9 |
50.8 |
48.9 |
1.4 |
55.6 |
||
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGCCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
1 |
304 |
390 |
() |
((336, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1D:CG-C |
339 |
FALSE |
FALSE |
FALSE |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARPWAGRRSARTGATRCATRPGS* |
43.4 |
TRUE |
54.6 |
|||||||
gene8 |
gene8_1 |
GCTGAATATTTTTTTCTCTTTGGTTTGTTGCTGTTGTTGTTGTTGGCTGATGCAGGGCTTCAGGAAGATAGTGGCGGACAGGTGGGA |
gene8 |
ref |
1767 |
1854 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1825 |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQPLPTPMPPHQPYHHHLHHLHHHLSPFSPPPLAQPVPSYHHHHFQEEPIATATAPHGGAQAGAAGGGNNEGSGAGSRRGLSGRANHVAPVTSPSSAAHASLPSAAGGGAAASSCRLMELDPADSPSPPRRPEADDGTDTVKLFGVALQGKKKKRAHQEDGDDGNHEQGSSDV* |
NA |
FALSE |
100 |
98.4 |
55 |
65.5 |
54.6 |
52.5 |
63.6 |
51.5 |
|||
gene8 |
gene8_1 |
GCTGAATATTTTTTTCTCTTTGGTTTGTTGCTGTTGTTGTTGTTGGCTGATGCAGGGCTTTCAGGAAGATAGTGGCGGACAGGTGGGA |
gene8 |
-1 |
1767 |
1854 |
() |
((1825, ‘C’, ‘CT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:C-CT |
1825 |
FALSE |
FALSE |
FALSE |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFQEDSGGQVGVRQRVLQEGRQAPTRRDPPEEVVAAAADADAAAPALPPPPPPSPPPPQPVLPAAAGTAGAVVPPPPLPRRAHRHRHRAARRCSSRRRRWRQQ* |
39.1 |
TRUE |
1.6 |
45 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
|
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
ref |
315 |
402 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
339 |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
NA |
FALSE |
100 |
100 |
49.3 |
55 |
53.7 |
54.2 |
29.6 |
38.5 |
|||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGACTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GA |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVTGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
5.6 |
8.9 |
||||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGCCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GC’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GC |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVPGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
1.2 |
3 |
||||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GT |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVSGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
50.7 |
45 |
56.5 |
1.1 |
||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
1 |
315 |
402 |
() |
((339, ‘GC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1D:GC-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVWPSPRASSWAGPRPRPSRWRAPSR* |
34 |
TRUE |
46.3 |
2.3 |
2.4 |
|||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
2 |
315 |
402 |
() |
((339, ‘GCT’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:2D:GCT-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
45.8 |
2.5 |
1.9 |
|||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
2 |
315 |
402 |
() |
((339, ‘GC’, ‘G’), (341, ‘TG’, ‘T’)) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1D:GC-G,-4:1D:TG-T |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVCHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
42.1 |
|||||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
3 |
315 |
402 |
() |
((337, ‘GTGC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
0:3D:GTGC-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
99.7 |
FALSE |
2.3 |
2.1 |
Haplotype |
Reference |
Locus |
target |
Expected cut site |
FILTER_gRNA |
atgCheck |
splicingSiteCheck |
protein_sequence |
pairwiseProteinIdentity (%) |
Effect |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1_1_ref |
gene1 |
gene1_1 |
gene1 |
1817 |
False |
MGSSYDPYPSPGADDLFLYLSDLGPASPSAYLDLPPTPQPQPYPQSQQQQQGSKGPTQDMLLPYISSMLMEDDIDDTFFYDYPDNPALLQAQQSFLDILSDDASSPTTTTGTTNSSASVNHSSSDASASAPPTPAAVDSYSPAPAVQFDGFDLDPAAFFSNGANSDLMSSAFLKGMEEANKFLPSQDKLVIDLDPPDDTKRFVLPTRAAENLAPGFNAAATTVPAAVAMAVKEEEVILAALDAALGSGGVVLGRGRRNRLDDDEEDLELQRRSTKQSALQGDGDERDVFEKYIMTCPETCTEQMQQLRIAMQEEAAKEAAVAAGNGKAKGRRGGREVVDLRTLLVHCAQAVASDDRRSATELLRQIKQHASPQGDATQRLAHCFAEGLQARLAGTGSMVYQSLMAKRTSAADILQAYQLYMAAICFKRVVFVFSNNTIYNAALGKMKIHIVDYGIHYGFQWPCFLRWIADREGGPPEVRITGIDLPQPGFRPTQRIEETGRRLSKYAQQFGVPFKYQAIAASKMESIRAEDLNLDPEEVLIVNCLYQFKNLMDESVVIESPRDIVLNNIRKMRPHTFIHAIVNGSFSAPFFVTRFREALFFYSALFDALDTTTPRDSNQRMLIEENLFGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKQQPLNPDVVQQDIGTSNQEEICDASMS* |
NA |
False |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
||
gene2_1_ref |
gene2 |
gene2_1 |
gene2 |
3795 |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
NA |
False |
100.0 |
100.0 |
48.2 |
NA |
57.2 |
100.0 |
45.9 |
100.0 |
||
gene2_1_-1:2D:ACT-A |
gene2 |
gene2_1 |
gene2 |
3795 |
True |
False |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITSGISQAGTICSCIGAPICQFREE* |
54.8 |
False |
NA |
NA |
51.8 |
45.0 |
NA |
NA |
NA |
NA |
gene2_1_-1:3D:ACTC-A |
gene2 |
gene2_1 |
gene2 |
3795 |
True |
False |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLIKVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
99.5 |
False |
NA |
NA |
NA |
55.0 |
42.8 |
NA |
54.1 |
NA |
gene3_1_ref |
gene3 |
gene3_1 |
gene3 |
3121 |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
NA |
False |
100.0 |
100.0 |
49.9 |
NA |
52.4 |
NA |
4.2 |
5.0 |
||
gene3_1_-1:1D:CG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
24.6 |
25.0 |
gene3_1_-1:1I:C-CG |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
False |
NA |
NA |
47.9 |
55.5 |
47.6 |
40.3 |
47.5 |
56.0 |
gene3_1_-1:2D:CGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.5 |
False |
NA |
NA |
2.2 |
NA |
NA |
59.7 |
4.2 |
2.0 |
gene3_1_-1:3D:CGGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
4.2 |
NA |
gene3_1_-1:5D:CGGGGT-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
NA |
gene3_1_-1:S:G-T |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYWVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
3.0 |
gene3_1_-2:10D:GGGGTGAAGTC-G |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVCRTSTASSCPAAAAWTRQWTTRGACCRPKPPPRSRPQATLCSAR* |
69.3 |
False |
NA |
NA |
NA |
NA |
47.6 |
NA |
NA |
NA |
gene3_1_-2:1I:G-GT |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
63.1 |
False |
NA |
NA |
NA |
44.5 |
NA |
NA |
7.6 |
9.0 |
gene3_1_1:8D:TACGGGGTG-T |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSA* |
63.3 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
2.5 |
NA |
gene3_1_34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,3:8D:CCTACGGGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
True |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLX* |
62.2 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
3.5 |
NA |
gene4_1_ref |
gene4 |
gene4_1 |
gene4 |
861 |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
NA |
False |
100.0 |
100.0 |
48.3 |
64.8 |
100.0 |
100.0 |
53.6 |
41.9 |
||
gene4_1_1:1D:TG-T |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLSQVPARCRVCCRG* |
16.5 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.3 |
gene4_1_2:1I:G-GA |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGL* |
13.8 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.5 |
gene4_1_2:1I:G-GT |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCLRCQQDAGCVVEGEEALHSDAVDGAGAPGPDLQALRCECPCAVQLAPPYQKKPQSMEQPWLQLIGMGTISFRLC* |
23.6 |
True |
NA |
NA |
51.7 |
35.2 |
NA |
NA |
46.4 |
55.3 |
gene5_1_ref |
gene5 |
gene5_1 |
gene5 |
1212 |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
NA |
False |
100.0 |
100.0 |
38.3 |
45.4 |
43.7 |
42.8 |
4.5 |
2.2 |
||
gene5_1_-1:1D:AC-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHNPSCWTRYPAPRTRACSCWSSTASAA* |
53.9 |
False |
NA |
NA |
2.1 |
NA |
NA |
NA |
12.3 |
18.5 |
gene5_1_-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
True |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPX* |
49.2 |
True |
NA |
NA |
59.6 |
NA |
56.3 |
57.2 |
71.2 |
NA |
gene5_1_-1:5D:ACCAAT-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.1 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
1.2 |
gene5_1_-2:1I:C-CA |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHTIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
gene5_1_-2:1I:C-CT |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3.0 |
gene5_1_-2:2D:CCA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
6.0 |
4.3 |
gene5_1_-2:3D:CCAA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
False |
NA |
NA |
NA |
54.6 |
NA |
NA |
1.9 |
2.3 |
gene5_1_-2:4D:CCAAT-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPSCWTRYPAPRTRACSCWSSTASAA* |
53.6 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
21.3 |
gene5_1_2:3D:CCCA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
45.5 |
gene6_1_ref |
gene6 |
gene6_1 |
gene6 |
741 |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
NA |
False |
100.0 |
97.8 |
52.6 |
3.4 |
100.0 |
50.2 |
100.0 |
100.0 |
||
gene6_1_-10:S:G-A |
gene6 |
gene6_1 |
gene6 |
741 |
True |
False |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
100.0 |
False |
NA |
1.1 |
NA |
NA |
NA |
NA |
NA |
NA |
gene6_1_-6:S:T-C |
gene6 |
gene6_1 |
gene6 |
741 |
True |
False |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPAPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
99.7 |
False |
NA |
1.1 |
NA |
NA |
NA |
NA |
NA |
NA |
gene6_1_0:2D:TCA-T |
gene6 |
gene6_1 |
gene6 |
741 |
True |
False |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSGPVHFRWWVEGKEATGYGEGG* |
65.8 |
False |
NA |
NA |
47.4 |
96.6 |
NA |
49.8 |
NA |
NA |
gene7_1_ref |
gene7 |
gene7_1 |
gene7 |
339 |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARAVGWPPVRAYRRNALRDEARLVKVAVDGAPYLRKVDLAAHDGYAALLRALHGMFASCLVAGAGADGAGRIDTAAEYMPTYEDKDGDWMLVGDVPFKMFVDSCKRIRLMKSSEAVNLSPRTSSRQ* |
NA |
False |
100.0 |
100.0 |
41.8 |
53.1 |
49.2 |
51.1 |
44.0 |
44.4 |
||
gene7_1_-1:1D:CG-C |
gene7 |
gene7_1 |
gene7 |
339 |
True |
False |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARPWAGRRSARTGATRCATRPGS* |
43.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
54.6 |
NA |
gene7_1_2:1I:G-GA |
gene7 |
gene7_1 |
gene7 |
339 |
True |
False |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARDRGLAAGPRVPAQRAARRGQAREGGRGRRAVPAEGGPRGARRVRGPAPRAPRHVRLLPRCRSRSRRGGADRHRRRVHAHLRGQGRRLDARRRRPLQDVRGLVQEDPPHEELRGRQPISEDIIPAVIVVGVDAICPTRLISPN* |
49.0 |
True |
NA |
NA |
58.2 |
46.9 |
50.8 |
48.9 |
1.4 |
55.6 |
gene8_1_ref |
gene8 |
gene8_1 |
gene8 |
1825 |
False |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQPLPTPMPPHQPYHHHLHHLHHHLSPFSPPPLAQPVPSYHHHHFQEEPIATATAPHGGAQAGAAGGGNNEGSGAGSRRGLSGRANHVAPVTSPSSAAHASLPSAAGGGAAASSCRLMELDPADSPSPPRRPEADDGTDTVKLFGVALQGKKKKRAHQEDGDDGNHEQGSSDV* |
NA |
False |
100.0 |
98.4 |
55.0 |
65.5 |
54.6 |
52.5 |
63.6 |
51.5 |
||
gene8_1_2:1I:C-CT |
gene8 |
gene8_1 |
gene8 |
1825 |
True |
False |
False |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFQEDSGGQVGVRQRVLQEGRQAPTRRDPPEEVVAAAADADAAAPALPPPPPPSPPPPQPVLPAAAGTAGAVVPPPPLPRRAHRHRHRAARRCSSRRRRWRQQ* |
39.1 |
True |
NA |
1.6 |
45.0 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9_1_ref |
gene9 |
gene9_1 |
gene9 |
339 |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
NA |
False |
100.0 |
100.0 |
49.3 |
55.0 |
53.7 |
54.2 |
29.6 |
38.5 |
||
gene9_1_-2:1D:GC-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVWPSPRASSWAGPRPRPSRWRAPSR* |
34.0 |
True |
NA |
NA |
NA |
NA |
46.3 |
NA |
2.3 |
2.4 |
gene9_1_-2:1D:GC-G,-4:1D:TG-T |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVCHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
42.1 |
gene9_1_-2:1I:G-GA |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVTGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
5.6 |
8.9 |
gene9_1_-2:1I:G-GC |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVPGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3.0 |
gene9_1_-2:1I:G-GT |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVSGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
50.7 |
45.0 |
NA |
NA |
56.5 |
1.1 |
gene9_1_-2:2D:GCT-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
45.8 |
2.5 |
1.9 |
gene9_1_0:3D:GTGC-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
2.3 |
2.1 |
Reference |
Locus |
SNP |
INDEL |
Haplotype_Name |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
() |
() |
nan |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene2 |
gene2_1 |
() |
() |
nan |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene3 |
gene3_1 |
() |
() |
nan |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene4 |
gene4_1 |
nan |
(861, ‘G’, ‘GA’),(861, ‘G’, ‘GT’),(860, ‘TG’, ‘T’) |
2:1I:G-GA,2:1I:G-GT,1:1D:TG-T |
0.0 |
0.0 |
51.7 |
35.2 |
0.0 |
0.0 |
46.4 |
58.099999999999994 |
gene5 |
gene5_1 |
nan |
(1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’) |
-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
0.0 |
0.0 |
59.6 |
0.0 |
56.3 |
57.2 |
71.2 |
0.0 |
gene6 |
gene6_1 |
() |
() |
nan |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene7 |
gene7_1 |
nan |
(339, ‘G’, ‘GA’),(336, ‘CG’, ‘C’) |
2:1I:G-GA,-1:1D:CG-C |
0.0 |
0.0 |
58.2 |
46.9 |
50.8 |
48.9 |
56.0 |
55.6 |
gene8 |
gene8_1 |
nan |
(1825, ‘C’, ‘CT’) |
2:1I:C-CT |
0.0 |
1.6 |
45.0 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9 |
gene9_1 |
nan |
(339, ‘G’, ‘GA’),(339, ‘G’, ‘GC’),(339, ‘G’, ‘GT’),(339, ‘GC’, ‘G’),(339, ‘GCT’, ‘G’),(339, ‘GC’, ‘G’),(341, ‘TG’, ‘T’) |
-2:1I:G-GA,-2:1I:G-GC,-2:1I:G-GT,-2:1D:GC-G,-2:2D:GCT-G,-2:1D:GC-G,-4:1D:TG-T |
0.0 |
0.0 |
50.7 |
45.0 |
46.3 |
45.8 |
68.1 |
59.400000000000006 |
Reference |
Locus |
SNP |
INDEL |
Haplotype_Name |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
() |
() |
nan |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
gene2 |
gene2_1 |
() |
() |
nan |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
gene3 |
gene3_1 |
() |
() |
nan |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
gene4 |
gene4_1 |
nan |
(861, ‘G’, ‘GA’),(861, ‘G’, ‘GT’),(860, ‘TG’, ‘T’) |
2:1I:G-GA,2:1I:G-GT,1:1D:TG-T |
0 |
0 |
1 |
1 |
0 |
0 |
1 |
1 |
gene5 |
gene5_1 |
nan |
(1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’) |
-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
0 |
0 |
1 |
0 |
1 |
1 |
1 |
0 |
gene6 |
gene6_1 |
() |
() |
nan |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
gene7 |
gene7_1 |
nan |
(339, ‘G’, ‘GA’),(336, ‘CG’, ‘C’) |
2:1I:G-GA,-1:1D:CG-C |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
gene8 |
gene8_1 |
nan |
(1825, ‘C’, ‘CT’) |
2:1I:C-CT |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
gene9 |
gene9_1 |
nan |
(339, ‘G’, ‘GA’),(339, ‘G’, ‘GC’),(339, ‘G’, ‘GT’),(339, ‘GC’, ‘G’),(339, ‘GCT’, ‘G’),(339, ‘GC’, ‘G’),(341, ‘TG’, ‘T’) |
-2:1I:G-GA,-2:1I:G-GC,-2:1I:G-GT,-2:1D:GC-G,-2:2D:GCT-G,-2:1D:GC-G,-4:1D:TG-T |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
Command used to run SMAP effect-prediction on a
smap effect-prediction haplotype_frequency.tsv genome.fasta borders.gff -a gene_features.gff -u guides.gff -p CAS9 -s 15 -r 20 -t 70 -e dosage -i diploid
Reference |
Locus |
Haplotypes |
target |
edit |
start |
end |
SNP |
INDEL |
Alignment |
FILTER_gRNA_INDEL |
FILTER_gRNA_SNP |
FILTER_gRNA |
Haplotype_Name |
Expected cut site |
atgCheck |
splicingSiteCheck |
stopCodonCheck |
protein_sequence |
pairwiseProteinIdentity (%) |
Effect |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
GGCTCTGTTCTTTTACTCGGCCCTGTTTGACGCTCTGGACACGACCACTCCAAGAGACAGCAACCAGAGGATGCT |
gene1 |
ref |
1790 |
1865 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1817 |
MGSSYDPYPSPGADDLFLYLSDLGPASPSAYLDLPPTPQPQPYPQSQQQQQGSKGPTQDMLLPYISSMLMEDDIDDTFFYDYPDNPALLQAQQSFLDILSDDASSPTTTTGTTNSSASVNHSSSDASASAPPTPAAVDSYSPAPAVQFDGFDLDPAAFFSNGANSDLMSSAFLKGMEEANKFLPSQDKLVIDLDPPDDTKRFVLPTRAAENLAPGFNAAATTVPAAVAMAVKEEEVILAALDAALGSGGVVLGRGRRNRLDDDEEDLELQRRSTKQSALQGDGDERDVFEKYIMTCPETCTEQMQQLRIAMQEEAAKEAAVAAGNGKAKGRRGGREVVDLRTLLVHCAQAVASDDRRSATELLRQIKQHASPQGDATQRLAHCFAEGLQARLAGTGSMVYQSLMAKRTSAADILQAYQLYMAAICFKRVVFVFSNNTIYNAALGKMKIHIVDYGIHYGFQWPCFLRWIADREGGPPEVRITGIDLPQPGFRPTQRIEETGRRLSKYAQQFGVPFKYQAIAASKMESIRAEDLNLDPEEVLIVNCLYQFKNLMDESVVIESPRDIVLNNIRKMRPHTFIHAIVNGSFSAPFFVTRFREALFFYSALFDALDTTTPRDSNQRMLIEENLFGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKQQPLNPDVVQQDIGTSNQEEICDASMS* |
NA |
FALSE |
100 |
100 |
100 |
100 |
100 |
100 |
100 |
100 |
|||
gene2 |
gene2_1 |
AGTGCTAGGTGATGCTGCGCGAGTACTGCGAGATCTAATCACTCAAGTGGAATCTCTCAGGCAGGAACAATCTGCTCTTG |
gene2 |
ref |
3751 |
3831 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
3795 |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
NA |
FALSE |
49.5 |
52.8 |
57.2 |
52.3 |
45.9 |
50.1 |
|||||
gene2 |
gene2_1 |
AGTGCTAGGTGTTGCTGCGCGAGTACTGCGAGATCTAATCACTCAAGTGGAATCTCTCAGGCAGGAGCAATCTGCTCTTG |
gene2 |
0 |
3751 |
3831 |
((3762, ‘A’, ‘T’), (3817, ‘A’, ‘G’)) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-31:S:A-T,24:S:A-G |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
100 |
FALSE |
50.5 |
47.2 |
48.2 |
47.7 |
49.9 |
|||
gene2 |
gene2_1 |
AGTGCTAGGTGATGCTGCGCGAGTACTGCGAGATCTAATCACAAGTGGAATCTCTCAGGCAGGAACAATCTGCTCTTG |
gene2 |
2 |
3751 |
3831 |
() |
((3792, ‘ACT’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:2D:ACT-A |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITSGISQAGTICSCIGAPICQFREE* |
54.8 |
TRUE |
51.8 |
45 |
||||||
gene2 |
gene2_1 |
AGTGCTAGGTGTTGCTGCGCGAGTACTGCGAGATCTAATCAAAGTGGAATCTCTCAGGCAGGAGCAATCTGCTCTTG |
gene2 |
3 |
3751 |
3831 |
((3762, ‘A’, ‘T’), (3817, ‘A’, ‘G’)) |
((3792, ‘ACTC’, ‘A’),) |
(data not shown) |
TRUE |
FALSE |
TRUE |
-1:3D:ACTC-A,-31:S:A-T,24:S:A-G |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLIKVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
99.5 |
FALSE |
55 |
42.8 |
54.1 |
|||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
ref |
3078 |
3157 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
3121 |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
NA |
FALSE |
100 |
97 |
44.3 |
48 |
4.2 |
5 |
|||||
gene3 |
gene3_1 |
CTGACGTGCTCACGTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3091, ‘T’, ‘G’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
28:S:T-G |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
3 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACATCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3148, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-29:S:G-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
5.6 |
|||||||
gene3 |
gene3_1 |
CTGACGTACTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3085, ‘G’, ‘A’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
34:S:G-A |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
4.4 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
-1 |
3078 |
3157 |
() |
((3120, ‘C’, ‘CG’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1I:C-CG |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
TRUE |
47.9 |
55.5 |
47.6 |
40.3 |
47.5 |
56 |
||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
-1 |
3078 |
3157 |
() |
((3121, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GT |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
63.1 |
TRUE |
44.5 |
7.6 |
9 |
|||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACTGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3120, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
TRUE |
TRUE |
-1:S:G-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYWVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
FALSE |
3 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
1 |
3078 |
3157 |
() |
((3120, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1D:CG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
TRUE |
24.6 |
22 |
||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGTGAAGTCTCTGTCGGACGAGCCCAGCCAGCTCT |
gene3 |
1 |
3078 |
3157 |
((3145, ‘A’, ‘C’),) |
((3120, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
FALSE |
TRUE |
-1:1D:CG-C,-26:S:A-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
TRUE |
3 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
2 |
3078 |
3157 |
() |
((3120, ‘CGG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:2D:CGG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.5 |
TRUE |
2.2 |
59.7 |
4.2 |
2 |
||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
3 |
3078 |
3157 |
() |
((3120, ‘CGGG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:3D:CGGG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
FALSE |
4.2 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
5 |
3078 |
3157 |
() |
((3120, ‘CGGGGT’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:5D:CGGGGT-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
TRUE |
1.7 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
8 |
3078 |
3157 |
() |
((3118, ‘TACGGGGTG’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:8D:TACGGGGTG-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSA* |
63.3 |
TRUE |
2.5 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
10 |
3078 |
3157 |
() |
((3121, ‘GGGGTGAAGTC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:10D:GGGGTGAAGTC-G |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVCRTSTASSCPAAAAWTRQWTTRGACCRPKPPPRSRPQATLCSAR* |
69.3 |
TRUE |
47.6 |
|||||||
gene3 |
gene3_1 |
CTGACGTTGCTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
36 |
3078 |
3157 |
() |
((3085, ‘TGCTCACTTGCTGACATACCTAGGTACTC’, ‘T’), (3116, ‘CCTACGGGG’, ‘C’)) |
(data not shown) |
TRUE |
nan |
TRUE |
34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,3:8D:CCTACGGGG-C |
3121 |
FALSE |
TRUE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLX* |
62.2 |
TRUE |
3.5 |
|||||||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
ref |
827 |
905 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
861 |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
NA |
FALSE |
100 |
98.8 |
48.3 |
64.8 |
98.4 |
98.7 |
53.6 |
41.9 |
|||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGAGAACCT |
gene4 |
-6 |
827 |
905 |
() |
((78, ‘A——’, ‘AGAACCT’),) |
(data not shown) |
FALSE |
nan |
FALSE |
-781:0I:A——-AGAACCT |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
100 |
FALSE |
1.2 |
1.6 |
1.3 |
|||||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGACTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
-1 |
827 |
905 |
() |
((861, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GA |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGL* |
13.8 |
TRUE |
1.5 |
|||||||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGTCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
-1 |
827 |
905 |
() |
((861, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GT |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCLRCQQDAGCVVEGEEALHSDAVDGAGAPGPDLQALRCECPCAVQLAPPYQKKPQSMEQPWLQLIGMGTISFRLC* |
23.6 |
TRUE |
51.7 |
35.2 |
46.4 |
55.3 |
||||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
1 |
827 |
905 |
() |
((860, ‘TG’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:1D:TG-T |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLSQVPARCRVCCRG* |
16.5 |
TRUE |
1.3 |
|||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
ref |
1190 |
1272 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1212 |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
NA |
FALSE |
100 |
100 |
38.3 |
45.4 |
43.7 |
42.8 |
4.5 |
2.2 |
|||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACACAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
-1 |
1190 |
1272 |
() |
((1212, ‘C’, ‘CA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:C-CA |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHTIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
TRUE |
1.7 |
|||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACTCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
-1 |
1190 |
1272 |
() |
((1212, ‘C’, ‘CT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:C-CT |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
TRUE |
1.2 |
3 |
||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
1 |
1190 |
1272 |
() |
((1211, ‘AC’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1D:AC-A |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHNPSCWTRYPAPRTRACSCWSSTASAA* |
53.9 |
TRUE |
2.1 |
12.3 |
18.5 |
|||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
2 |
1190 |
1272 |
() |
((1212, ‘CCA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:2D:CCA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
TRUE |
6 |
4.3 |
||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
3 |
1190 |
1272 |
() |
((1208, ‘CCCA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:3D:CCCA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
FALSE |
1.7 |
45.5 |
||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACTCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
3 |
1190 |
1272 |
() |
((1212, ‘CCAA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:3D:CCAA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
FALSE |
54.6 |
1.9 |
2.3 |
|||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
4 |
1190 |
1272 |
() |
((1212, ‘CCAAT’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:4D:CCAAT-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPSCWTRYPAPRTRACSCWSSTASAA* |
53.6 |
TRUE |
21.3 |
|||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
5 |
1190 |
1272 |
() |
((1211, ‘ACCAAT’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:5D:ACCAAT-A |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.1 |
TRUE |
1.2 |
1.2 |
||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
21 |
1190 |
1272 |
() |
((1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
1212 |
FALSE |
TRUE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPX* |
49.2 |
TRUE |
59.6 |
56.3 |
57.2 |
71.2 |
||||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
ref |
704 |
781 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
741 |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
NA |
FALSE |
100 |
96.7 |
52.6 |
100 |
50.2 |
100 |
100 |
||||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGCCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((745, ‘T’, ‘C’),) |
() |
(data not shown) |
nan |
TRUE |
TRUE |
-6:S:T-C |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPAPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
99.7 |
FALSE |
1.1 |
|||||||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCATACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((749, ‘G’, ‘A’),) |
() |
(data not shown) |
nan |
TRUE |
TRUE |
-10:S:G-A |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
100 |
FALSE |
1.1 |
|||||||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCGTACATTTTCTGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((759, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-20:S:G-T |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
100 |
FALSE |
1.1 |
3.4 |
||||||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCCGGTCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
2 |
704 |
781 |
() |
((739, ‘TCA’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
0:2D:TCA-T |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSGPVHFRWWVEGKEATGYGEGG* |
65.8 |
TRUE |
47.4 |
96.6 |
49.8 |
|||||
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGGCCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
ref |
304 |
390 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
339 |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARAVGWPPVRAYRRNALRDEARLVKVAVDGAPYLRKVDLAAHDGYAALLRALHGMFASCLVAGAGADGAGRIDTAAEYMPTYEDKDGDWMLVGDVPFKMFVDSCKRIRLMKSSEAVNLSPRTSSRQ* |
NA |
FALSE |
100 |
100 |
41.8 |
53.1 |
49.2 |
51.1 |
44 |
44.4 |
|||
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGGACCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
-1 |
304 |
390 |
() |
((339, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GA |
339 |
FALSE |
FALSE |
FALSE |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARDRGLAAGPRVPAQRAARRGQAREGGRGRRAVPAEGGPRGARRVRGPAPRAPRHVRLLPRCRSRSRRGGADRHRRRVHAHLRGQGRRLDARRRRPLQDVRGLVQEDPPHEELRGRQPISEDIIPAVIVVGVDAICPTRLISPN* |
49 |
TRUE |
58.2 |
46.9 |
50.8 |
48.9 |
1.4 |
55.6 |
||
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGCCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
1 |
304 |
390 |
() |
((336, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1D:CG-C |
339 |
FALSE |
FALSE |
FALSE |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARPWAGRRSARTGATRCATRPGS* |
43.4 |
TRUE |
54.6 |
|||||||
gene8 |
gene8_1 |
GCTGAATATTTTTTTCTCTTTGGTTTGTTGCTGTTGTTGTTGTTGGCTGATGCAGGGCTTCAGGAAGATAGTGGCGGACAGGTGGGA |
gene8 |
ref |
1767 |
1854 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1825 |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQPLPTPMPPHQPYHHHLHHLHHHLSPFSPPPLAQPVPSYHHHHFQEEPIATATAPHGGAQAGAAGGGNNEGSGAGSRRGLSGRANHVAPVTSPSSAAHASLPSAAGGGAAASSCRLMELDPADSPSPPRRPEADDGTDTVKLFGVALQGKKKKRAHQEDGDDGNHEQGSSDV* |
NA |
FALSE |
100 |
98.4 |
55 |
65.5 |
54.6 |
52.5 |
63.6 |
51.5 |
|||
gene8 |
gene8_1 |
GCTGAATATTTTTTTCTCTTTGGTTTGTTGCTGTTGTTGTTGTTGGCTGATGCAGGGCTTTCAGGAAGATAGTGGCGGACAGGTGGGA |
gene8 |
-1 |
1767 |
1854 |
() |
((1825, ‘C’, ‘CT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:C-CT |
1825 |
FALSE |
FALSE |
FALSE |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFQEDSGGQVGVRQRVLQEGRQAPTRRDPPEEVVAAAADADAAAPALPPPPPPSPPPPQPVLPAAAGTAGAVVPPPPLPRRAHRHRHRAARRCSSRRRRWRQQ* |
39.1 |
TRUE |
1.6 |
45 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
|
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
ref |
315 |
402 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
339 |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
NA |
FALSE |
100 |
100 |
49.3 |
55 |
53.7 |
54.2 |
29.6 |
38.5 |
|||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGACTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GA |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVTGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
5.6 |
8.9 |
||||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGCCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GC’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GC |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVPGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
1.2 |
3 |
||||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GT |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVSGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
50.7 |
45 |
56.5 |
1.1 |
||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
1 |
315 |
402 |
() |
((339, ‘GC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1D:GC-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVWPSPRASSWAGPRPRPSRWRAPSR* |
34 |
TRUE |
46.3 |
2.3 |
2.4 |
|||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
2 |
315 |
402 |
() |
((339, ‘GCT’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:2D:GCT-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
45.8 |
2.5 |
1.9 |
|||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
2 |
315 |
402 |
() |
((339, ‘GC’, ‘G’), (341, ‘TG’, ‘T’)) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1D:GC-G,-4:1D:TG-T |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVCHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
42.1 |
|||||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
3 |
315 |
402 |
() |
((337, ‘GTGC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
0:3D:GTGC-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
99.7 |
FALSE |
2.3 |
2.1 |
Haplotype |
Reference |
Locus |
target |
Expected cut site |
FILTER_gRNA |
atgCheck |
splicingSiteCheck |
protein_sequence |
pairwiseProteinIdentity (%) |
Effect |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1_1_ref |
gene1 |
gene1_1 |
gene1 |
1817 |
False |
MGSSYDPYPSPGADDLFLYLSDLGPASPSAYLDLPPTPQPQPYPQSQQQQQGSKGPTQDMLLPYISSMLMEDDIDDTFFYDYPDNPALLQAQQSFLDILSDDASSPTTTTGTTNSSASVNHSSSDASASAPPTPAAVDSYSPAPAVQFDGFDLDPAAFFSNGANSDLMSSAFLKGMEEANKFLPSQDKLVIDLDPPDDTKRFVLPTRAAENLAPGFNAAATTVPAAVAMAVKEEEVILAALDAALGSGGVVLGRGRRNRLDDDEEDLELQRRSTKQSALQGDGDERDVFEKYIMTCPETCTEQMQQLRIAMQEEAAKEAAVAAGNGKAKGRRGGREVVDLRTLLVHCAQAVASDDRRSATELLRQIKQHASPQGDATQRLAHCFAEGLQARLAGTGSMVYQSLMAKRTSAADILQAYQLYMAAICFKRVVFVFSNNTIYNAALGKMKIHIVDYGIHYGFQWPCFLRWIADREGGPPEVRITGIDLPQPGFRPTQRIEETGRRLSKYAQQFGVPFKYQAIAASKMESIRAEDLNLDPEEVLIVNCLYQFKNLMDESVVIESPRDIVLNNIRKMRPHTFIHAIVNGSFSAPFFVTRFREALFFYSALFDALDTTTPRDSNQRMLIEENLFGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKQQPLNPDVVQQDIGTSNQEEICDASMS* |
NA |
False |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
||
gene2_1_ref |
gene2 |
gene2_1 |
gene2 |
3795 |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
NA |
False |
100.0 |
100.0 |
48.2 |
NA |
57.2 |
100.0 |
45.9 |
100.0 |
||
gene2_1_-1:2D:ACT-A |
gene2 |
gene2_1 |
gene2 |
3795 |
True |
False |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITSGISQAGTICSCIGAPICQFREE* |
54.8 |
True |
NA |
NA |
51.8 |
45.0 |
NA |
NA |
NA |
NA |
gene2_1_-1:3D:ACTC-A |
gene2 |
gene2_1 |
gene2 |
3795 |
True |
False |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLIKVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
99.5 |
False |
NA |
NA |
NA |
55.0 |
42.8 |
NA |
54.1 |
NA |
gene3_1_ref |
gene3 |
gene3_1 |
gene3 |
3121 |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
NA |
False |
100.0 |
100.0 |
49.9 |
NA |
52.4 |
NA |
4.2 |
5.0 |
||
gene3_1_-1:1D:CG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
24.6 |
25.0 |
gene3_1_-1:1I:C-CG |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
True |
NA |
NA |
47.9 |
55.5 |
47.6 |
40.3 |
47.5 |
56.0 |
gene3_1_-1:2D:CGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.5 |
True |
NA |
NA |
2.2 |
NA |
NA |
59.7 |
4.2 |
2.0 |
gene3_1_-1:3D:CGGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
4.2 |
NA |
gene3_1_-1:5D:CGGGGT-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
NA |
gene3_1_-1:S:G-T |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYWVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
3.0 |
gene3_1_-2:10D:GGGGTGAAGTC-G |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVCRTSTASSCPAAAAWTRQWTTRGACCRPKPPPRSRPQATLCSAR* |
69.3 |
True |
NA |
NA |
NA |
NA |
47.6 |
NA |
NA |
NA |
gene3_1_-2:1I:G-GT |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
63.1 |
True |
NA |
NA |
NA |
44.5 |
NA |
NA |
7.6 |
9.0 |
gene3_1_1:8D:TACGGGGTG-T |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSA* |
63.3 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
2.5 |
NA |
gene3_1_34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,3:8D:CCTACGGGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
True |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLX* |
62.2 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
3.5 |
NA |
gene4_1_ref |
gene4 |
gene4_1 |
gene4 |
861 |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
NA |
False |
100.0 |
100.0 |
48.3 |
64.8 |
100.0 |
100.0 |
53.6 |
41.9 |
||
gene4_1_1:1D:TG-T |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLSQVPARCRVCCRG* |
16.5 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.3 |
gene4_1_2:1I:G-GA |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGL* |
13.8 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.5 |
gene4_1_2:1I:G-GT |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCLRCQQDAGCVVEGEEALHSDAVDGAGAPGPDLQALRCECPCAVQLAPPYQKKPQSMEQPWLQLIGMGTISFRLC* |
23.6 |
True |
NA |
NA |
51.7 |
35.2 |
NA |
NA |
46.4 |
55.3 |
gene5_1_ref |
gene5 |
gene5_1 |
gene5 |
1212 |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
NA |
False |
100.0 |
100.0 |
38.3 |
45.4 |
43.7 |
42.8 |
4.5 |
2.2 |
||
gene5_1_-1:1D:AC-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHNPSCWTRYPAPRTRACSCWSSTASAA* |
53.9 |
True |
NA |
NA |
2.1 |
NA |
NA |
NA |
12.3 |
18.5 |
gene5_1_-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
True |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPX* |
49.2 |
True |
NA |
NA |
59.6 |
NA |
56.3 |
57.2 |
71.2 |
NA |
gene5_1_-1:5D:ACCAAT-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.1 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
1.2 |
gene5_1_-2:1I:C-CA |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHTIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
gene5_1_-2:1I:C-CT |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3.0 |
gene5_1_-2:2D:CCA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
6.0 |
4.3 |
gene5_1_-2:3D:CCAA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
False |
NA |
NA |
NA |
54.6 |
NA |
NA |
1.9 |
2.3 |
gene5_1_-2:4D:CCAAT-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPSCWTRYPAPRTRACSCWSSTASAA* |
53.6 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
21.3 |
gene5_1_2:3D:CCCA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
45.5 |
gene6_1_ref |
gene6 |
gene6_1 |
gene6 |
741 |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
NA |
False |
100.0 |
97.8 |
52.6 |
3.4 |
100.0 |
50.2 |
100.0 |
100.0 |
||
gene6_1_-10:S:G-A |
gene6 |
gene6_1 |
gene6 |
741 |
True |
False |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
100.0 |
False |
NA |
1.1 |
NA |
NA |
NA |
NA |
NA |
NA |
gene6_1_-6:S:T-C |
gene6 |
gene6_1 |
gene6 |
741 |
True |
False |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPAPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
99.7 |
False |
NA |
1.1 |
NA |
NA |
NA |
NA |
NA |
NA |
gene6_1_0:2D:TCA-T |
gene6 |
gene6_1 |
gene6 |
741 |
True |
False |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSGPVHFRWWVEGKEATGYGEGG* |
65.8 |
True |
NA |
NA |
47.4 |
96.6 |
NA |
49.8 |
NA |
NA |
gene7_1_ref |
gene7 |
gene7_1 |
gene7 |
339 |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARAVGWPPVRAYRRNALRDEARLVKVAVDGAPYLRKVDLAAHDGYAALLRALHGMFASCLVAGAGADGAGRIDTAAEYMPTYEDKDGDWMLVGDVPFKMFVDSCKRIRLMKSSEAVNLSPRTSSRQ* |
NA |
False |
100.0 |
100.0 |
41.8 |
53.1 |
49.2 |
51.1 |
44.0 |
44.4 |
||
gene7_1_-1:1D:CG-C |
gene7 |
gene7_1 |
gene7 |
339 |
True |
False |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARPWAGRRSARTGATRCATRPGS* |
43.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
54.6 |
NA |
gene7_1_2:1I:G-GA |
gene7 |
gene7_1 |
gene7 |
339 |
True |
False |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARDRGLAAGPRVPAQRAARRGQAREGGRGRRAVPAEGGPRGARRVRGPAPRAPRHVRLLPRCRSRSRRGGADRHRRRVHAHLRGQGRRLDARRRRPLQDVRGLVQEDPPHEELRGRQPISEDIIPAVIVVGVDAICPTRLISPN* |
49.0 |
True |
NA |
NA |
58.2 |
46.9 |
50.8 |
48.9 |
1.4 |
55.6 |
gene8_1_ref |
gene8 |
gene8_1 |
gene8 |
1825 |
False |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQPLPTPMPPHQPYHHHLHHLHHHLSPFSPPPLAQPVPSYHHHHFQEEPIATATAPHGGAQAGAAGGGNNEGSGAGSRRGLSGRANHVAPVTSPSSAAHASLPSAAGGGAAASSCRLMELDPADSPSPPRRPEADDGTDTVKLFGVALQGKKKKRAHQEDGDDGNHEQGSSDV* |
NA |
False |
100.0 |
98.4 |
55.0 |
65.5 |
54.6 |
52.5 |
63.6 |
51.5 |
||
gene8_1_2:1I:C-CT |
gene8 |
gene8_1 |
gene8 |
1825 |
True |
False |
False |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFQEDSGGQVGVRQRVLQEGRQAPTRRDPPEEVVAAAADADAAAPALPPPPPPSPPPPQPVLPAAAGTAGAVVPPPPLPRRAHRHRHRAARRCSSRRRRWRQQ* |
39.1 |
True |
NA |
1.6 |
45.0 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9_1_ref |
gene9 |
gene9_1 |
gene9 |
339 |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
NA |
False |
100.0 |
100.0 |
49.3 |
55.0 |
53.7 |
54.2 |
29.6 |
38.5 |
||
gene9_1_-2:1D:GC-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVWPSPRASSWAGPRPRPSRWRAPSR* |
34.0 |
True |
NA |
NA |
NA |
NA |
46.3 |
NA |
2.3 |
2.4 |
gene9_1_-2:1D:GC-G,-4:1D:TG-T |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVCHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
42.1 |
gene9_1_-2:1I:G-GA |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVTGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
5.6 |
8.9 |
gene9_1_-2:1I:G-GC |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVPGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3.0 |
gene9_1_-2:1I:G-GT |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVSGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
50.7 |
45.0 |
NA |
NA |
56.5 |
1.1 |
gene9_1_-2:2D:GCT-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
45.8 |
2.5 |
1.9 |
gene9_1_0:3D:GTGC-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
2.3 |
2.1 |
Reference |
Locus |
SNP |
INDEL |
Haplotype_Name |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
() |
() |
nan |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene2 |
gene2_1 |
nan |
(3792, ‘ACT’, ‘A’) |
-1:2D:ACT-A |
0.0 |
0.0 |
51.8 |
45.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene3 |
gene3_1 |
(3145, ‘A’, ‘C’) |
(3120, ‘C’, ‘CG’),(3121, ‘G’, ‘GT’),(3120, ‘CG’, ‘C’),(3120, ‘CG’, ‘C’),(3120, ‘CGG’, ‘C’),(3120, ‘CGGGGT’, ‘C’),(3118, ‘TACGGGGTG’, ‘T’),(3121, ‘GGGGTGAAGTC’, ‘G’),(3085, ‘TGCTCACTTGCTGACATACCTAGGTACTC’, ‘T’),(3116, ‘CCTACGGGG’, ‘C’) |
-1:1I:C-CG,-2:1I:G-GT,-1:1D:CG-C,-1:1D:CG-C,-26:S:A-C,-1:2D:CGG-C,-1:5D:CGGGGT-C,1:8D:TACGGGGTG-T,-2:10D:GGGGTGAAGTC-G,34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,3:8D:CCTACGGGG-C |
0.0 |
0.0 |
50.1 |
100.0 |
95.2 |
100.0 |
91.60000000000001 |
92.0 |
gene4 |
gene4_1 |
nan |
(861, ‘G’, ‘GA’),(861, ‘G’, ‘GT’),(860, ‘TG’, ‘T’) |
2:1I:G-GA,2:1I:G-GT,1:1D:TG-T |
0.0 |
0.0 |
51.7 |
35.2 |
0.0 |
0.0 |
46.4 |
58.099999999999994 |
gene5 |
gene5_1 |
nan |
(1212, ‘C’, ‘CA’),(1212, ‘C’, ‘CT’),(1211, ‘AC’, ‘A’),(1212, ‘CCA’, ‘C’),(1212, ‘CCAAT’, ‘C’),(1211, ‘ACCAAT’, ‘A’),(1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’) |
-2:1I:C-CA,-2:1I:C-CT,-1:1D:AC-A,-2:2D:CCA-C,-2:4D:CCAAT-C,-1:5D:ACCAAT-A,-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
0.0 |
0.0 |
61.7 |
0.0 |
56.3 |
57.2 |
91.9 |
50.0 |
gene6 |
gene6_1 |
nan |
(739, ‘TCA’, ‘T’) |
0:2D:TCA-T |
0.0 |
0.0 |
47.4 |
96.6 |
0.0 |
49.8 |
0.0 |
0.0 |
gene7 |
gene7_1 |
nan |
(339, ‘G’, ‘GA’),(336, ‘CG’, ‘C’) |
2:1I:G-GA,-1:1D:CG-C |
0.0 |
0.0 |
58.2 |
46.9 |
50.8 |
48.9 |
56.0 |
55.6 |
gene8 |
gene8_1 |
nan |
(1825, ‘C’, ‘CT’) |
2:1I:C-CT |
0.0 |
1.6 |
45.0 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9 |
gene9_1 |
nan |
(339, ‘G’, ‘GA’),(339, ‘G’, ‘GC’),(339, ‘G’, ‘GT’),(339, ‘GC’, ‘G’),(339, ‘GCT’, ‘G’),(339, ‘GC’, ‘G’),(341, ‘TG’, ‘T’) |
-2:1I:G-GA,-2:1I:G-GC,-2:1I:G-GT,-2:1D:GC-G,-2:2D:GCT-G,-2:1D:GC-G,-4:1D:TG-T |
0.0 |
0.0 |
50.7 |
45.0 |
46.3 |
45.8 |
68.1 |
59.400000000000006 |
Reference |
Locus |
SNP |
INDEL |
Haplotype_Name |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
() |
() |
nan |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
gene2 |
gene2_1 |
nan |
(3792, ‘ACT’, ‘A’) |
-1:2D:ACT-A |
0 |
0 |
1 |
1 |
0 |
0 |
0 |
0 |
gene3 |
gene3_1 |
(3145, ‘A’, ‘C’) |
(3120, ‘C’, ‘CG’),(3121, ‘G’, ‘GT’),(3120, ‘CG’, ‘C’),(3120, ‘CG’, ‘C’),(3120, ‘CGG’, ‘C’),(3120, ‘CGGGGT’, ‘C’),(3118, ‘TACGGGGTG’, ‘T’),(3121, ‘GGGGTGAAGTC’, ‘G’),(3085, ‘TGCTCACTTGCTGACATACCTAGGTACTC’, ‘T’),(3116, ‘CCTACGGGG’, ‘C’) |
-1:1I:C-CG,-2:1I:G-GT,-1:1D:CG-C,-1:1D:CG-C,-26:S:A-C,-1:2D:CGG-C,-1:5D:CGGGGT-C,1:8D:TACGGGGTG-T,-2:10D:GGGGTGAAGTC-G,34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,3:8D:CCTACGGGG-C |
0 |
0 |
1 |
2 |
2 |
2 |
2 |
2 |
gene4 |
gene4_1 |
nan |
(861, ‘G’, ‘GA’),(861, ‘G’, ‘GT’),(860, ‘TG’, ‘T’) |
2:1I:G-GA,2:1I:G-GT,1:1D:TG-T |
0 |
0 |
1 |
1 |
0 |
0 |
1 |
1 |
gene5 |
gene5_1 |
nan |
(1212, ‘C’, ‘CA’),(1212, ‘C’, ‘CT’),(1211, ‘AC’, ‘A’),(1212, ‘CCA’, ‘C’),(1212, ‘CCAAT’, ‘C’),(1211, ‘ACCAAT’, ‘A’),(1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’) |
-2:1I:C-CA,-2:1I:C-CT,-1:1D:AC-A,-2:2D:CCA-C,-2:4D:CCAAT-C,-1:5D:ACCAAT-A,-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
0 |
0 |
1 |
0 |
1 |
1 |
2 |
1 |
gene6 |
gene6_1 |
nan |
(739, ‘TCA’, ‘T’) |
0:2D:TCA-T |
0 |
0 |
1 |
2 |
0 |
1 |
0 |
0 |
gene7 |
gene7_1 |
nan |
(339, ‘G’, ‘GA’),(336, ‘CG’, ‘C’) |
2:1I:G-GA,-1:1D:CG-C |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
gene8 |
gene8_1 |
nan |
(1825, ‘C’, ‘CT’) |
2:1I:C-CT |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
gene9 |
gene9_1 |
nan |
(339, ‘G’, ‘GA’),(339, ‘G’, ‘GC’),(339, ‘G’, ‘GT’),(339, ‘GC’, ‘G’),(339, ‘GCT’, ‘G’),(339, ‘GC’, ‘G’),(341, ‘TG’, ‘T’) |
-2:1I:G-GA,-2:1I:G-GC,-2:1I:G-GT,-2:1D:GC-G,-2:2D:GCT-G,-2:1D:GC-G,-4:1D:TG-T |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
Command used to run SMAP effect-prediction on a
smap effect-prediction haplotype_frequency.tsv genome.fasta borders.gff -a gene_features.gff -u guides.gff -p CAS9 -s 15 -r 20 -t 99 -e dosage -i diploid
Reference |
Locus |
Haplotypes |
target |
edit |
start |
end |
SNP |
INDEL |
Alignment |
FILTER_gRNA_INDEL |
FILTER_gRNA_SNP |
FILTER_gRNA |
Haplotype_Name |
Expected cut site |
atgCheck |
splicingSiteCheck |
stopCodonCheck |
protein_sequence |
pairwiseProteinIdentity (%) |
Effect |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
GGCTCTGTTCTTTTACTCGGCCCTGTTTGACGCTCTGGACACGACCACTCCAAGAGACAGCAACCAGAGGATGCT |
gene1 |
ref |
1790 |
1865 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1817 |
MGSSYDPYPSPGADDLFLYLSDLGPASPSAYLDLPPTPQPQPYPQSQQQQQGSKGPTQDMLLPYISSMLMEDDIDDTFFYDYPDNPALLQAQQSFLDILSDDASSPTTTTGTTNSSASVNHSSSDASASAPPTPAAVDSYSPAPAVQFDGFDLDPAAFFSNGANSDLMSSAFLKGMEEANKFLPSQDKLVIDLDPPDDTKRFVLPTRAAENLAPGFNAAATTVPAAVAMAVKEEEVILAALDAALGSGGVVLGRGRRNRLDDDEEDLELQRRSTKQSALQGDGDERDVFEKYIMTCPETCTEQMQQLRIAMQEEAAKEAAVAAGNGKAKGRRGGREVVDLRTLLVHCAQAVASDDRRSATELLRQIKQHASPQGDATQRLAHCFAEGLQARLAGTGSMVYQSLMAKRTSAADILQAYQLYMAAICFKRVVFVFSNNTIYNAALGKMKIHIVDYGIHYGFQWPCFLRWIADREGGPPEVRITGIDLPQPGFRPTQRIEETGRRLSKYAQQFGVPFKYQAIAASKMESIRAEDLNLDPEEVLIVNCLYQFKNLMDESVVIESPRDIVLNNIRKMRPHTFIHAIVNGSFSAPFFVTRFREALFFYSALFDALDTTTPRDSNQRMLIEENLFGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKQQPLNPDVVQQDIGTSNQEEICDASMS* |
NA |
FALSE |
100 |
100 |
100 |
100 |
100 |
100 |
100 |
100 |
|||
gene2 |
gene2_1 |
AGTGCTAGGTGATGCTGCGCGAGTACTGCGAGATCTAATCACTCAAGTGGAATCTCTCAGGCAGGAACAATCTGCTCTTG |
gene2 |
ref |
3751 |
3831 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
3795 |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
NA |
FALSE |
49.5 |
52.8 |
57.2 |
52.3 |
45.9 |
50.1 |
|||||
gene2 |
gene2_1 |
AGTGCTAGGTGTTGCTGCGCGAGTACTGCGAGATCTAATCACTCAAGTGGAATCTCTCAGGCAGGAGCAATCTGCTCTTG |
gene2 |
0 |
3751 |
3831 |
((3762, ‘A’, ‘T’), (3817, ‘A’, ‘G’)) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-31:S:A-T,24:S:A-G |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
100 |
FALSE |
50.5 |
47.2 |
48.2 |
47.7 |
49.9 |
|||
gene2 |
gene2_1 |
AGTGCTAGGTGATGCTGCGCGAGTACTGCGAGATCTAATCACAAGTGGAATCTCTCAGGCAGGAACAATCTGCTCTTG |
gene2 |
2 |
3751 |
3831 |
() |
((3792, ‘ACT’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:2D:ACT-A |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITSGISQAGTICSCIGAPICQFREE* |
54.8 |
TRUE |
51.8 |
45 |
||||||
gene2 |
gene2_1 |
AGTGCTAGGTGTTGCTGCGCGAGTACTGCGAGATCTAATCAAAGTGGAATCTCTCAGGCAGGAGCAATCTGCTCTTG |
gene2 |
3 |
3751 |
3831 |
((3762, ‘A’, ‘T’), (3817, ‘A’, ‘G’)) |
((3792, ‘ACTC’, ‘A’),) |
(data not shown) |
TRUE |
FALSE |
TRUE |
-1:3D:ACTC-A,-31:S:A-T,24:S:A-G |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLIKVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
99.5 |
FALSE |
55 |
42.8 |
54.1 |
|||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
ref |
3078 |
3157 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
3121 |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
NA |
FALSE |
100 |
97 |
44.3 |
48 |
4.2 |
5 |
|||||
gene3 |
gene3_1 |
CTGACGTGCTCACGTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3091, ‘T’, ‘G’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
28:S:T-G |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
3 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACATCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3148, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-29:S:G-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
5.6 |
|||||||
gene3 |
gene3_1 |
CTGACGTACTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3085, ‘G’, ‘A’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
34:S:G-A |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
4.4 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
-1 |
3078 |
3157 |
() |
((3120, ‘C’, ‘CG’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1I:C-CG |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
TRUE |
47.9 |
55.5 |
47.6 |
40.3 |
47.5 |
56 |
||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
-1 |
3078 |
3157 |
() |
((3121, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GT |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
63.1 |
TRUE |
44.5 |
7.6 |
9 |
|||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACTGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3120, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
TRUE |
TRUE |
-1:S:G-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYWVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
FALSE |
3 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
1 |
3078 |
3157 |
() |
((3120, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1D:CG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
TRUE |
24.6 |
22 |
||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGTGAAGTCTCTGTCGGACGAGCCCAGCCAGCTCT |
gene3 |
1 |
3078 |
3157 |
((3145, ‘A’, ‘C’),) |
((3120, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
FALSE |
TRUE |
-1:1D:CG-C,-26:S:A-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
TRUE |
3 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
2 |
3078 |
3157 |
() |
((3120, ‘CGG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:2D:CGG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.5 |
TRUE |
2.2 |
59.7 |
4.2 |
2 |
||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
3 |
3078 |
3157 |
() |
((3120, ‘CGGG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:3D:CGGG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
FALSE |
4.2 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
5 |
3078 |
3157 |
() |
((3120, ‘CGGGGT’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:5D:CGGGGT-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
TRUE |
1.7 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
8 |
3078 |
3157 |
() |
((3118, ‘TACGGGGTG’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:8D:TACGGGGTG-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSA* |
63.3 |
TRUE |
2.5 |
|||||||
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
10 |
3078 |
3157 |
() |
((3121, ‘GGGGTGAAGTC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:10D:GGGGTGAAGTC-G |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVCRTSTASSCPAAAAWTRQWTTRGACCRPKPPPRSRPQATLCSAR* |
69.3 |
TRUE |
47.6 |
|||||||
gene3 |
gene3_1 |
CTGACGTTGCTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
36 |
3078 |
3157 |
() |
((3085, ‘TGCTCACTTGCTGACATACCTAGGTACTC’, ‘T’), (3116, ‘CCTACGGGG’, ‘C’)) |
(data not shown) |
TRUE |
nan |
TRUE |
34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,3:8D:CCTACGGGG-C |
3121 |
FALSE |
TRUE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLX* |
62.2 |
TRUE |
3.5 |
|||||||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
ref |
827 |
905 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
861 |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
NA |
FALSE |
100 |
98.8 |
48.3 |
64.8 |
98.4 |
98.7 |
53.6 |
41.9 |
|||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGAGAACCT |
gene4 |
-6 |
827 |
905 |
() |
((78, ‘A——’, ‘AGAACCT’),) |
(data not shown) |
FALSE |
nan |
FALSE |
-781:0I:A——-AGAACCT |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
100 |
FALSE |
1.2 |
1.6 |
1.3 |
|||||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGACTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
-1 |
827 |
905 |
() |
((861, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GA |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGL* |
13.8 |
TRUE |
1.5 |
|||||||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGTCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
-1 |
827 |
905 |
() |
((861, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GT |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCLRCQQDAGCVVEGEEALHSDAVDGAGAPGPDLQALRCECPCAVQLAPPYQKKPQSMEQPWLQLIGMGTISFRLC* |
23.6 |
TRUE |
51.7 |
35.2 |
46.4 |
55.3 |
||||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
1 |
827 |
905 |
() |
((860, ‘TG’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:1D:TG-T |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLSQVPARCRVCCRG* |
16.5 |
TRUE |
1.3 |
|||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
ref |
1190 |
1272 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1212 |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
NA |
FALSE |
100 |
100 |
38.3 |
45.4 |
43.7 |
42.8 |
4.5 |
2.2 |
|||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACACAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
-1 |
1190 |
1272 |
() |
((1212, ‘C’, ‘CA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:C-CA |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHTIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
TRUE |
1.7 |
|||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACTCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
-1 |
1190 |
1272 |
() |
((1212, ‘C’, ‘CT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:C-CT |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
TRUE |
1.2 |
3 |
||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
1 |
1190 |
1272 |
() |
((1211, ‘AC’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1D:AC-A |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHNPSCWTRYPAPRTRACSCWSSTASAA* |
53.9 |
TRUE |
2.1 |
12.3 |
18.5 |
|||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
2 |
1190 |
1272 |
() |
((1212, ‘CCA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:2D:CCA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
TRUE |
6 |
4.3 |
||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
3 |
1190 |
1272 |
() |
((1208, ‘CCCA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:3D:CCCA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
FALSE |
1.7 |
45.5 |
||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACTCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
3 |
1190 |
1272 |
() |
((1212, ‘CCAA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:3D:CCAA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
FALSE |
54.6 |
1.9 |
2.3 |
|||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
4 |
1190 |
1272 |
() |
((1212, ‘CCAAT’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:4D:CCAAT-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPSCWTRYPAPRTRACSCWSSTASAA* |
53.6 |
TRUE |
21.3 |
|||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
5 |
1190 |
1272 |
() |
((1211, ‘ACCAAT’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:5D:ACCAAT-A |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.1 |
TRUE |
1.2 |
1.2 |
||||||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
21 |
1190 |
1272 |
() |
((1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
1212 |
FALSE |
TRUE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPX* |
49.2 |
TRUE |
59.6 |
56.3 |
57.2 |
71.2 |
||||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
ref |
704 |
781 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
741 |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
NA |
FALSE |
100 |
96.7 |
52.6 |
100 |
50.2 |
100 |
100 |
||||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGCCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((745, ‘T’, ‘C’),) |
() |
(data not shown) |
nan |
TRUE |
TRUE |
-6:S:T-C |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPAPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
99.7 |
FALSE |
1.1 |
|||||||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCATACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((749, ‘G’, ‘A’),) |
() |
(data not shown) |
nan |
TRUE |
TRUE |
-10:S:G-A |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
100 |
FALSE |
1.1 |
|||||||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCGTACATTTTCTGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((759, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-20:S:G-T |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
100 |
FALSE |
1.1 |
3.4 |
||||||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCCGGTCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
2 |
704 |
781 |
() |
((739, ‘TCA’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
0:2D:TCA-T |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSGPVHFRWWVEGKEATGYGEGG* |
65.8 |
TRUE |
47.4 |
96.6 |
49.8 |
|||||
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGGCCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
ref |
304 |
390 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
339 |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARAVGWPPVRAYRRNALRDEARLVKVAVDGAPYLRKVDLAAHDGYAALLRALHGMFASCLVAGAGADGAGRIDTAAEYMPTYEDKDGDWMLVGDVPFKMFVDSCKRIRLMKSSEAVNLSPRTSSRQ* |
NA |
FALSE |
100 |
100 |
41.8 |
53.1 |
49.2 |
51.1 |
44 |
44.4 |
|||
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGGACCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
-1 |
304 |
390 |
() |
((339, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GA |
339 |
FALSE |
FALSE |
FALSE |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARDRGLAAGPRVPAQRAARRGQAREGGRGRRAVPAEGGPRGARRVRGPAPRAPRHVRLLPRCRSRSRRGGADRHRRRVHAHLRGQGRRLDARRRRPLQDVRGLVQEDPPHEELRGRQPISEDIIPAVIVVGVDAICPTRLISPN* |
49 |
TRUE |
58.2 |
46.9 |
50.8 |
48.9 |
1.4 |
55.6 |
||
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGCCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
1 |
304 |
390 |
() |
((336, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1D:CG-C |
339 |
FALSE |
FALSE |
FALSE |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARPWAGRRSARTGATRCATRPGS* |
43.4 |
TRUE |
54.6 |
|||||||
gene8 |
gene8_1 |
GCTGAATATTTTTTTCTCTTTGGTTTGTTGCTGTTGTTGTTGTTGGCTGATGCAGGGCTTCAGGAAGATAGTGGCGGACAGGTGGGA |
gene8 |
ref |
1767 |
1854 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1825 |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQPLPTPMPPHQPYHHHLHHLHHHLSPFSPPPLAQPVPSYHHHHFQEEPIATATAPHGGAQAGAAGGGNNEGSGAGSRRGLSGRANHVAPVTSPSSAAHASLPSAAGGGAAASSCRLMELDPADSPSPPRRPEADDGTDTVKLFGVALQGKKKKRAHQEDGDDGNHEQGSSDV* |
NA |
FALSE |
100 |
98.4 |
55 |
65.5 |
54.6 |
52.5 |
63.6 |
51.5 |
|||
gene8 |
gene8_1 |
GCTGAATATTTTTTTCTCTTTGGTTTGTTGCTGTTGTTGTTGTTGGCTGATGCAGGGCTTTCAGGAAGATAGTGGCGGACAGGTGGGA |
gene8 |
-1 |
1767 |
1854 |
() |
((1825, ‘C’, ‘CT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:C-CT |
1825 |
FALSE |
FALSE |
FALSE |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFQEDSGGQVGVRQRVLQEGRQAPTRRDPPEEVVAAAADADAAAPALPPPPPPSPPPPQPVLPAAAGTAGAVVPPPPLPRRAHRHRHRAARRCSSRRRRWRQQ* |
39.1 |
TRUE |
1.6 |
45 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
|
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
ref |
315 |
402 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
339 |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
NA |
FALSE |
100 |
100 |
49.3 |
55 |
53.7 |
54.2 |
29.6 |
38.5 |
|||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGACTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GA |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVTGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
5.6 |
8.9 |
||||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGCCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GC’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GC |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVPGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
1.2 |
3 |
||||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GT |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVSGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
50.7 |
45 |
56.5 |
1.1 |
||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
1 |
315 |
402 |
() |
((339, ‘GC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1D:GC-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVWPSPRASSWAGPRPRPSRWRAPSR* |
34 |
TRUE |
46.3 |
2.3 |
2.4 |
|||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
2 |
315 |
402 |
() |
((339, ‘GCT’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:2D:GCT-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
45.8 |
2.5 |
1.9 |
|||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
2 |
315 |
402 |
() |
((339, ‘GC’, ‘G’), (341, ‘TG’, ‘T’)) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1D:GC-G,-4:1D:TG-T |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVCHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
42.1 |
|||||||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
3 |
315 |
402 |
() |
((337, ‘GTGC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
0:3D:GTGC-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
99.7 |
FALSE |
2.3 |
2.1 |
Haplotype |
Reference |
Locus |
target |
Expected cut site |
FILTER_gRNA |
atgCheck |
splicingSiteCheck |
protein_sequence |
pairwiseProteinIdentity (%) |
Effect |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1_1_ref |
gene1 |
gene1_1 |
gene1 |
1817 |
False |
MGSSYDPYPSPGADDLFLYLSDLGPASPSAYLDLPPTPQPQPYPQSQQQQQGSKGPTQDMLLPYISSMLMEDDIDDTFFYDYPDNPALLQAQQSFLDILSDDASSPTTTTGTTNSSASVNHSSSDASASAPPTPAAVDSYSPAPAVQFDGFDLDPAAFFSNGANSDLMSSAFLKGMEEANKFLPSQDKLVIDLDPPDDTKRFVLPTRAAENLAPGFNAAATTVPAAVAMAVKEEEVILAALDAALGSGGVVLGRGRRNRLDDDEEDLELQRRSTKQSALQGDGDERDVFEKYIMTCPETCTEQMQQLRIAMQEEAAKEAAVAAGNGKAKGRRGGREVVDLRTLLVHCAQAVASDDRRSATELLRQIKQHASPQGDATQRLAHCFAEGLQARLAGTGSMVYQSLMAKRTSAADILQAYQLYMAAICFKRVVFVFSNNTIYNAALGKMKIHIVDYGIHYGFQWPCFLRWIADREGGPPEVRITGIDLPQPGFRPTQRIEETGRRLSKYAQQFGVPFKYQAIAASKMESIRAEDLNLDPEEVLIVNCLYQFKNLMDESVVIESPRDIVLNNIRKMRPHTFIHAIVNGSFSAPFFVTRFREALFFYSALFDALDTTTPRDSNQRMLIEENLFGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKQQPLNPDVVQQDIGTSNQEEICDASMS* |
NA |
False |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
||
gene2_1_ref |
gene2 |
gene2_1 |
gene2 |
3795 |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
NA |
False |
100.0 |
100.0 |
48.2 |
NA |
57.2 |
100.0 |
45.9 |
100.0 |
||
gene2_1_-1:2D:ACT-A |
gene2 |
gene2_1 |
gene2 |
3795 |
True |
False |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITSGISQAGTICSCIGAPICQFREE* |
54.8 |
True |
NA |
NA |
51.8 |
45.0 |
NA |
NA |
NA |
NA |
gene2_1_-1:3D:ACTC-A |
gene2 |
gene2_1 |
gene2 |
3795 |
True |
False |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLIKVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
99.5 |
False |
NA |
NA |
NA |
55.0 |
42.8 |
NA |
54.1 |
NA |
gene3_1_ref |
gene3 |
gene3_1 |
gene3 |
3121 |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
NA |
False |
100.0 |
100.0 |
49.9 |
NA |
52.4 |
NA |
4.2 |
5.0 |
||
gene3_1_-1:1D:CG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
24.6 |
25.0 |
gene3_1_-1:1I:C-CG |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
True |
NA |
NA |
47.9 |
55.5 |
47.6 |
40.3 |
47.5 |
56.0 |
gene3_1_-1:2D:CGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.5 |
True |
NA |
NA |
2.2 |
NA |
NA |
59.7 |
4.2 |
2.0 |
gene3_1_-1:3D:CGGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
4.2 |
NA |
gene3_1_-1:5D:CGGGGT-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
NA |
gene3_1_-1:S:G-T |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYWVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
3.0 |
gene3_1_-2:10D:GGGGTGAAGTC-G |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVCRTSTASSCPAAAAWTRQWTTRGACCRPKPPPRSRPQATLCSAR* |
69.3 |
True |
NA |
NA |
NA |
NA |
47.6 |
NA |
NA |
NA |
gene3_1_-2:1I:G-GT |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
63.1 |
True |
NA |
NA |
NA |
44.5 |
NA |
NA |
7.6 |
9.0 |
gene3_1_1:8D:TACGGGGTG-T |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSA* |
63.3 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
2.5 |
NA |
gene3_1_34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,3:8D:CCTACGGGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
True |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLX* |
62.2 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
3.5 |
NA |
gene4_1_ref |
gene4 |
gene4_1 |
gene4 |
861 |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
NA |
False |
100.0 |
100.0 |
48.3 |
64.8 |
100.0 |
100.0 |
53.6 |
41.9 |
||
gene4_1_1:1D:TG-T |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLSQVPARCRVCCRG* |
16.5 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.3 |
gene4_1_2:1I:G-GA |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGL* |
13.8 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.5 |
gene4_1_2:1I:G-GT |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCLRCQQDAGCVVEGEEALHSDAVDGAGAPGPDLQALRCECPCAVQLAPPYQKKPQSMEQPWLQLIGMGTISFRLC* |
23.6 |
True |
NA |
NA |
51.7 |
35.2 |
NA |
NA |
46.4 |
55.3 |
gene5_1_ref |
gene5 |
gene5_1 |
gene5 |
1212 |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
NA |
False |
100.0 |
100.0 |
38.3 |
45.4 |
43.7 |
42.8 |
4.5 |
2.2 |
||
gene5_1_-1:1D:AC-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHNPSCWTRYPAPRTRACSCWSSTASAA* |
53.9 |
True |
NA |
NA |
2.1 |
NA |
NA |
NA |
12.3 |
18.5 |
gene5_1_-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
True |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPX* |
49.2 |
True |
NA |
NA |
59.6 |
NA |
56.3 |
57.2 |
71.2 |
NA |
gene5_1_-1:5D:ACCAAT-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.1 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
1.2 |
gene5_1_-2:1I:C-CA |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHTIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
gene5_1_-2:1I:C-CT |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3.0 |
gene5_1_-2:2D:CCA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
6.0 |
4.3 |
gene5_1_-2:3D:CCAA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
False |
NA |
NA |
NA |
54.6 |
NA |
NA |
1.9 |
2.3 |
gene5_1_-2:4D:CCAAT-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPSCWTRYPAPRTRACSCWSSTASAA* |
53.6 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
21.3 |
gene5_1_2:3D:CCCA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
45.5 |
gene6_1_ref |
gene6 |
gene6_1 |
gene6 |
741 |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
NA |
False |
100.0 |
97.8 |
52.6 |
3.4 |
100.0 |
50.2 |
100.0 |
100.0 |
||
gene6_1_-10:S:G-A |
gene6 |
gene6_1 |
gene6 |
741 |
True |
False |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
100.0 |
False |
NA |
1.1 |
NA |
NA |
NA |
NA |
NA |
NA |
gene6_1_-6:S:T-C |
gene6 |
gene6_1 |
gene6 |
741 |
True |
False |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPAPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
99.7 |
False |
NA |
1.1 |
NA |
NA |
NA |
NA |
NA |
NA |
gene6_1_0:2D:TCA-T |
gene6 |
gene6_1 |
gene6 |
741 |
True |
False |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSGPVHFRWWVEGKEATGYGEGG* |
65.8 |
True |
NA |
NA |
47.4 |
96.6 |
NA |
49.8 |
NA |
NA |
gene7_1_ref |
gene7 |
gene7_1 |
gene7 |
339 |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARAVGWPPVRAYRRNALRDEARLVKVAVDGAPYLRKVDLAAHDGYAALLRALHGMFASCLVAGAGADGAGRIDTAAEYMPTYEDKDGDWMLVGDVPFKMFVDSCKRIRLMKSSEAVNLSPRTSSRQ* |
NA |
False |
100.0 |
100.0 |
41.8 |
53.1 |
49.2 |
51.1 |
44.0 |
44.4 |
||
gene7_1_-1:1D:CG-C |
gene7 |
gene7_1 |
gene7 |
339 |
True |
False |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARPWAGRRSARTGATRCATRPGS* |
43.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
54.6 |
NA |
gene7_1_2:1I:G-GA |
gene7 |
gene7_1 |
gene7 |
339 |
True |
False |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARDRGLAAGPRVPAQRAARRGQAREGGRGRRAVPAEGGPRGARRVRGPAPRAPRHVRLLPRCRSRSRRGGADRHRRRVHAHLRGQGRRLDARRRRPLQDVRGLVQEDPPHEELRGRQPISEDIIPAVIVVGVDAICPTRLISPN* |
49.0 |
True |
NA |
NA |
58.2 |
46.9 |
50.8 |
48.9 |
1.4 |
55.6 |
gene8_1_ref |
gene8 |
gene8_1 |
gene8 |
1825 |
False |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQPLPTPMPPHQPYHHHLHHLHHHLSPFSPPPLAQPVPSYHHHHFQEEPIATATAPHGGAQAGAAGGGNNEGSGAGSRRGLSGRANHVAPVTSPSSAAHASLPSAAGGGAAASSCRLMELDPADSPSPPRRPEADDGTDTVKLFGVALQGKKKKRAHQEDGDDGNHEQGSSDV* |
NA |
False |
100.0 |
98.4 |
55.0 |
65.5 |
54.6 |
52.5 |
63.6 |
51.5 |
||
gene8_1_2:1I:C-CT |
gene8 |
gene8_1 |
gene8 |
1825 |
True |
False |
False |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFQEDSGGQVGVRQRVLQEGRQAPTRRDPPEEVVAAAADADAAAPALPPPPPPSPPPPQPVLPAAAGTAGAVVPPPPLPRRAHRHRHRAARRCSSRRRRWRQQ* |
39.1 |
True |
NA |
1.6 |
45.0 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9_1_ref |
gene9 |
gene9_1 |
gene9 |
339 |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
NA |
False |
100.0 |
100.0 |
49.3 |
55.0 |
53.7 |
54.2 |
29.6 |
38.5 |
||
gene9_1_-2:1D:GC-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVWPSPRASSWAGPRPRPSRWRAPSR* |
34.0 |
True |
NA |
NA |
NA |
NA |
46.3 |
NA |
2.3 |
2.4 |
gene9_1_-2:1D:GC-G,-4:1D:TG-T |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVCHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
42.1 |
gene9_1_-2:1I:G-GA |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVTGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
5.6 |
8.9 |
gene9_1_-2:1I:G-GC |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVPGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3.0 |
gene9_1_-2:1I:G-GT |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVSGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
50.7 |
45.0 |
NA |
NA |
56.5 |
1.1 |
gene9_1_-2:2D:GCT-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
45.8 |
2.5 |
1.9 |
gene9_1_0:3D:GTGC-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
2.3 |
2.1 |
Reference |
Locus |
SNP |
INDEL |
Haplotype_Name |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
() |
() |
nan |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene2 |
gene2_1 |
nan |
(3792, ‘ACT’, ‘A’) |
-1:2D:ACT-A |
0.0 |
0.0 |
51.8 |
45.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene3 |
gene3_1 |
(3145, ‘A’, ‘C’) |
(3120, ‘C’, ‘CG’),(3121, ‘G’, ‘GT’),(3120, ‘CG’, ‘C’),(3120, ‘CG’, ‘C’),(3120, ‘CGG’, ‘C’),(3120, ‘CGGGGT’, ‘C’),(3118, ‘TACGGGGTG’, ‘T’),(3121, ‘GGGGTGAAGTC’, ‘G’),(3085, ‘TGCTCACTTGCTGACATACCTAGGTACTC’, ‘T’),(3116, ‘CCTACGGGG’, ‘C’) |
-1:1I:C-CG,-2:1I:G-GT,-1:1D:CG-C,-1:1D:CG-C,-26:S:A-C,-1:2D:CGG-C,-1:5D:CGGGGT-C,1:8D:TACGGGGTG-T,-2:10D:GGGGTGAAGTC-G,34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,3:8D:CCTACGGGG-C |
0.0 |
0.0 |
50.1 |
100.0 |
95.2 |
100.0 |
91.60000000000001 |
92.0 |
gene4 |
gene4_1 |
nan |
(861, ‘G’, ‘GA’),(861, ‘G’, ‘GT’),(860, ‘TG’, ‘T’) |
2:1I:G-GA,2:1I:G-GT,1:1D:TG-T |
0.0 |
0.0 |
51.7 |
35.2 |
0.0 |
0.0 |
46.4 |
58.099999999999994 |
gene5 |
gene5_1 |
nan |
(1212, ‘C’, ‘CA’),(1212, ‘C’, ‘CT’),(1211, ‘AC’, ‘A’),(1212, ‘CCA’, ‘C’),(1212, ‘CCAAT’, ‘C’),(1211, ‘ACCAAT’, ‘A’),(1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’) |
-2:1I:C-CA,-2:1I:C-CT,-1:1D:AC-A,-2:2D:CCA-C,-2:4D:CCAAT-C,-1:5D:ACCAAT-A,-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
0.0 |
0.0 |
61.7 |
0.0 |
56.3 |
57.2 |
91.9 |
50.0 |
gene6 |
gene6_1 |
nan |
(739, ‘TCA’, ‘T’) |
0:2D:TCA-T |
0.0 |
0.0 |
47.4 |
96.6 |
0.0 |
49.8 |
0.0 |
0.0 |
gene7 |
gene7_1 |
nan |
(339, ‘G’, ‘GA’),(336, ‘CG’, ‘C’) |
2:1I:G-GA,-1:1D:CG-C |
0.0 |
0.0 |
58.2 |
46.9 |
50.8 |
48.9 |
56.0 |
55.6 |
gene8 |
gene8_1 |
nan |
(1825, ‘C’, ‘CT’) |
2:1I:C-CT |
0.0 |
1.6 |
45.0 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9 |
gene9_1 |
nan |
(339, ‘G’, ‘GA’),(339, ‘G’, ‘GC’),(339, ‘G’, ‘GT’),(339, ‘GC’, ‘G’),(339, ‘GCT’, ‘G’),(339, ‘GC’, ‘G’),(341, ‘TG’, ‘T’) |
-2:1I:G-GA,-2:1I:G-GC,-2:1I:G-GT,-2:1D:GC-G,-2:2D:GCT-G,-2:1D:GC-G,-4:1D:TG-T |
0.0 |
0.0 |
50.7 |
45.0 |
46.3 |
45.8 |
68.1 |
59.400000000000006 |
Reference |
Locus |
SNP |
INDEL |
Haplotype_Name |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
() |
() |
nan |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
gene2 |
gene2_1 |
nan |
(3792, ‘ACT’, ‘A’) |
-1:2D:ACT-A |
0 |
0 |
1 |
1 |
0 |
0 |
0 |
0 |
gene3 |
gene3_1 |
(3145, ‘A’, ‘C’) |
(3120, ‘C’, ‘CG’),(3121, ‘G’, ‘GT’),(3120, ‘CG’, ‘C’),(3120, ‘CG’, ‘C’),(3120, ‘CGG’, ‘C’),(3120, ‘CGGGGT’, ‘C’),(3118, ‘TACGGGGTG’, ‘T’),(3121, ‘GGGGTGAAGTC’, ‘G’),(3085, ‘TGCTCACTTGCTGACATACCTAGGTACTC’, ‘T’),(3116, ‘CCTACGGGG’, ‘C’) |
-1:1I:C-CG,-2:1I:G-GT,-1:1D:CG-C,-1:1D:CG-C,-26:S:A-C,-1:2D:CGG-C,-1:5D:CGGGGT-C,1:8D:TACGGGGTG-T,-2:10D:GGGGTGAAGTC-G,34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,3:8D:CCTACGGGG-C |
0 |
0 |
1 |
2 |
2 |
2 |
2 |
2 |
gene4 |
gene4_1 |
nan |
(861, ‘G’, ‘GA’),(861, ‘G’, ‘GT’),(860, ‘TG’, ‘T’) |
2:1I:G-GA,2:1I:G-GT,1:1D:TG-T |
0 |
0 |
1 |
1 |
0 |
0 |
1 |
1 |
gene5 |
gene5_1 |
nan |
(1212, ‘C’, ‘CA’),(1212, ‘C’, ‘CT’),(1211, ‘AC’, ‘A’),(1212, ‘CCA’, ‘C’),(1212, ‘CCAAT’, ‘C’),(1211, ‘ACCAAT’, ‘A’),(1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’) |
-2:1I:C-CA,-2:1I:C-CT,-1:1D:AC-A,-2:2D:CCA-C,-2:4D:CCAAT-C,-1:5D:ACCAAT-A,-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
0 |
0 |
1 |
0 |
1 |
1 |
2 |
1 |
gene6 |
gene6_1 |
nan |
(739, ‘TCA’, ‘T’) |
0:2D:TCA-T |
0 |
0 |
1 |
2 |
0 |
1 |
0 |
0 |
gene7 |
gene7_1 |
nan |
(339, ‘G’, ‘GA’),(336, ‘CG’, ‘C’) |
2:1I:G-GA,-1:1D:CG-C |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
gene8 |
gene8_1 |
nan |
(1825, ‘C’, ‘CT’) |
2:1I:C-CT |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
gene9 |
gene9_1 |
nan |
(339, ‘G’, ‘GA’),(339, ‘G’, ‘GC’),(339, ‘G’, ‘GT’),(339, ‘GC’, ‘G’),(339, ‘GCT’, ‘G’),(339, ‘GC’, ‘G’),(341, ‘TG’, ‘T’) |
-2:1I:G-GA,-2:1I:G-GC,-2:1I:G-GT,-2:1D:GC-G,-2:2D:GCT-G,-2:1D:GC-G,-4:1D:TG-T |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
Command used to run SMAP effect-prediction on a
smap effect-prediction haplotype_frequency.tsv genome.fasta borders.gff -a gene_features.gff -u guides.gff -p CAS9 -s 5 -r 5 -t 50 -e dosage -i diploid
Reference |
Locus |
Haplotypes |
target |
edit |
start |
end |
SNP |
INDEL |
Alignment |
FILTER_gRNA_INDEL |
FILTER_gRNA_SNP |
FILTER_gRNA |
Haplotype_Name |
Expected cut site |
atgCheck |
splicingSiteCheck |
stopCodonCheck |
protein_sequence |
pairwiseProteinIdentity (%) |
Effect |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
GGCTCTGTTCTTTTACTCGGCCCTGTTTGACGCTCTGGACACGACCACTCCAAGAGACAGCAACCAGAGGATGCT |
gene1 |
ref |
1790 |
1865 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1817 |
MGSSYDPYPSPGADDLFLYLSDLGPASPSAYLDLPPTPQPQPYPQSQQQQQGSKGPTQDMLLPYISSMLMEDDIDDTFFYDYPDNPALLQAQQSFLDILSDDASSPTTTTGTTNSSASVNHSSSDASASAPPTPAAVDSYSPAPAVQFDGFDLDPAAFFSNGANSDLMSSAFLKGMEEANKFLPSQDKLVIDLDPPDDTKRFVLPTRAAENLAPGFNAAATTVPAAVAMAVKEEEVILAALDAALGSGGVVLGRGRRNRLDDDEEDLELQRRSTKQSALQGDGDERDVFEKYIMTCPETCTEQMQQLRIAMQEEAAKEAAVAAGNGKAKGRRGGREVVDLRTLLVHCAQAVASDDRRSATELLRQIKQHASPQGDATQRLAHCFAEGLQARLAGTGSMVYQSLMAKRTSAADILQAYQLYMAAICFKRVVFVFSNNTIYNAALGKMKIHIVDYGIHYGFQWPCFLRWIADREGGPPEVRITGIDLPQPGFRPTQRIEETGRRLSKYAQQFGVPFKYQAIAASKMESIRAEDLNLDPEEVLIVNCLYQFKNLMDESVVIESPRDIVLNNIRKMRPHTFIHAIVNGSFSAPFFVTRFREALFFYSALFDALDTTTPRDSNQRMLIEENLFGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKQQPLNPDVVQQDIGTSNQEEICDASMS* |
NA |
FALSE |
100 |
100 |
100 |
100 |
100 |
100 |
100 |
100 |
|||
gene2 |
gene2_1 |
AGTGCTAGGTGATGCTGCGCGAGTACTGCGAGATCTAATCACTCAAGTGGAATCTCTCAGGCAGGAACAATCTGCTCTTG |
gene2 |
ref |
3751 |
3831 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
3795 |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
NA |
FALSE |
49.5 |
52.8 |
NA |
NA |
57.2 |
52.3 |
45.9 |
50.1 |
|||
gene2 |
gene2_1 |
AGTGCTAGGTGTTGCTGCGCGAGTACTGCGAGATCTAATCACTCAAGTGGAATCTCTCAGGCAGGAGCAATCTGCTCTTG |
gene2 |
0 |
3751 |
3831 |
((3762, ‘A’, ‘T’), (3817, ‘A’, ‘G’)) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-31:S:A-T,24:S:A-G |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
100 |
FALSE |
50.5 |
47.2 |
48.2 |
NA |
NA |
47.7 |
NA |
49.9 |
gene2 |
gene2_1 |
AGTGCTAGGTGATGCTGCGCGAGTACTGCGAGATCTAATCACAAGTGGAATCTCTCAGGCAGGAACAATCTGCTCTTG |
gene2 |
2 |
3751 |
3831 |
() |
((3792, ‘ACT’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:2D:ACT-A |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITSGISQAGTICSCIGAPICQFREE* |
54.8 |
FALSE |
NA |
NA |
51.8 |
45 |
NA |
NA |
NA |
NA |
gene2 |
gene2_1 |
AGTGCTAGGTGTTGCTGCGCGAGTACTGCGAGATCTAATCAAAGTGGAATCTCTCAGGCAGGAGCAATCTGCTCTTG |
gene2 |
3 |
3751 |
3831 |
((3762, ‘A’, ‘T’), (3817, ‘A’, ‘G’)) |
((3792, ‘ACTC’, ‘A’),) |
(data not shown) |
TRUE |
FALSE |
TRUE |
-1:3D:ACTC-A,-31:S:A-T,24:S:A-G |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLIKVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
99.5 |
FALSE |
NA |
NA |
NA |
55 |
42.8 |
NA |
54.1 |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
ref |
3078 |
3157 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
3121 |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
NA |
FALSE |
100 |
97 |
44.3 |
NA |
48 |
NA |
4.2 |
5 |
|||
gene3 |
gene3_1 |
CTGACGTGCTCACGTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3091, ‘T’, ‘G’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
28:S:T-G |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
NA |
3 |
NA |
NA |
NA |
NA |
NA |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACATCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3148, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-29:S:G-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
NA |
NA |
5.6 |
NA |
NA |
NA |
NA |
NA |
gene3 |
gene3_1 |
CTGACGTACTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3085, ‘G’, ‘A’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
34:S:G-A |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
NA |
NA |
NA |
NA |
4.4 |
NA |
NA |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
-1 |
3078 |
3157 |
() |
((3120, ‘C’, ‘CG’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1I:C-CG |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
FALSE |
NA |
NA |
47.9 |
55.5 |
47.6 |
40.3 |
47.5 |
56 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
-1 |
3078 |
3157 |
() |
((3121, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GT |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
63.1 |
FALSE |
NA |
NA |
NA |
44.5 |
NA |
NA |
7.6 |
9 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACTGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3120, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
TRUE |
TRUE |
-1:S:G-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYWVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
3 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
1 |
3078 |
3157 |
() |
((3120, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1D:CG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
24.6 |
22 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGTGAAGTCTCTGTCGGACGAGCCCAGCCAGCTCT |
gene3 |
1 |
3078 |
3157 |
((3145, ‘A’, ‘C’),) |
((3120, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
FALSE |
TRUE |
-1:1D:CG-C,-26:S:A-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
3 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
2 |
3078 |
3157 |
() |
((3120, ‘CGG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:2D:CGG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.5 |
FALSE |
NA |
NA |
2.2 |
NA |
NA |
59.7 |
4.2 |
2 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
3 |
3078 |
3157 |
() |
((3120, ‘CGGG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:3D:CGGG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
4.2 |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
5 |
3078 |
3157 |
() |
((3120, ‘CGGGGT’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:5D:CGGGGT-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
8 |
3078 |
3157 |
() |
((3118, ‘TACGGGGTG’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:8D:TACGGGGTG-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSA* |
63.3 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
2.5 |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
10 |
3078 |
3157 |
() |
((3121, ‘GGGGTGAAGTC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:10D:GGGGTGAAGTC-G |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYESLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.2 |
FALSE |
NA |
NA |
NA |
NA |
47.6 |
NA |
NA |
NA |
gene3 |
gene3_1 |
CTGACGTTGCTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
36 |
3078 |
3157 |
() |
((3085, ‘TGCTCACTTGCTGACATACCTAGGTACTC’, ‘T’), (3116, ‘CCTACGGGG’, ‘C’)) |
(data not shown) |
TRUE |
nan |
TRUE |
34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,3:8D:CCTACGGGG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.3 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
3.5 |
NA |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
ref |
827 |
905 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
861 |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
NA |
FALSE |
100 |
98.8 |
48.3 |
64.8 |
98.4 |
98.7 |
53.6 |
41.9 |
|||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGAGAACCT |
gene4 |
-6 |
827 |
905 |
() |
((78, ‘A——’, ‘AGAACCT’),) |
(data not shown) |
FALSE |
nan |
FALSE |
-781:0I:A——-AGAACCT |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
100 |
FALSE |
NA |
1.2 |
NA |
NA |
1.6 |
1.3 |
NA |
NA |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGACTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
-1 |
827 |
905 |
() |
((861, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GA |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGL* |
13.8 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.5 |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGTCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
-1 |
827 |
905 |
() |
((861, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GT |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCLRCQQDAGCVVEGEEALHSDAVDGAGAPGPDLQALRCECPCAVQLAPPYQKKPQSMEQPWLQLIGMGTISFRLC* |
23.6 |
TRUE |
NA |
NA |
51.7 |
35.2 |
NA |
NA |
46.4 |
55.3 |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
1 |
827 |
905 |
() |
((860, ‘TG’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:1D:TG-T |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLSQVPARCRVCCRG* |
16.5 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
ref |
1190 |
1272 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1212 |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
NA |
FALSE |
100 |
100 |
38.3 |
45.4 |
43.7 |
42.8 |
4.5 |
2.2 |
|||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACACAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
-1 |
1190 |
1272 |
() |
((1212, ‘C’, ‘CA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:C-CA |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHTIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACTCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
-1 |
1190 |
1272 |
() |
((1212, ‘C’, ‘CT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:C-CT |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
1 |
1190 |
1272 |
() |
((1211, ‘AC’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1D:AC-A |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHNPSCWTRYPAPRTRACSCWSSTASAA* |
53.9 |
FALSE |
NA |
NA |
2.1 |
NA |
NA |
NA |
12.3 |
18.5 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
2 |
1190 |
1272 |
() |
((1212, ‘CCA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:2D:CCA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
6 |
4.3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
3 |
1190 |
1272 |
() |
((1208, ‘CCCA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:3D:CCCA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
45.5 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACTCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
3 |
1190 |
1272 |
() |
((1212, ‘CCAA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:3D:CCAA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
FALSE |
NA |
NA |
NA |
54.6 |
NA |
NA |
1.9 |
2.3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
4 |
1190 |
1272 |
() |
((1212, ‘CCAAT’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:4D:CCAAT-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPSCWTRYPAPRTRACSCWSSTASAA* |
53.6 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
21.3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
5 |
1190 |
1272 |
() |
((1211, ‘ACCAAT’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:5D:ACCAAT-A |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.1 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
1.2 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
21 |
1190 |
1272 |
() |
((1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSCWTRYPAPRTRACSCWSSTASAA* |
53.3 |
FALSE |
NA |
NA |
59.6 |
NA |
56.3 |
57.2 |
71.2 |
NA |
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
ref |
704 |
781 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
741 |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
NA |
FALSE |
100 |
96.7 |
52.6 |
NA |
100 |
50.2 |
100 |
100 |
|||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGCCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((745, ‘T’, ‘C’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-6:S:T-C |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPAPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
99.7 |
FALSE |
NA |
1.1 |
NA |
NA |
NA |
NA |
NA |
NA |
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCATACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((749, ‘G’, ‘A’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-10:S:G-A |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
100 |
FALSE |
NA |
1.1 |
NA |
NA |
NA |
NA |
NA |
NA |
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCGTACATTTTCTGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((759, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-20:S:G-T |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
100 |
FALSE |
NA |
1.1 |
NA |
3.4 |
NA |
NA |
NA |
NA |
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCCGGTCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
2 |
704 |
781 |
() |
((739, ‘TCA’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
0:2D:TCA-T |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSGPVHFRWWVEGKEATGYGEGG* |
65.8 |
FALSE |
NA |
NA |
47.4 |
96.6 |
NA |
49.8 |
NA |
NA |
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGGCCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
ref |
304 |
390 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
339 |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARAVGWPPVRAYRRNALRDEARLVKVAVDGAPYLRKVDLAAHDGYAALLRALHGMFASCLVAGAGADGAGRIDTAAEYMPTYEDKDGDWMLVGDVPFKMFVDSCKRIRLMKSSEAVNLSPRTSSRQ* |
NA |
FALSE |
100 |
100 |
41.8 |
53.1 |
49.2 |
51.1 |
44 |
44.4 |
|||
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGGACCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
-1 |
304 |
390 |
() |
((339, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GA |
339 |
FALSE |
FALSE |
FALSE |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARDRGLAAGPRVPAQRAARRGQAREGGRGRRAVPAEGGPRGARRVRGPAPRAPRHVRLLPRCRSRSRRGGADRHRRRVHAHLRGQGRRLDARRRRPLQDVRGLVQEDPPHEELRGRQPISEDIIPAVIVVGVDAICPTRLISPN* |
49 |
TRUE |
NA |
NA |
58.2 |
46.9 |
50.8 |
48.9 |
1.4 |
55.6 |
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGCCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
1 |
304 |
390 |
() |
((336, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1D:CG-C |
339 |
FALSE |
FALSE |
FALSE |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARPWAGRRSARTGATRCATRPGS* |
43.4 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
54.6 |
NA |
gene8 |
gene8_1 |
GCTGAATATTTTTTTCTCTTTGGTTTGTTGCTGTTGTTGTTGTTGGCTGATGCAGGGCTTCAGGAAGATAGTGGCGGACAGGTGGGA |
gene8 |
ref |
1767 |
1854 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1825 |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQPLPTPMPPHQPYHHHLHHLHHHLSPFSPPPLAQPVPSYHHHHFQEEPIATATAPHGGAQAGAAGGGNNEGSGAGSRRGLSGRANHVAPVTSPSSAAHASLPSAAGGGAAASSCRLMELDPADSPSPPRRPEADDGTDTVKLFGVALQGKKKKRAHQEDGDDGNHEQGSSDV* |
NA |
FALSE |
100 |
98.4 |
55 |
65.5 |
54.6 |
52.5 |
63.6 |
51.5 |
|||
gene8 |
gene8_1 |
GCTGAATATTTTTTTCTCTTTGGTTTGTTGCTGTTGTTGTTGTTGGCTGATGCAGGGCTTTCAGGAAGATAGTGGCGGACAGGTGGGA |
gene8 |
-1 |
1767 |
1854 |
() |
((1825, ‘C’, ‘CT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:C-CT |
1825 |
FALSE |
FALSE |
FALSE |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFQEDSGGQVGVRQRVLQEGRQAPTRRDPPEEVVAAAADADAAAPALPPPPPPSPPPPQPVLPAAAGTAGAVVPPPPLPRRAHRHRHRAARRCSSRRRRWRQQ* |
39.1 |
TRUE |
NA |
1.6 |
45 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
ref |
315 |
402 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
339 |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
NA |
FALSE |
100 |
100 |
49.3 |
55 |
53.7 |
54.2 |
29.6 |
38.5 |
|||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGACTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GA |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVTGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
5.6 |
8.9 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGCCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GC’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GC |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVPGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GT |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVSGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
50.7 |
45 |
NA |
NA |
56.5 |
1.1 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
1 |
315 |
402 |
() |
((339, ‘GC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1D:GC-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVWPSPRASSWAGPRPRPSRWRAPSR* |
34 |
TRUE |
NA |
NA |
NA |
NA |
46.3 |
NA |
2.3 |
2.4 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
2 |
315 |
402 |
() |
((339, ‘GCT’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:2D:GCT-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
NA |
NA |
NA |
45.8 |
2.5 |
1.9 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
2 |
315 |
402 |
() |
((339, ‘GC’, ‘G’), (341, ‘TG’, ‘T’)) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1D:GC-G,-4:1D:TG-T |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVCHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
42.1 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
3 |
315 |
402 |
() |
((337, ‘GTGC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
0:3D:GTGC-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
99.7 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
2.3 |
2.1 |
Haplotype |
Reference |
Locus |
target |
Expected cut site |
FILTER_gRNA |
atgCheck |
splicingSiteCheck |
protein_sequence |
pairwiseProteinIdentity (%) |
Effect |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1_1_ref |
gene1 |
gene1_1 |
gene1 |
1817 |
False |
MGSSYDPYPSPGADDLFLYLSDLGPASPSAYLDLPPTPQPQPYPQSQQQQQGSKGPTQDMLLPYISSMLMEDDIDDTFFYDYPDNPALLQAQQSFLDILSDDASSPTTTTGTTNSSASVNHSSSDASASAPPTPAAVDSYSPAPAVQFDGFDLDPAAFFSNGANSDLMSSAFLKGMEEANKFLPSQDKLVIDLDPPDDTKRFVLPTRAAENLAPGFNAAATTVPAAVAMAVKEEEVILAALDAALGSGGVVLGRGRRNRLDDDEEDLELQRRSTKQSALQGDGDERDVFEKYIMTCPETCTEQMQQLRIAMQEEAAKEAAVAAGNGKAKGRRGGREVVDLRTLLVHCAQAVASDDRRSATELLRQIKQHASPQGDATQRLAHCFAEGLQARLAGTGSMVYQSLMAKRTSAADILQAYQLYMAAICFKRVVFVFSNNTIYNAALGKMKIHIVDYGIHYGFQWPCFLRWIADREGGPPEVRITGIDLPQPGFRPTQRIEETGRRLSKYAQQFGVPFKYQAIAASKMESIRAEDLNLDPEEVLIVNCLYQFKNLMDESVVIESPRDIVLNNIRKMRPHTFIHAIVNGSFSAPFFVTRFREALFFYSALFDALDTTTPRDSNQRMLIEENLFGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKQQPLNPDVVQQDIGTSNQEEICDASMS* |
NA |
False |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
||
gene2_1_ref |
gene2 |
gene2_1 |
gene2 |
3795 |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
NA |
False |
100.0 |
100.0 |
48.2 |
NA |
57.2 |
100.0 |
45.9 |
100.0 |
||
gene2_1_-1:2D:ACT-A |
gene2 |
gene2_1 |
gene2 |
3795 |
True |
False |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITSGISQAGTICSCIGAPICQFREE* |
54.8 |
False |
NA |
NA |
51.8 |
45.0 |
NA |
NA |
NA |
NA |
gene2_1_-1:3D:ACTC-A |
gene2 |
gene2_1 |
gene2 |
3795 |
True |
False |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLIKVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
99.5 |
False |
NA |
NA |
NA |
55.0 |
42.8 |
NA |
54.1 |
NA |
gene3_1_ref |
gene3 |
gene3_1 |
gene3 |
3121 |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
NA |
False |
100.0 |
100.0 |
49.9 |
NA |
52.4 |
NA |
4.2 |
5.0 |
||
gene3_1_-1:1D:CG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
24.6 |
25.0 |
gene3_1_-1:1I:C-CG |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
False |
NA |
NA |
47.9 |
55.5 |
47.6 |
40.3 |
47.5 |
56.0 |
gene3_1_-1:2D:CGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.5 |
False |
NA |
NA |
2.2 |
NA |
NA |
59.7 |
4.2 |
2.0 |
gene3_1_-1:3D:CGGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
4.2 |
NA |
gene3_1_-1:5D:CGGGGT-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
NA |
gene3_1_-1:S:G-T |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYWVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
3.0 |
gene3_1_-2:10D:GGGGTGAAGTC-G |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYESLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.2 |
False |
NA |
NA |
NA |
NA |
47.6 |
NA |
NA |
NA |
gene3_1_-2:1I:G-GT |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
63.1 |
False |
NA |
NA |
NA |
44.5 |
NA |
NA |
7.6 |
9.0 |
gene3_1_1:8D:TACGGGGTG-T |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSA* |
63.3 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
2.5 |
NA |
gene3_1_3:8D:CCTACGGGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.3 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
3.5 |
NA |
gene4_1_ref |
gene4 |
gene4_1 |
gene4 |
861 |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
NA |
False |
100.0 |
100.0 |
48.3 |
64.8 |
100.0 |
100.0 |
53.6 |
41.9 |
||
gene4_1_1:1D:TG-T |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLSQVPARCRVCCRG* |
16.5 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.3 |
gene4_1_2:1I:G-GA |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGL* |
13.8 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.5 |
gene4_1_2:1I:G-GT |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCLRCQQDAGCVVEGEEALHSDAVDGAGAPGPDLQALRCECPCAVQLAPPYQKKPQSMEQPWLQLIGMGTISFRLC* |
23.6 |
True |
NA |
NA |
51.7 |
35.2 |
NA |
NA |
46.4 |
55.3 |
gene5_1_ref |
gene5 |
gene5_1 |
gene5 |
1212 |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
NA |
False |
100.0 |
100.0 |
38.3 |
45.4 |
43.7 |
42.8 |
4.5 |
2.2 |
||
gene5_1_-1:1D:AC-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHNPSCWTRYPAPRTRACSCWSSTASAA* |
53.9 |
False |
NA |
NA |
2.1 |
NA |
NA |
NA |
12.3 |
18.5 |
gene5_1_-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSCWTRYPAPRTRACSCWSSTASAA* |
53.3 |
False |
NA |
NA |
59.6 |
NA |
56.3 |
57.2 |
71.2 |
NA |
gene5_1_-1:5D:ACCAAT-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.1 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
1.2 |
gene5_1_-2:1I:C-CA |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHTIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
gene5_1_-2:1I:C-CT |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3.0 |
gene5_1_-2:2D:CCA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
6.0 |
4.3 |
gene5_1_-2:3D:CCAA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
False |
NA |
NA |
NA |
54.6 |
NA |
NA |
1.9 |
2.3 |
gene5_1_-2:4D:CCAAT-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPSCWTRYPAPRTRACSCWSSTASAA* |
53.6 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
21.3 |
gene5_1_2:3D:CCCA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
45.5 |
gene6_1_ref |
gene6 |
gene6_1 |
gene6 |
741 |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
NA |
False |
100.0 |
99.99999999999999 |
52.6 |
3.4 |
100.0 |
50.2 |
100.0 |
100.0 |
||
gene6_1_0:2D:TCA-T |
gene6 |
gene6_1 |
gene6 |
741 |
True |
False |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSGPVHFRWWVEGKEATGYGEGG* |
65.8 |
False |
NA |
NA |
47.4 |
96.6 |
NA |
49.8 |
NA |
NA |
gene7_1_ref |
gene7 |
gene7_1 |
gene7 |
339 |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARAVGWPPVRAYRRNALRDEARLVKVAVDGAPYLRKVDLAAHDGYAALLRALHGMFASCLVAGAGADGAGRIDTAAEYMPTYEDKDGDWMLVGDVPFKMFVDSCKRIRLMKSSEAVNLSPRTSSRQ* |
NA |
False |
100.0 |
100.0 |
41.8 |
53.1 |
49.2 |
51.1 |
44.0 |
44.4 |
||
gene7_1_-1:1D:CG-C |
gene7 |
gene7_1 |
gene7 |
339 |
True |
False |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARPWAGRRSARTGATRCATRPGS* |
43.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
54.6 |
NA |
gene7_1_2:1I:G-GA |
gene7 |
gene7_1 |
gene7 |
339 |
True |
False |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARDRGLAAGPRVPAQRAARRGQAREGGRGRRAVPAEGGPRGARRVRGPAPRAPRHVRLLPRCRSRSRRGGADRHRRRVHAHLRGQGRRLDARRRRPLQDVRGLVQEDPPHEELRGRQPISEDIIPAVIVVGVDAICPTRLISPN* |
49.0 |
True |
NA |
NA |
58.2 |
46.9 |
50.8 |
48.9 |
1.4 |
55.6 |
gene8_1_ref |
gene8 |
gene8_1 |
gene8 |
1825 |
False |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQPLPTPMPPHQPYHHHLHHLHHHLSPFSPPPLAQPVPSYHHHHFQEEPIATATAPHGGAQAGAAGGGNNEGSGAGSRRGLSGRANHVAPVTSPSSAAHASLPSAAGGGAAASSCRLMELDPADSPSPPRRPEADDGTDTVKLFGVALQGKKKKRAHQEDGDDGNHEQGSSDV* |
NA |
False |
100.0 |
98.4 |
55.0 |
65.5 |
54.6 |
52.5 |
63.6 |
51.5 |
||
gene8_1_2:1I:C-CT |
gene8 |
gene8_1 |
gene8 |
1825 |
True |
False |
False |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFQEDSGGQVGVRQRVLQEGRQAPTRRDPPEEVVAAAADADAAAPALPPPPPPSPPPPQPVLPAAAGTAGAVVPPPPLPRRAHRHRHRAARRCSSRRRRWRQQ* |
39.1 |
True |
NA |
1.6 |
45.0 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9_1_ref |
gene9 |
gene9_1 |
gene9 |
339 |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
NA |
False |
100.0 |
100.0 |
49.3 |
55.0 |
53.7 |
54.2 |
29.6 |
38.5 |
||
gene9_1_-2:1D:GC-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVWPSPRASSWAGPRPRPSRWRAPSR* |
34.0 |
True |
NA |
NA |
NA |
NA |
46.3 |
NA |
2.3 |
2.4 |
gene9_1_-2:1D:GC-G,-4:1D:TG-T |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVCHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
42.1 |
gene9_1_-2:1I:G-GA |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVTGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
5.6 |
8.9 |
gene9_1_-2:1I:G-GC |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVPGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3.0 |
gene9_1_-2:1I:G-GT |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVSGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
50.7 |
45.0 |
NA |
NA |
56.5 |
1.1 |
gene9_1_-2:2D:GCT-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
45.8 |
2.5 |
1.9 |
gene9_1_0:3D:GTGC-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
2.3 |
2.1 |
Reference |
Locus |
SNP |
INDEL |
Haplotype_Name |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
() |
() |
nan |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene2 |
gene2_1 |
() |
() |
nan |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene3 |
gene3_1 |
() |
() |
nan |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene4 |
gene4_1 |
nan |
(861, ‘G’, ‘GA’),(861, ‘G’, ‘GT’),(860, ‘TG’, ‘T’) |
2:1I:G-GA,2:1I:G-GT,1:1D:TG-T |
0.0 |
0.0 |
51.7 |
35.2 |
0.0 |
0.0 |
46.4 |
58.099999999999994 |
gene5 |
gene5_1 |
() |
() |
nan |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene6 |
gene6_1 |
() |
() |
nan |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene7 |
gene7_1 |
nan |
(339, ‘G’, ‘GA’),(336, ‘CG’, ‘C’) |
2:1I:G-GA,-1:1D:CG-C |
0.0 |
0.0 |
58.2 |
46.9 |
50.8 |
48.9 |
56.0 |
55.6 |
gene8 |
gene8_1 |
nan |
(1825, ‘C’, ‘CT’) |
2:1I:C-CT |
0.0 |
1.6 |
45.0 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9 |
gene9_1 |
nan |
(339, ‘G’, ‘GA’),(339, ‘G’, ‘GC’),(339, ‘G’, ‘GT’),(339, ‘GC’, ‘G’),(339, ‘GCT’, ‘G’),(339, ‘GC’, ‘G’),(341, ‘TG’, ‘T’) |
-2:1I:G-GA,-2:1I:G-GC,-2:1I:G-GT,-2:1D:GC-G,-2:2D:GCT-G,-2:1D:GC-G,-4:1D:TG-T |
0.0 |
0.0 |
50.7 |
45.0 |
46.3 |
45.8 |
68.1 |
59.400000000000006 |
Reference |
Locus |
SNP |
INDEL |
Haplotype_Name |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
() |
() |
nan |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
gene2 |
gene2_1 |
() |
() |
nan |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
gene3 |
gene3_1 |
() |
() |
nan |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
gene4 |
gene4_1 |
nan |
(861, ‘G’, ‘GA’),(861, ‘G’, ‘GT’),(860, ‘TG’, ‘T’) |
2:1I:G-GA,2:1I:G-GT,1:1D:TG-T |
0 |
0 |
1 |
1 |
0 |
0 |
1 |
1 |
gene5 |
gene5_1 |
() |
() |
nan |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
gene6 |
gene6_1 |
() |
() |
nan |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
gene7 |
gene7_1 |
nan |
(339, ‘G’, ‘GA’),(336, ‘CG’, ‘C’) |
2:1I:G-GA,-1:1D:CG-C |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
gene8 |
gene8_1 |
nan |
(1825, ‘C’, ‘CT’) |
2:1I:C-CT |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
gene9 |
gene9_1 |
nan |
(339, ‘G’, ‘GA’),(339, ‘G’, ‘GC’),(339, ‘G’, ‘GT’),(339, ‘GC’, ‘G’),(339, ‘GCT’, ‘G’),(339, ‘GC’, ‘G’),(341, ‘TG’, ‘T’) |
-2:1I:G-GA,-2:1I:G-GC,-2:1I:G-GT,-2:1D:GC-G,-2:2D:GCT-G,-2:1D:GC-G,-4:1D:TG-T |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
Command used to run SMAP effect-prediction on a
smap effect-prediction haplotype_frequency.tsv genome.fasta borders.gff -a gene_features.gff -u guides.gff -p CAS9 -s 5 -r 5 -t 70 -e dosage -i diploid
Reference |
Locus |
Haplotypes |
target |
edit |
start |
end |
SNP |
INDEL |
Alignment |
FILTER_gRNA_INDEL |
FILTER_gRNA_SNP |
FILTER_gRNA |
Haplotype_Name |
Expected cut site |
atgCheck |
splicingSiteCheck |
stopCodonCheck |
protein_sequence |
pairwiseProteinIdentity (%) |
Effect |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
GGCTCTGTTCTTTTACTCGGCCCTGTTTGACGCTCTGGACACGACCACTCCAAGAGACAGCAACCAGAGGATGCT |
gene1 |
ref |
1790 |
1865 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1817 |
MGSSYDPYPSPGADDLFLYLSDLGPASPSAYLDLPPTPQPQPYPQSQQQQQGSKGPTQDMLLPYISSMLMEDDIDDTFFYDYPDNPALLQAQQSFLDILSDDASSPTTTTGTTNSSASVNHSSSDASASAPPTPAAVDSYSPAPAVQFDGFDLDPAAFFSNGANSDLMSSAFLKGMEEANKFLPSQDKLVIDLDPPDDTKRFVLPTRAAENLAPGFNAAATTVPAAVAMAVKEEEVILAALDAALGSGGVVLGRGRRNRLDDDEEDLELQRRSTKQSALQGDGDERDVFEKYIMTCPETCTEQMQQLRIAMQEEAAKEAAVAAGNGKAKGRRGGREVVDLRTLLVHCAQAVASDDRRSATELLRQIKQHASPQGDATQRLAHCFAEGLQARLAGTGSMVYQSLMAKRTSAADILQAYQLYMAAICFKRVVFVFSNNTIYNAALGKMKIHIVDYGIHYGFQWPCFLRWIADREGGPPEVRITGIDLPQPGFRPTQRIEETGRRLSKYAQQFGVPFKYQAIAASKMESIRAEDLNLDPEEVLIVNCLYQFKNLMDESVVIESPRDIVLNNIRKMRPHTFIHAIVNGSFSAPFFVTRFREALFFYSALFDALDTTTPRDSNQRMLIEENLFGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKQQPLNPDVVQQDIGTSNQEEICDASMS* |
NA |
FALSE |
100 |
100 |
100 |
100 |
100 |
100 |
100 |
100 |
|||
gene2 |
gene2_1 |
AGTGCTAGGTGATGCTGCGCGAGTACTGCGAGATCTAATCACTCAAGTGGAATCTCTCAGGCAGGAACAATCTGCTCTTG |
gene2 |
ref |
3751 |
3831 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
3795 |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
NA |
FALSE |
49.5 |
52.8 |
NA |
NA |
57.2 |
52.3 |
45.9 |
50.1 |
|||
gene2 |
gene2_1 |
AGTGCTAGGTGTTGCTGCGCGAGTACTGCGAGATCTAATCACTCAAGTGGAATCTCTCAGGCAGGAGCAATCTGCTCTTG |
gene2 |
0 |
3751 |
3831 |
((3762, ‘A’, ‘T’), (3817, ‘A’, ‘G’)) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-31:S:A-T,24:S:A-G |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
100 |
FALSE |
50.5 |
47.2 |
48.2 |
NA |
NA |
47.7 |
NA |
49.9 |
gene2 |
gene2_1 |
AGTGCTAGGTGATGCTGCGCGAGTACTGCGAGATCTAATCACAAGTGGAATCTCTCAGGCAGGAACAATCTGCTCTTG |
gene2 |
2 |
3751 |
3831 |
() |
((3792, ‘ACT’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:2D:ACT-A |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITSGISQAGTICSCIGAPICQFREE* |
54.8 |
TRUE |
NA |
NA |
51.8 |
45 |
NA |
NA |
NA |
NA |
gene2 |
gene2_1 |
AGTGCTAGGTGTTGCTGCGCGAGTACTGCGAGATCTAATCAAAGTGGAATCTCTCAGGCAGGAGCAATCTGCTCTTG |
gene2 |
3 |
3751 |
3831 |
((3762, ‘A’, ‘T’), (3817, ‘A’, ‘G’)) |
((3792, ‘ACTC’, ‘A’),) |
(data not shown) |
TRUE |
FALSE |
TRUE |
-1:3D:ACTC-A,-31:S:A-T,24:S:A-G |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLIKVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
99.5 |
FALSE |
NA |
NA |
NA |
55 |
42.8 |
NA |
54.1 |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
ref |
3078 |
3157 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
3121 |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
NA |
FALSE |
100 |
97 |
44.3 |
NA |
48 |
NA |
4.2 |
5 |
|||
gene3 |
gene3_1 |
CTGACGTGCTCACGTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3091, ‘T’, ‘G’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
28:S:T-G |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
NA |
3 |
NA |
NA |
NA |
NA |
NA |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACATCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3148, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-29:S:G-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
NA |
NA |
5.6 |
NA |
NA |
NA |
NA |
NA |
gene3 |
gene3_1 |
CTGACGTACTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3085, ‘G’, ‘A’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
34:S:G-A |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
NA |
NA |
NA |
NA |
4.4 |
NA |
NA |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
-1 |
3078 |
3157 |
() |
((3120, ‘C’, ‘CG’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1I:C-CG |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
TRUE |
NA |
NA |
47.9 |
55.5 |
47.6 |
40.3 |
47.5 |
56 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
-1 |
3078 |
3157 |
() |
((3121, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GT |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
63.1 |
TRUE |
NA |
NA |
NA |
44.5 |
NA |
NA |
7.6 |
9 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACTGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3120, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
TRUE |
TRUE |
-1:S:G-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYWVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
3 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
1 |
3078 |
3157 |
() |
((3120, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1D:CG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
24.6 |
22 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGTGAAGTCTCTGTCGGACGAGCCCAGCCAGCTCT |
gene3 |
1 |
3078 |
3157 |
((3145, ‘A’, ‘C’),) |
((3120, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
FALSE |
TRUE |
-1:1D:CG-C,-26:S:A-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
3 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
2 |
3078 |
3157 |
() |
((3120, ‘CGG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:2D:CGG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.5 |
TRUE |
NA |
NA |
2.2 |
NA |
NA |
59.7 |
4.2 |
2 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
3 |
3078 |
3157 |
() |
((3120, ‘CGGG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:3D:CGGG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
4.2 |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
5 |
3078 |
3157 |
() |
((3120, ‘CGGGGT’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:5D:CGGGGT-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
8 |
3078 |
3157 |
() |
((3118, ‘TACGGGGTG’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:8D:TACGGGGTG-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSA* |
63.3 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
2.5 |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
10 |
3078 |
3157 |
() |
((3121, ‘GGGGTGAAGTC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:10D:GGGGTGAAGTC-G |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYESLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.2 |
FALSE |
NA |
NA |
NA |
NA |
47.6 |
NA |
NA |
NA |
gene3 |
gene3_1 |
CTGACGTTGCTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
36 |
3078 |
3157 |
() |
((3085, ‘TGCTCACTTGCTGACATACCTAGGTACTC’, ‘T’), (3116, ‘CCTACGGGG’, ‘C’)) |
(data not shown) |
TRUE |
nan |
TRUE |
34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,3:8D:CCTACGGGG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.3 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
3.5 |
NA |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
ref |
827 |
905 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
861 |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
NA |
FALSE |
100 |
98.8 |
48.3 |
64.8 |
98.4 |
98.7 |
53.6 |
41.9 |
|||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGAGAACCT |
gene4 |
-6 |
827 |
905 |
() |
((78, ‘A——’, ‘AGAACCT’),) |
(data not shown) |
FALSE |
nan |
FALSE |
-781:0I:A——-AGAACCT |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
100 |
FALSE |
NA |
1.2 |
NA |
NA |
1.6 |
1.3 |
NA |
NA |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGACTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
-1 |
827 |
905 |
() |
((861, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GA |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGL* |
13.8 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.5 |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGTCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
-1 |
827 |
905 |
() |
((861, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GT |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCLRCQQDAGCVVEGEEALHSDAVDGAGAPGPDLQALRCECPCAVQLAPPYQKKPQSMEQPWLQLIGMGTISFRLC* |
23.6 |
TRUE |
NA |
NA |
51.7 |
35.2 |
NA |
NA |
46.4 |
55.3 |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
1 |
827 |
905 |
() |
((860, ‘TG’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:1D:TG-T |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLSQVPARCRVCCRG* |
16.5 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
ref |
1190 |
1272 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1212 |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
NA |
FALSE |
100 |
100 |
38.3 |
45.4 |
43.7 |
42.8 |
4.5 |
2.2 |
|||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACACAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
-1 |
1190 |
1272 |
() |
((1212, ‘C’, ‘CA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:C-CA |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHTIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACTCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
-1 |
1190 |
1272 |
() |
((1212, ‘C’, ‘CT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:C-CT |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
1 |
1190 |
1272 |
() |
((1211, ‘AC’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1D:AC-A |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHNPSCWTRYPAPRTRACSCWSSTASAA* |
53.9 |
TRUE |
NA |
NA |
2.1 |
NA |
NA |
NA |
12.3 |
18.5 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
2 |
1190 |
1272 |
() |
((1212, ‘CCA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:2D:CCA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
6 |
4.3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
3 |
1190 |
1272 |
() |
((1208, ‘CCCA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:3D:CCCA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
45.5 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACTCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
3 |
1190 |
1272 |
() |
((1212, ‘CCAA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:3D:CCAA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
FALSE |
NA |
NA |
NA |
54.6 |
NA |
NA |
1.9 |
2.3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
4 |
1190 |
1272 |
() |
((1212, ‘CCAAT’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:4D:CCAAT-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPSCWTRYPAPRTRACSCWSSTASAA* |
53.6 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
21.3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
5 |
1190 |
1272 |
() |
((1211, ‘ACCAAT’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:5D:ACCAAT-A |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.1 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
1.2 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
21 |
1190 |
1272 |
() |
((1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSCWTRYPAPRTRACSCWSSTASAA* |
53.3 |
TRUE |
NA |
NA |
59.6 |
NA |
56.3 |
57.2 |
71.2 |
NA |
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
ref |
704 |
781 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
741 |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
NA |
FALSE |
100 |
96.7 |
52.6 |
NA |
100 |
50.2 |
100 |
100 |
|||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGCCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((745, ‘T’, ‘C’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-6:S:T-C |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPAPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
99.7 |
FALSE |
NA |
1.1 |
NA |
NA |
NA |
NA |
NA |
NA |
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCATACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((749, ‘G’, ‘A’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-10:S:G-A |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
100 |
FALSE |
NA |
1.1 |
NA |
NA |
NA |
NA |
NA |
NA |
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCGTACATTTTCTGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((759, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-20:S:G-T |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
100 |
FALSE |
NA |
1.1 |
NA |
3.4 |
NA |
NA |
NA |
NA |
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCCGGTCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
2 |
704 |
781 |
() |
((739, ‘TCA’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
0:2D:TCA-T |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSGPVHFRWWVEGKEATGYGEGG* |
65.8 |
TRUE |
NA |
NA |
47.4 |
96.6 |
NA |
49.8 |
NA |
NA |
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGGCCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
ref |
304 |
390 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
339 |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARAVGWPPVRAYRRNALRDEARLVKVAVDGAPYLRKVDLAAHDGYAALLRALHGMFASCLVAGAGADGAGRIDTAAEYMPTYEDKDGDWMLVGDVPFKMFVDSCKRIRLMKSSEAVNLSPRTSSRQ* |
NA |
FALSE |
100 |
100 |
41.8 |
53.1 |
49.2 |
51.1 |
44 |
44.4 |
|||
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGGACCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
-1 |
304 |
390 |
() |
((339, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GA |
339 |
FALSE |
FALSE |
FALSE |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARDRGLAAGPRVPAQRAARRGQAREGGRGRRAVPAEGGPRGARRVRGPAPRAPRHVRLLPRCRSRSRRGGADRHRRRVHAHLRGQGRRLDARRRRPLQDVRGLVQEDPPHEELRGRQPISEDIIPAVIVVGVDAICPTRLISPN* |
49 |
TRUE |
NA |
NA |
58.2 |
46.9 |
50.8 |
48.9 |
1.4 |
55.6 |
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGCCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
1 |
304 |
390 |
() |
((336, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1D:CG-C |
339 |
FALSE |
FALSE |
FALSE |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARPWAGRRSARTGATRCATRPGS* |
43.4 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
54.6 |
NA |
gene8 |
gene8_1 |
GCTGAATATTTTTTTCTCTTTGGTTTGTTGCTGTTGTTGTTGTTGGCTGATGCAGGGCTTCAGGAAGATAGTGGCGGACAGGTGGGA |
gene8 |
ref |
1767 |
1854 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1825 |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQPLPTPMPPHQPYHHHLHHLHHHLSPFSPPPLAQPVPSYHHHHFQEEPIATATAPHGGAQAGAAGGGNNEGSGAGSRRGLSGRANHVAPVTSPSSAAHASLPSAAGGGAAASSCRLMELDPADSPSPPRRPEADDGTDTVKLFGVALQGKKKKRAHQEDGDDGNHEQGSSDV* |
NA |
FALSE |
100 |
98.4 |
55 |
65.5 |
54.6 |
52.5 |
63.6 |
51.5 |
|||
gene8 |
gene8_1 |
GCTGAATATTTTTTTCTCTTTGGTTTGTTGCTGTTGTTGTTGTTGGCTGATGCAGGGCTTTCAGGAAGATAGTGGCGGACAGGTGGGA |
gene8 |
-1 |
1767 |
1854 |
() |
((1825, ‘C’, ‘CT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:C-CT |
1825 |
FALSE |
FALSE |
FALSE |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFQEDSGGQVGVRQRVLQEGRQAPTRRDPPEEVVAAAADADAAAPALPPPPPPSPPPPQPVLPAAAGTAGAVVPPPPLPRRAHRHRHRAARRCSSRRRRWRQQ* |
39.1 |
TRUE |
NA |
1.6 |
45 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
ref |
315 |
402 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
339 |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
NA |
FALSE |
100 |
100 |
49.3 |
55 |
53.7 |
54.2 |
29.6 |
38.5 |
|||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGACTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GA |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVTGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
5.6 |
8.9 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGCCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GC’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GC |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVPGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GT |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVSGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
50.7 |
45 |
NA |
NA |
56.5 |
1.1 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
1 |
315 |
402 |
() |
((339, ‘GC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1D:GC-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVWPSPRASSWAGPRPRPSRWRAPSR* |
34 |
TRUE |
NA |
NA |
NA |
NA |
46.3 |
NA |
2.3 |
2.4 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
2 |
315 |
402 |
() |
((339, ‘GCT’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:2D:GCT-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
NA |
NA |
NA |
45.8 |
2.5 |
1.9 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
2 |
315 |
402 |
() |
((339, ‘GC’, ‘G’), (341, ‘TG’, ‘T’)) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1D:GC-G,-4:1D:TG-T |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVCHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
42.1 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
3 |
315 |
402 |
() |
((337, ‘GTGC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
0:3D:GTGC-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
99.7 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
2.3 |
2.1 |
Haplotype |
Reference |
Locus |
target |
Expected cut site |
FILTER_gRNA |
atgCheck |
splicingSiteCheck |
protein_sequence |
pairwiseProteinIdentity (%) |
Effect |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1_1_ref |
gene1 |
gene1_1 |
gene1 |
1817 |
False |
MGSSYDPYPSPGADDLFLYLSDLGPASPSAYLDLPPTPQPQPYPQSQQQQQGSKGPTQDMLLPYISSMLMEDDIDDTFFYDYPDNPALLQAQQSFLDILSDDASSPTTTTGTTNSSASVNHSSSDASASAPPTPAAVDSYSPAPAVQFDGFDLDPAAFFSNGANSDLMSSAFLKGMEEANKFLPSQDKLVIDLDPPDDTKRFVLPTRAAENLAPGFNAAATTVPAAVAMAVKEEEVILAALDAALGSGGVVLGRGRRNRLDDDEEDLELQRRSTKQSALQGDGDERDVFEKYIMTCPETCTEQMQQLRIAMQEEAAKEAAVAAGNGKAKGRRGGREVVDLRTLLVHCAQAVASDDRRSATELLRQIKQHASPQGDATQRLAHCFAEGLQARLAGTGSMVYQSLMAKRTSAADILQAYQLYMAAICFKRVVFVFSNNTIYNAALGKMKIHIVDYGIHYGFQWPCFLRWIADREGGPPEVRITGIDLPQPGFRPTQRIEETGRRLSKYAQQFGVPFKYQAIAASKMESIRAEDLNLDPEEVLIVNCLYQFKNLMDESVVIESPRDIVLNNIRKMRPHTFIHAIVNGSFSAPFFVTRFREALFFYSALFDALDTTTPRDSNQRMLIEENLFGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKQQPLNPDVVQQDIGTSNQEEICDASMS* |
NA |
False |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
||
gene2_1_ref |
gene2 |
gene2_1 |
gene2 |
3795 |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
NA |
False |
100.0 |
100.0 |
48.2 |
NA |
57.2 |
100.0 |
45.9 |
100.0 |
||
gene2_1_-1:2D:ACT-A |
gene2 |
gene2_1 |
gene2 |
3795 |
True |
False |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITSGISQAGTICSCIGAPICQFREE* |
54.8 |
True |
NA |
NA |
51.8 |
45.0 |
NA |
NA |
NA |
NA |
gene2_1_-1:3D:ACTC-A |
gene2 |
gene2_1 |
gene2 |
3795 |
True |
False |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLIKVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
99.5 |
False |
NA |
NA |
NA |
55.0 |
42.8 |
NA |
54.1 |
NA |
gene3_1_ref |
gene3 |
gene3_1 |
gene3 |
3121 |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
NA |
False |
100.0 |
100.0 |
49.9 |
NA |
52.4 |
NA |
4.2 |
5.0 |
||
gene3_1_-1:1D:CG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
24.6 |
25.0 |
gene3_1_-1:1I:C-CG |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
True |
NA |
NA |
47.9 |
55.5 |
47.6 |
40.3 |
47.5 |
56.0 |
gene3_1_-1:2D:CGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.5 |
True |
NA |
NA |
2.2 |
NA |
NA |
59.7 |
4.2 |
2.0 |
gene3_1_-1:3D:CGGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
4.2 |
NA |
gene3_1_-1:5D:CGGGGT-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
NA |
gene3_1_-1:S:G-T |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYWVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
3.0 |
gene3_1_-2:10D:GGGGTGAAGTC-G |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYESLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.2 |
False |
NA |
NA |
NA |
NA |
47.6 |
NA |
NA |
NA |
gene3_1_-2:1I:G-GT |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
63.1 |
True |
NA |
NA |
NA |
44.5 |
NA |
NA |
7.6 |
9.0 |
gene3_1_1:8D:TACGGGGTG-T |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSA* |
63.3 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
2.5 |
NA |
gene3_1_3:8D:CCTACGGGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.3 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
3.5 |
NA |
gene4_1_ref |
gene4 |
gene4_1 |
gene4 |
861 |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
NA |
False |
100.0 |
100.0 |
48.3 |
64.8 |
100.0 |
100.0 |
53.6 |
41.9 |
||
gene4_1_1:1D:TG-T |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLSQVPARCRVCCRG* |
16.5 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.3 |
gene4_1_2:1I:G-GA |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGL* |
13.8 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.5 |
gene4_1_2:1I:G-GT |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCLRCQQDAGCVVEGEEALHSDAVDGAGAPGPDLQALRCECPCAVQLAPPYQKKPQSMEQPWLQLIGMGTISFRLC* |
23.6 |
True |
NA |
NA |
51.7 |
35.2 |
NA |
NA |
46.4 |
55.3 |
gene5_1_ref |
gene5 |
gene5_1 |
gene5 |
1212 |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
NA |
False |
100.0 |
100.0 |
38.3 |
45.4 |
43.7 |
42.8 |
4.5 |
2.2 |
||
gene5_1_-1:1D:AC-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHNPSCWTRYPAPRTRACSCWSSTASAA* |
53.9 |
True |
NA |
NA |
2.1 |
NA |
NA |
NA |
12.3 |
18.5 |
gene5_1_-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSCWTRYPAPRTRACSCWSSTASAA* |
53.3 |
True |
NA |
NA |
59.6 |
NA |
56.3 |
57.2 |
71.2 |
NA |
gene5_1_-1:5D:ACCAAT-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.1 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
1.2 |
gene5_1_-2:1I:C-CA |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHTIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
gene5_1_-2:1I:C-CT |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3.0 |
gene5_1_-2:2D:CCA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
6.0 |
4.3 |
gene5_1_-2:3D:CCAA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
False |
NA |
NA |
NA |
54.6 |
NA |
NA |
1.9 |
2.3 |
gene5_1_-2:4D:CCAAT-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPSCWTRYPAPRTRACSCWSSTASAA* |
53.6 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
21.3 |
gene5_1_2:3D:CCCA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
45.5 |
gene6_1_ref |
gene6 |
gene6_1 |
gene6 |
741 |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
NA |
False |
100.0 |
99.99999999999999 |
52.6 |
3.4 |
100.0 |
50.2 |
100.0 |
100.0 |
||
gene6_1_0:2D:TCA-T |
gene6 |
gene6_1 |
gene6 |
741 |
True |
False |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSGPVHFRWWVEGKEATGYGEGG* |
65.8 |
True |
NA |
NA |
47.4 |
96.6 |
NA |
49.8 |
NA |
NA |
gene7_1_ref |
gene7 |
gene7_1 |
gene7 |
339 |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARAVGWPPVRAYRRNALRDEARLVKVAVDGAPYLRKVDLAAHDGYAALLRALHGMFASCLVAGAGADGAGRIDTAAEYMPTYEDKDGDWMLVGDVPFKMFVDSCKRIRLMKSSEAVNLSPRTSSRQ* |
NA |
False |
100.0 |
100.0 |
41.8 |
53.1 |
49.2 |
51.1 |
44.0 |
44.4 |
||
gene7_1_-1:1D:CG-C |
gene7 |
gene7_1 |
gene7 |
339 |
True |
False |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARPWAGRRSARTGATRCATRPGS* |
43.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
54.6 |
NA |
gene7_1_2:1I:G-GA |
gene7 |
gene7_1 |
gene7 |
339 |
True |
False |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARDRGLAAGPRVPAQRAARRGQAREGGRGRRAVPAEGGPRGARRVRGPAPRAPRHVRLLPRCRSRSRRGGADRHRRRVHAHLRGQGRRLDARRRRPLQDVRGLVQEDPPHEELRGRQPISEDIIPAVIVVGVDAICPTRLISPN* |
49.0 |
True |
NA |
NA |
58.2 |
46.9 |
50.8 |
48.9 |
1.4 |
55.6 |
gene8_1_ref |
gene8 |
gene8_1 |
gene8 |
1825 |
False |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQPLPTPMPPHQPYHHHLHHLHHHLSPFSPPPLAQPVPSYHHHHFQEEPIATATAPHGGAQAGAAGGGNNEGSGAGSRRGLSGRANHVAPVTSPSSAAHASLPSAAGGGAAASSCRLMELDPADSPSPPRRPEADDGTDTVKLFGVALQGKKKKRAHQEDGDDGNHEQGSSDV* |
NA |
False |
100.0 |
98.4 |
55.0 |
65.5 |
54.6 |
52.5 |
63.6 |
51.5 |
||
gene8_1_2:1I:C-CT |
gene8 |
gene8_1 |
gene8 |
1825 |
True |
False |
False |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFQEDSGGQVGVRQRVLQEGRQAPTRRDPPEEVVAAAADADAAAPALPPPPPPSPPPPQPVLPAAAGTAGAVVPPPPLPRRAHRHRHRAARRCSSRRRRWRQQ* |
39.1 |
True |
NA |
1.6 |
45.0 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9_1_ref |
gene9 |
gene9_1 |
gene9 |
339 |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
NA |
False |
100.0 |
100.0 |
49.3 |
55.0 |
53.7 |
54.2 |
29.6 |
38.5 |
||
gene9_1_-2:1D:GC-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVWPSPRASSWAGPRPRPSRWRAPSR* |
34.0 |
True |
NA |
NA |
NA |
NA |
46.3 |
NA |
2.3 |
2.4 |
gene9_1_-2:1D:GC-G,-4:1D:TG-T |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVCHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
42.1 |
gene9_1_-2:1I:G-GA |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVTGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
5.6 |
8.9 |
gene9_1_-2:1I:G-GC |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVPGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3.0 |
gene9_1_-2:1I:G-GT |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVSGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
50.7 |
45.0 |
NA |
NA |
56.5 |
1.1 |
gene9_1_-2:2D:GCT-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
45.8 |
2.5 |
1.9 |
gene9_1_0:3D:GTGC-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
2.3 |
2.1 |
Reference |
Locus |
SNP |
INDEL |
Haplotype_Name |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
() |
() |
nan |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene2 |
gene2_1 |
nan |
(3792, ‘ACT’, ‘A’) |
-1:2D:ACT-A |
0.0 |
0.0 |
51.8 |
45.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene3 |
gene3_1 |
(3145, ‘A’, ‘C’) |
(3120, ‘C’, ‘CG’),(3121, ‘G’, ‘GT’),(3120, ‘CG’, ‘C’),(3120, ‘CG’, ‘C’),(3120, ‘CGG’, ‘C’),(3120, ‘CGGGGT’, ‘C’),(3118, ‘TACGGGGTG’, ‘T’),(3085, ‘TGCTCACTTGCTGACATACCTAGGTACTC’, ‘T’),(3116, ‘CCTACGGGG’, ‘C’) |
-1:1I:C-CG,-2:1I:G-GT,-1:1D:CG-C,-1:1D:CG-C,-26:S:A-C,-1:2D:CGG-C,-1:5D:CGGGGT-C,1:8D:TACGGGGTG-T,34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,3:8D:CCTACGGGG-C |
0.0 |
0.0 |
50.1 |
100.0 |
47.6 |
100.0 |
91.60000000000001 |
92.0 |
gene4 |
gene4_1 |
nan |
(861, ‘G’, ‘GA’),(861, ‘G’, ‘GT’),(860, ‘TG’, ‘T’) |
2:1I:G-GA,2:1I:G-GT,1:1D:TG-T |
0.0 |
0.0 |
51.7 |
35.2 |
0.0 |
0.0 |
46.4 |
58.099999999999994 |
gene5 |
gene5_1 |
nan |
(1212, ‘C’, ‘CA’),(1212, ‘C’, ‘CT’),(1211, ‘AC’, ‘A’),(1212, ‘CCA’, ‘C’),(1212, ‘CCAAT’, ‘C’),(1211, ‘ACCAAT’, ‘A’),(1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’) |
-2:1I:C-CA,-2:1I:C-CT,-1:1D:AC-A,-2:2D:CCA-C,-2:4D:CCAAT-C,-1:5D:ACCAAT-A,-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
0.0 |
0.0 |
61.7 |
0.0 |
56.3 |
57.2 |
91.9 |
50.0 |
gene6 |
gene6_1 |
nan |
(739, ‘TCA’, ‘T’) |
0:2D:TCA-T |
0.0 |
0.0 |
47.4 |
96.6 |
0.0 |
49.8 |
0.0 |
0.0 |
gene7 |
gene7_1 |
nan |
(339, ‘G’, ‘GA’),(336, ‘CG’, ‘C’) |
2:1I:G-GA,-1:1D:CG-C |
0.0 |
0.0 |
58.2 |
46.9 |
50.8 |
48.9 |
56.0 |
55.6 |
gene8 |
gene8_1 |
nan |
(1825, ‘C’, ‘CT’) |
2:1I:C-CT |
0.0 |
1.6 |
45.0 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9 |
gene9_1 |
nan |
(339, ‘G’, ‘GA’),(339, ‘G’, ‘GC’),(339, ‘G’, ‘GT’),(339, ‘GC’, ‘G’),(339, ‘GCT’, ‘G’),(339, ‘GC’, ‘G’),(341, ‘TG’, ‘T’) |
-2:1I:G-GA,-2:1I:G-GC,-2:1I:G-GT,-2:1D:GC-G,-2:2D:GCT-G,-2:1D:GC-G,-4:1D:TG-T |
0.0 |
0.0 |
50.7 |
45.0 |
46.3 |
45.8 |
68.1 |
59.400000000000006 |
Reference |
Locus |
SNP |
INDEL |
Haplotype_Name |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
() |
() |
nan |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
gene2 |
gene2_1 |
nan |
(3792, ‘ACT’, ‘A’) |
-1:2D:ACT-A |
0 |
0 |
1 |
1 |
0 |
0 |
0 |
0 |
gene3 |
gene3_1 |
(3145, ‘A’, ‘C’) |
(3120, ‘C’, ‘CG’),(3121, ‘G’, ‘GT’),(3120, ‘CG’, ‘C’),(3120, ‘CG’, ‘C’),(3120, ‘CGG’, ‘C’),(3120, ‘CGGGGT’, ‘C’),(3118, ‘TACGGGGTG’, ‘T’),(3085, ‘TGCTCACTTGCTGACATACCTAGGTACTC’, ‘T’),(3116, ‘CCTACGGGG’, ‘C’) |
-1:1I:C-CG,-2:1I:G-GT,-1:1D:CG-C,-1:1D:CG-C,-26:S:A-C,-1:2D:CGG-C,-1:5D:CGGGGT-C,1:8D:TACGGGGTG-T,34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,3:8D:CCTACGGGG-C |
0 |
0 |
1 |
2 |
1 |
2 |
2 |
2 |
gene4 |
gene4_1 |
nan |
(861, ‘G’, ‘GA’),(861, ‘G’, ‘GT’),(860, ‘TG’, ‘T’) |
2:1I:G-GA,2:1I:G-GT,1:1D:TG-T |
0 |
0 |
1 |
1 |
0 |
0 |
1 |
1 |
gene5 |
gene5_1 |
nan |
(1212, ‘C’, ‘CA’),(1212, ‘C’, ‘CT’),(1211, ‘AC’, ‘A’),(1212, ‘CCA’, ‘C’),(1212, ‘CCAAT’, ‘C’),(1211, ‘ACCAAT’, ‘A’),(1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’) |
-2:1I:C-CA,-2:1I:C-CT,-1:1D:AC-A,-2:2D:CCA-C,-2:4D:CCAAT-C,-1:5D:ACCAAT-A,-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
0 |
0 |
1 |
0 |
1 |
1 |
2 |
1 |
gene6 |
gene6_1 |
nan |
(739, ‘TCA’, ‘T’) |
0:2D:TCA-T |
0 |
0 |
1 |
2 |
0 |
1 |
0 |
0 |
gene7 |
gene7_1 |
nan |
(339, ‘G’, ‘GA’),(336, ‘CG’, ‘C’) |
2:1I:G-GA,-1:1D:CG-C |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
gene8 |
gene8_1 |
nan |
(1825, ‘C’, ‘CT’) |
2:1I:C-CT |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
gene9 |
gene9_1 |
nan |
(339, ‘G’, ‘GA’),(339, ‘G’, ‘GC’),(339, ‘G’, ‘GT’),(339, ‘GC’, ‘G’),(339, ‘GCT’, ‘G’),(339, ‘GC’, ‘G’),(341, ‘TG’, ‘T’) |
-2:1I:G-GA,-2:1I:G-GC,-2:1I:G-GT,-2:1D:GC-G,-2:2D:GCT-G,-2:1D:GC-G,-4:1D:TG-T |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
Command used to run SMAP effect-prediction on a
smap effect-prediction haplotype_frequency.tsv genome.fasta borders.gff -a gene_features.gff -u guides.gff -p CAS9 -s 5 -r 5 -t 99 -e dosage -i diploid
Reference |
Locus |
Haplotypes |
target |
edit |
start |
end |
SNP |
INDEL |
Alignment |
FILTER_gRNA_INDEL |
FILTER_gRNA_SNP |
FILTER_gRNA |
Haplotype_Name |
Expected cut site |
atgCheck |
splicingSiteCheck |
stopCodonCheck |
protein_sequence |
pairwiseProteinIdentity (%) |
Effect |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
GGCTCTGTTCTTTTACTCGGCCCTGTTTGACGCTCTGGACACGACCACTCCAAGAGACAGCAACCAGAGGATGCT |
gene1 |
ref |
1790 |
1865 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1817 |
MGSSYDPYPSPGADDLFLYLSDLGPASPSAYLDLPPTPQPQPYPQSQQQQQGSKGPTQDMLLPYISSMLMEDDIDDTFFYDYPDNPALLQAQQSFLDILSDDASSPTTTTGTTNSSASVNHSSSDASASAPPTPAAVDSYSPAPAVQFDGFDLDPAAFFSNGANSDLMSSAFLKGMEEANKFLPSQDKLVIDLDPPDDTKRFVLPTRAAENLAPGFNAAATTVPAAVAMAVKEEEVILAALDAALGSGGVVLGRGRRNRLDDDEEDLELQRRSTKQSALQGDGDERDVFEKYIMTCPETCTEQMQQLRIAMQEEAAKEAAVAAGNGKAKGRRGGREVVDLRTLLVHCAQAVASDDRRSATELLRQIKQHASPQGDATQRLAHCFAEGLQARLAGTGSMVYQSLMAKRTSAADILQAYQLYMAAICFKRVVFVFSNNTIYNAALGKMKIHIVDYGIHYGFQWPCFLRWIADREGGPPEVRITGIDLPQPGFRPTQRIEETGRRLSKYAQQFGVPFKYQAIAASKMESIRAEDLNLDPEEVLIVNCLYQFKNLMDESVVIESPRDIVLNNIRKMRPHTFIHAIVNGSFSAPFFVTRFREALFFYSALFDALDTTTPRDSNQRMLIEENLFGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKQQPLNPDVVQQDIGTSNQEEICDASMS* |
NA |
FALSE |
100 |
100 |
100 |
100 |
100 |
100 |
100 |
100 |
|||
gene2 |
gene2_1 |
AGTGCTAGGTGATGCTGCGCGAGTACTGCGAGATCTAATCACTCAAGTGGAATCTCTCAGGCAGGAACAATCTGCTCTTG |
gene2 |
ref |
3751 |
3831 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
3795 |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
NA |
FALSE |
49.5 |
52.8 |
NA |
NA |
57.2 |
52.3 |
45.9 |
50.1 |
|||
gene2 |
gene2_1 |
AGTGCTAGGTGTTGCTGCGCGAGTACTGCGAGATCTAATCACTCAAGTGGAATCTCTCAGGCAGGAGCAATCTGCTCTTG |
gene2 |
0 |
3751 |
3831 |
((3762, ‘A’, ‘T’), (3817, ‘A’, ‘G’)) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-31:S:A-T,24:S:A-G |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
100 |
FALSE |
50.5 |
47.2 |
48.2 |
NA |
NA |
47.7 |
NA |
49.9 |
gene2 |
gene2_1 |
AGTGCTAGGTGATGCTGCGCGAGTACTGCGAGATCTAATCACAAGTGGAATCTCTCAGGCAGGAACAATCTGCTCTTG |
gene2 |
2 |
3751 |
3831 |
() |
((3792, ‘ACT’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:2D:ACT-A |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITSGISQAGTICSCIGAPICQFREE* |
54.8 |
TRUE |
NA |
NA |
51.8 |
45 |
NA |
NA |
NA |
NA |
gene2 |
gene2_1 |
AGTGCTAGGTGTTGCTGCGCGAGTACTGCGAGATCTAATCAAAGTGGAATCTCTCAGGCAGGAGCAATCTGCTCTTG |
gene2 |
3 |
3751 |
3831 |
((3762, ‘A’, ‘T’), (3817, ‘A’, ‘G’)) |
((3792, ‘ACTC’, ‘A’),) |
(data not shown) |
TRUE |
FALSE |
TRUE |
-1:3D:ACTC-A,-31:S:A-T,24:S:A-G |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLIKVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
99.5 |
FALSE |
NA |
NA |
NA |
55 |
42.8 |
NA |
54.1 |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
ref |
3078 |
3157 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
3121 |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
NA |
FALSE |
100 |
97 |
44.3 |
NA |
48 |
NA |
4.2 |
5 |
|||
gene3 |
gene3_1 |
CTGACGTGCTCACGTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3091, ‘T’, ‘G’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
28:S:T-G |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
NA |
3 |
NA |
NA |
NA |
NA |
NA |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACATCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3148, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-29:S:G-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
NA |
NA |
5.6 |
NA |
NA |
NA |
NA |
NA |
gene3 |
gene3_1 |
CTGACGTACTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3085, ‘G’, ‘A’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
34:S:G-A |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
NA |
NA |
NA |
NA |
4.4 |
NA |
NA |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
-1 |
3078 |
3157 |
() |
((3120, ‘C’, ‘CG’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1I:C-CG |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
TRUE |
NA |
NA |
47.9 |
55.5 |
47.6 |
40.3 |
47.5 |
56 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
-1 |
3078 |
3157 |
() |
((3121, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GT |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
63.1 |
TRUE |
NA |
NA |
NA |
44.5 |
NA |
NA |
7.6 |
9 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACTGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3120, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
TRUE |
TRUE |
-1:S:G-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYWVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
3 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
1 |
3078 |
3157 |
() |
((3120, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1D:CG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
24.6 |
22 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGTGAAGTCTCTGTCGGACGAGCCCAGCCAGCTCT |
gene3 |
1 |
3078 |
3157 |
((3145, ‘A’, ‘C’),) |
((3120, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
FALSE |
TRUE |
-1:1D:CG-C,-26:S:A-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
3 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
2 |
3078 |
3157 |
() |
((3120, ‘CGG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:2D:CGG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.5 |
TRUE |
NA |
NA |
2.2 |
NA |
NA |
59.7 |
4.2 |
2 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
3 |
3078 |
3157 |
() |
((3120, ‘CGGG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:3D:CGGG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
4.2 |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
5 |
3078 |
3157 |
() |
((3120, ‘CGGGGT’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:5D:CGGGGT-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
8 |
3078 |
3157 |
() |
((3118, ‘TACGGGGTG’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:8D:TACGGGGTG-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSA* |
63.3 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
2.5 |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
10 |
3078 |
3157 |
() |
((3121, ‘GGGGTGAAGTC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:10D:GGGGTGAAGTC-G |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYESLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.2 |
FALSE |
NA |
NA |
NA |
NA |
47.6 |
NA |
NA |
NA |
gene3 |
gene3_1 |
CTGACGTTGCTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
36 |
3078 |
3157 |
() |
((3085, ‘TGCTCACTTGCTGACATACCTAGGTACTC’, ‘T’), (3116, ‘CCTACGGGG’, ‘C’)) |
(data not shown) |
TRUE |
nan |
TRUE |
34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,3:8D:CCTACGGGG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.3 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
3.5 |
NA |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
ref |
827 |
905 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
861 |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
NA |
FALSE |
100 |
98.8 |
48.3 |
64.8 |
98.4 |
98.7 |
53.6 |
41.9 |
|||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGAGAACCT |
gene4 |
-6 |
827 |
905 |
() |
((78, ‘A——’, ‘AGAACCT’),) |
(data not shown) |
FALSE |
nan |
FALSE |
-781:0I:A——-AGAACCT |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
100 |
FALSE |
NA |
1.2 |
NA |
NA |
1.6 |
1.3 |
NA |
NA |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGACTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
-1 |
827 |
905 |
() |
((861, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GA |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGL* |
13.8 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.5 |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGTCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
-1 |
827 |
905 |
() |
((861, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GT |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCLRCQQDAGCVVEGEEALHSDAVDGAGAPGPDLQALRCECPCAVQLAPPYQKKPQSMEQPWLQLIGMGTISFRLC* |
23.6 |
TRUE |
NA |
NA |
51.7 |
35.2 |
NA |
NA |
46.4 |
55.3 |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
1 |
827 |
905 |
() |
((860, ‘TG’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:1D:TG-T |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLSQVPARCRVCCRG* |
16.5 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
ref |
1190 |
1272 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1212 |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
NA |
FALSE |
100 |
100 |
38.3 |
45.4 |
43.7 |
42.8 |
4.5 |
2.2 |
|||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACACAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
-1 |
1190 |
1272 |
() |
((1212, ‘C’, ‘CA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:C-CA |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHTIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACTCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
-1 |
1190 |
1272 |
() |
((1212, ‘C’, ‘CT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:C-CT |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
1 |
1190 |
1272 |
() |
((1211, ‘AC’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1D:AC-A |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHNPSCWTRYPAPRTRACSCWSSTASAA* |
53.9 |
TRUE |
NA |
NA |
2.1 |
NA |
NA |
NA |
12.3 |
18.5 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
2 |
1190 |
1272 |
() |
((1212, ‘CCA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:2D:CCA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
6 |
4.3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
3 |
1190 |
1272 |
() |
((1208, ‘CCCA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:3D:CCCA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
45.5 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACTCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
3 |
1190 |
1272 |
() |
((1212, ‘CCAA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:3D:CCAA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
FALSE |
NA |
NA |
NA |
54.6 |
NA |
NA |
1.9 |
2.3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
4 |
1190 |
1272 |
() |
((1212, ‘CCAAT’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:4D:CCAAT-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPSCWTRYPAPRTRACSCWSSTASAA* |
53.6 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
21.3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
5 |
1190 |
1272 |
() |
((1211, ‘ACCAAT’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:5D:ACCAAT-A |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.1 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
1.2 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
21 |
1190 |
1272 |
() |
((1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSCWTRYPAPRTRACSCWSSTASAA* |
53.3 |
TRUE |
NA |
NA |
59.6 |
NA |
56.3 |
57.2 |
71.2 |
NA |
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
ref |
704 |
781 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
741 |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
NA |
FALSE |
100 |
96.7 |
52.6 |
NA |
100 |
50.2 |
100 |
100 |
|||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGCCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((745, ‘T’, ‘C’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-6:S:T-C |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPAPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
99.7 |
FALSE |
NA |
1.1 |
NA |
NA |
NA |
NA |
NA |
NA |
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCATACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((749, ‘G’, ‘A’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-10:S:G-A |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
100 |
FALSE |
NA |
1.1 |
NA |
NA |
NA |
NA |
NA |
NA |
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCGTACATTTTCTGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((759, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-20:S:G-T |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
100 |
FALSE |
NA |
1.1 |
NA |
3.4 |
NA |
NA |
NA |
NA |
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCCGGTCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
2 |
704 |
781 |
() |
((739, ‘TCA’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
0:2D:TCA-T |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSGPVHFRWWVEGKEATGYGEGG* |
65.8 |
TRUE |
NA |
NA |
47.4 |
96.6 |
NA |
49.8 |
NA |
NA |
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGGCCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
ref |
304 |
390 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
339 |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARAVGWPPVRAYRRNALRDEARLVKVAVDGAPYLRKVDLAAHDGYAALLRALHGMFASCLVAGAGADGAGRIDTAAEYMPTYEDKDGDWMLVGDVPFKMFVDSCKRIRLMKSSEAVNLSPRTSSRQ* |
NA |
FALSE |
100 |
100 |
41.8 |
53.1 |
49.2 |
51.1 |
44 |
44.4 |
|||
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGGACCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
-1 |
304 |
390 |
() |
((339, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GA |
339 |
FALSE |
FALSE |
FALSE |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARDRGLAAGPRVPAQRAARRGQAREGGRGRRAVPAEGGPRGARRVRGPAPRAPRHVRLLPRCRSRSRRGGADRHRRRVHAHLRGQGRRLDARRRRPLQDVRGLVQEDPPHEELRGRQPISEDIIPAVIVVGVDAICPTRLISPN* |
49 |
TRUE |
NA |
NA |
58.2 |
46.9 |
50.8 |
48.9 |
1.4 |
55.6 |
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGCCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
1 |
304 |
390 |
() |
((336, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1D:CG-C |
339 |
FALSE |
FALSE |
FALSE |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARPWAGRRSARTGATRCATRPGS* |
43.4 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
54.6 |
NA |
gene8 |
gene8_1 |
GCTGAATATTTTTTTCTCTTTGGTTTGTTGCTGTTGTTGTTGTTGGCTGATGCAGGGCTTCAGGAAGATAGTGGCGGACAGGTGGGA |
gene8 |
ref |
1767 |
1854 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1825 |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQPLPTPMPPHQPYHHHLHHLHHHLSPFSPPPLAQPVPSYHHHHFQEEPIATATAPHGGAQAGAAGGGNNEGSGAGSRRGLSGRANHVAPVTSPSSAAHASLPSAAGGGAAASSCRLMELDPADSPSPPRRPEADDGTDTVKLFGVALQGKKKKRAHQEDGDDGNHEQGSSDV* |
NA |
FALSE |
100 |
98.4 |
55 |
65.5 |
54.6 |
52.5 |
63.6 |
51.5 |
|||
gene8 |
gene8_1 |
GCTGAATATTTTTTTCTCTTTGGTTTGTTGCTGTTGTTGTTGTTGGCTGATGCAGGGCTTTCAGGAAGATAGTGGCGGACAGGTGGGA |
gene8 |
-1 |
1767 |
1854 |
() |
((1825, ‘C’, ‘CT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:C-CT |
1825 |
FALSE |
FALSE |
FALSE |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFQEDSGGQVGVRQRVLQEGRQAPTRRDPPEEVVAAAADADAAAPALPPPPPPSPPPPQPVLPAAAGTAGAVVPPPPLPRRAHRHRHRAARRCSSRRRRWRQQ* |
39.1 |
TRUE |
NA |
1.6 |
45 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
ref |
315 |
402 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
339 |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
NA |
FALSE |
100 |
100 |
49.3 |
55 |
53.7 |
54.2 |
29.6 |
38.5 |
|||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGACTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GA |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVTGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
5.6 |
8.9 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGCCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GC’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GC |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVPGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1I:G-GT |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVSGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
50.7 |
45 |
NA |
NA |
56.5 |
1.1 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
1 |
315 |
402 |
() |
((339, ‘GC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1D:GC-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVWPSPRASSWAGPRPRPSRWRAPSR* |
34 |
TRUE |
NA |
NA |
NA |
NA |
46.3 |
NA |
2.3 |
2.4 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
2 |
315 |
402 |
() |
((339, ‘GCT’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:2D:GCT-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
NA |
NA |
NA |
45.8 |
2.5 |
1.9 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
2 |
315 |
402 |
() |
((339, ‘GC’, ‘G’), (341, ‘TG’, ‘T’)) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:1D:GC-G,-4:1D:TG-T |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVCHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
42.1 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
3 |
315 |
402 |
() |
((337, ‘GTGC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
0:3D:GTGC-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
99.7 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
2.3 |
2.1 |
Haplotype |
Reference |
Locus |
target |
Expected cut site |
FILTER_gRNA |
atgCheck |
splicingSiteCheck |
protein_sequence |
pairwiseProteinIdentity (%) |
Effect |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1_1_ref |
gene1 |
gene1_1 |
gene1 |
1817 |
False |
MGSSYDPYPSPGADDLFLYLSDLGPASPSAYLDLPPTPQPQPYPQSQQQQQGSKGPTQDMLLPYISSMLMEDDIDDTFFYDYPDNPALLQAQQSFLDILSDDASSPTTTTGTTNSSASVNHSSSDASASAPPTPAAVDSYSPAPAVQFDGFDLDPAAFFSNGANSDLMSSAFLKGMEEANKFLPSQDKLVIDLDPPDDTKRFVLPTRAAENLAPGFNAAATTVPAAVAMAVKEEEVILAALDAALGSGGVVLGRGRRNRLDDDEEDLELQRRSTKQSALQGDGDERDVFEKYIMTCPETCTEQMQQLRIAMQEEAAKEAAVAAGNGKAKGRRGGREVVDLRTLLVHCAQAVASDDRRSATELLRQIKQHASPQGDATQRLAHCFAEGLQARLAGTGSMVYQSLMAKRTSAADILQAYQLYMAAICFKRVVFVFSNNTIYNAALGKMKIHIVDYGIHYGFQWPCFLRWIADREGGPPEVRITGIDLPQPGFRPTQRIEETGRRLSKYAQQFGVPFKYQAIAASKMESIRAEDLNLDPEEVLIVNCLYQFKNLMDESVVIESPRDIVLNNIRKMRPHTFIHAIVNGSFSAPFFVTRFREALFFYSALFDALDTTTPRDSNQRMLIEENLFGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKQQPLNPDVVQQDIGTSNQEEICDASMS* |
NA |
False |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
||
gene2_1_ref |
gene2 |
gene2_1 |
gene2 |
3795 |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
NA |
False |
100.0 |
100.0 |
48.2 |
NA |
57.2 |
100.0 |
45.9 |
100.0 |
||
gene2_1_-1:2D:ACT-A |
gene2 |
gene2_1 |
gene2 |
3795 |
True |
False |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITSGISQAGTICSCIGAPICQFREE* |
54.8 |
True |
NA |
NA |
51.8 |
45.0 |
NA |
NA |
NA |
NA |
gene2_1_-1:3D:ACTC-A |
gene2 |
gene2_1 |
gene2 |
3795 |
True |
False |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLIKVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
99.5 |
False |
NA |
NA |
NA |
55.0 |
42.8 |
NA |
54.1 |
NA |
gene3_1_ref |
gene3 |
gene3_1 |
gene3 |
3121 |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
NA |
False |
100.0 |
100.0 |
49.9 |
NA |
52.4 |
NA |
4.2 |
5.0 |
||
gene3_1_-1:1D:CG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
24.6 |
25.0 |
gene3_1_-1:1I:C-CG |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
True |
NA |
NA |
47.9 |
55.5 |
47.6 |
40.3 |
47.5 |
56.0 |
gene3_1_-1:2D:CGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.5 |
True |
NA |
NA |
2.2 |
NA |
NA |
59.7 |
4.2 |
2.0 |
gene3_1_-1:3D:CGGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
4.2 |
NA |
gene3_1_-1:5D:CGGGGT-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
NA |
gene3_1_-1:S:G-T |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYWVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
3.0 |
gene3_1_-2:10D:GGGGTGAAGTC-G |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYESLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.2 |
False |
NA |
NA |
NA |
NA |
47.6 |
NA |
NA |
NA |
gene3_1_-2:1I:G-GT |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
63.1 |
True |
NA |
NA |
NA |
44.5 |
NA |
NA |
7.6 |
9.0 |
gene3_1_1:8D:TACGGGGTG-T |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSA* |
63.3 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
2.5 |
NA |
gene3_1_3:8D:CCTACGGGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.3 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
3.5 |
NA |
gene4_1_ref |
gene4 |
gene4_1 |
gene4 |
861 |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
NA |
False |
100.0 |
100.0 |
48.3 |
64.8 |
100.0 |
100.0 |
53.6 |
41.9 |
||
gene4_1_1:1D:TG-T |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLSQVPARCRVCCRG* |
16.5 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.3 |
gene4_1_2:1I:G-GA |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGL* |
13.8 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.5 |
gene4_1_2:1I:G-GT |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCLRCQQDAGCVVEGEEALHSDAVDGAGAPGPDLQALRCECPCAVQLAPPYQKKPQSMEQPWLQLIGMGTISFRLC* |
23.6 |
True |
NA |
NA |
51.7 |
35.2 |
NA |
NA |
46.4 |
55.3 |
gene5_1_ref |
gene5 |
gene5_1 |
gene5 |
1212 |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
NA |
False |
100.0 |
100.0 |
38.3 |
45.4 |
43.7 |
42.8 |
4.5 |
2.2 |
||
gene5_1_-1:1D:AC-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHNPSCWTRYPAPRTRACSCWSSTASAA* |
53.9 |
True |
NA |
NA |
2.1 |
NA |
NA |
NA |
12.3 |
18.5 |
gene5_1_-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSCWTRYPAPRTRACSCWSSTASAA* |
53.3 |
True |
NA |
NA |
59.6 |
NA |
56.3 |
57.2 |
71.2 |
NA |
gene5_1_-1:5D:ACCAAT-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.1 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
1.2 |
gene5_1_-2:1I:C-CA |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHTIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
gene5_1_-2:1I:C-CT |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3.0 |
gene5_1_-2:2D:CCA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
6.0 |
4.3 |
gene5_1_-2:3D:CCAA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
False |
NA |
NA |
NA |
54.6 |
NA |
NA |
1.9 |
2.3 |
gene5_1_-2:4D:CCAAT-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPSCWTRYPAPRTRACSCWSSTASAA* |
53.6 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
21.3 |
gene5_1_2:3D:CCCA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
45.5 |
gene6_1_ref |
gene6 |
gene6_1 |
gene6 |
741 |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
NA |
False |
100.0 |
99.99999999999999 |
52.6 |
3.4 |
100.0 |
50.2 |
100.0 |
100.0 |
||
gene6_1_0:2D:TCA-T |
gene6 |
gene6_1 |
gene6 |
741 |
True |
False |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSGPVHFRWWVEGKEATGYGEGG* |
65.8 |
True |
NA |
NA |
47.4 |
96.6 |
NA |
49.8 |
NA |
NA |
gene7_1_ref |
gene7 |
gene7_1 |
gene7 |
339 |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARAVGWPPVRAYRRNALRDEARLVKVAVDGAPYLRKVDLAAHDGYAALLRALHGMFASCLVAGAGADGAGRIDTAAEYMPTYEDKDGDWMLVGDVPFKMFVDSCKRIRLMKSSEAVNLSPRTSSRQ* |
NA |
False |
100.0 |
100.0 |
41.8 |
53.1 |
49.2 |
51.1 |
44.0 |
44.4 |
||
gene7_1_-1:1D:CG-C |
gene7 |
gene7_1 |
gene7 |
339 |
True |
False |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARPWAGRRSARTGATRCATRPGS* |
43.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
54.6 |
NA |
gene7_1_2:1I:G-GA |
gene7 |
gene7_1 |
gene7 |
339 |
True |
False |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARDRGLAAGPRVPAQRAARRGQAREGGRGRRAVPAEGGPRGARRVRGPAPRAPRHVRLLPRCRSRSRRGGADRHRRRVHAHLRGQGRRLDARRRRPLQDVRGLVQEDPPHEELRGRQPISEDIIPAVIVVGVDAICPTRLISPN* |
49.0 |
True |
NA |
NA |
58.2 |
46.9 |
50.8 |
48.9 |
1.4 |
55.6 |
gene8_1_ref |
gene8 |
gene8_1 |
gene8 |
1825 |
False |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQPLPTPMPPHQPYHHHLHHLHHHLSPFSPPPLAQPVPSYHHHHFQEEPIATATAPHGGAQAGAAGGGNNEGSGAGSRRGLSGRANHVAPVTSPSSAAHASLPSAAGGGAAASSCRLMELDPADSPSPPRRPEADDGTDTVKLFGVALQGKKKKRAHQEDGDDGNHEQGSSDV* |
NA |
False |
100.0 |
98.4 |
55.0 |
65.5 |
54.6 |
52.5 |
63.6 |
51.5 |
||
gene8_1_2:1I:C-CT |
gene8 |
gene8_1 |
gene8 |
1825 |
True |
False |
False |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFQEDSGGQVGVRQRVLQEGRQAPTRRDPPEEVVAAAADADAAAPALPPPPPPSPPPPQPVLPAAAGTAGAVVPPPPLPRRAHRHRHRAARRCSSRRRRWRQQ* |
39.1 |
True |
NA |
1.6 |
45.0 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9_1_ref |
gene9 |
gene9_1 |
gene9 |
339 |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
NA |
False |
100.0 |
100.0 |
49.3 |
55.0 |
53.7 |
54.2 |
29.6 |
38.5 |
||
gene9_1_-2:1D:GC-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVWPSPRASSWAGPRPRPSRWRAPSR* |
34.0 |
True |
NA |
NA |
NA |
NA |
46.3 |
NA |
2.3 |
2.4 |
gene9_1_-2:1D:GC-G,-4:1D:TG-T |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVCHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
42.1 |
gene9_1_-2:1I:G-GA |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVTGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
5.6 |
8.9 |
gene9_1_-2:1I:G-GC |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVPGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3.0 |
gene9_1_-2:1I:G-GT |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVSGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
50.7 |
45.0 |
NA |
NA |
56.5 |
1.1 |
gene9_1_-2:2D:GCT-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
45.8 |
2.5 |
1.9 |
gene9_1_0:3D:GTGC-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
2.3 |
2.1 |
Reference |
Locus |
SNP |
INDEL |
Haplotype_Name |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
() |
() |
nan |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene2 |
gene2_1 |
nan |
(3792, ‘ACT’, ‘A’) |
-1:2D:ACT-A |
0.0 |
0.0 |
51.8 |
45.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene3 |
gene3_1 |
(3145, ‘A’, ‘C’) |
(3120, ‘C’, ‘CG’),(3121, ‘G’, ‘GT’),(3120, ‘CG’, ‘C’),(3120, ‘CG’, ‘C’),(3120, ‘CGG’, ‘C’),(3120, ‘CGGGGT’, ‘C’),(3118, ‘TACGGGGTG’, ‘T’),(3085, ‘TGCTCACTTGCTGACATACCTAGGTACTC’, ‘T’),(3116, ‘CCTACGGGG’, ‘C’) |
-1:1I:C-CG,-2:1I:G-GT,-1:1D:CG-C,-1:1D:CG-C,-26:S:A-C,-1:2D:CGG-C,-1:5D:CGGGGT-C,1:8D:TACGGGGTG-T,34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,3:8D:CCTACGGGG-C |
0.0 |
0.0 |
50.1 |
100.0 |
47.6 |
100.0 |
91.60000000000001 |
92.0 |
gene4 |
gene4_1 |
nan |
(861, ‘G’, ‘GA’),(861, ‘G’, ‘GT’),(860, ‘TG’, ‘T’) |
2:1I:G-GA,2:1I:G-GT,1:1D:TG-T |
0.0 |
0.0 |
51.7 |
35.2 |
0.0 |
0.0 |
46.4 |
58.099999999999994 |
gene5 |
gene5_1 |
nan |
(1212, ‘C’, ‘CA’),(1212, ‘C’, ‘CT’),(1211, ‘AC’, ‘A’),(1212, ‘CCA’, ‘C’),(1212, ‘CCAAT’, ‘C’),(1211, ‘ACCAAT’, ‘A’),(1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’) |
-2:1I:C-CA,-2:1I:C-CT,-1:1D:AC-A,-2:2D:CCA-C,-2:4D:CCAAT-C,-1:5D:ACCAAT-A,-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
0.0 |
0.0 |
61.7 |
0.0 |
56.3 |
57.2 |
91.9 |
50.0 |
gene6 |
gene6_1 |
nan |
(739, ‘TCA’, ‘T’) |
0:2D:TCA-T |
0.0 |
0.0 |
47.4 |
96.6 |
0.0 |
49.8 |
0.0 |
0.0 |
gene7 |
gene7_1 |
nan |
(339, ‘G’, ‘GA’),(336, ‘CG’, ‘C’) |
2:1I:G-GA,-1:1D:CG-C |
0.0 |
0.0 |
58.2 |
46.9 |
50.8 |
48.9 |
56.0 |
55.6 |
gene8 |
gene8_1 |
nan |
(1825, ‘C’, ‘CT’) |
2:1I:C-CT |
0.0 |
1.6 |
45.0 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9 |
gene9_1 |
nan |
(339, ‘G’, ‘GA’),(339, ‘G’, ‘GC’),(339, ‘G’, ‘GT’),(339, ‘GC’, ‘G’),(339, ‘GCT’, ‘G’),(339, ‘GC’, ‘G’),(341, ‘TG’, ‘T’) |
-2:1I:G-GA,-2:1I:G-GC,-2:1I:G-GT,-2:1D:GC-G,-2:2D:GCT-G,-2:1D:GC-G,-4:1D:TG-T |
0.0 |
0.0 |
50.7 |
45.0 |
46.3 |
45.8 |
68.1 |
59.400000000000006 |
Reference |
Locus |
SNP |
INDEL |
Haplotype_Name |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
() |
() |
nan |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
gene2 |
gene2_1 |
nan |
(3792, ‘ACT’, ‘A’) |
-1:2D:ACT-A |
0 |
0 |
1 |
1 |
0 |
0 |
0 |
0 |
gene3 |
gene3_1 |
(3145, ‘A’, ‘C’) |
(3120, ‘C’, ‘CG’),(3121, ‘G’, ‘GT’),(3120, ‘CG’, ‘C’),(3120, ‘CG’, ‘C’),(3120, ‘CGG’, ‘C’),(3120, ‘CGGGGT’, ‘C’),(3118, ‘TACGGGGTG’, ‘T’),(3085, ‘TGCTCACTTGCTGACATACCTAGGTACTC’, ‘T’),(3116, ‘CCTACGGGG’, ‘C’) |
-1:1I:C-CG,-2:1I:G-GT,-1:1D:CG-C,-1:1D:CG-C,-26:S:A-C,-1:2D:CGG-C,-1:5D:CGGGGT-C,1:8D:TACGGGGTG-T,34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,3:8D:CCTACGGGG-C |
0 |
0 |
1 |
2 |
1 |
2 |
2 |
2 |
gene4 |
gene4_1 |
nan |
(861, ‘G’, ‘GA’),(861, ‘G’, ‘GT’),(860, ‘TG’, ‘T’) |
2:1I:G-GA,2:1I:G-GT,1:1D:TG-T |
0 |
0 |
1 |
1 |
0 |
0 |
1 |
1 |
gene5 |
gene5_1 |
nan |
(1212, ‘C’, ‘CA’),(1212, ‘C’, ‘CT’),(1211, ‘AC’, ‘A’),(1212, ‘CCA’, ‘C’),(1212, ‘CCAAT’, ‘C’),(1211, ‘ACCAAT’, ‘A’),(1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’) |
-2:1I:C-CA,-2:1I:C-CT,-1:1D:AC-A,-2:2D:CCA-C,-2:4D:CCAAT-C,-1:5D:ACCAAT-A,-1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
0 |
0 |
1 |
0 |
1 |
1 |
2 |
1 |
gene6 |
gene6_1 |
nan |
(739, ‘TCA’, ‘T’) |
0:2D:TCA-T |
0 |
0 |
1 |
2 |
0 |
1 |
0 |
0 |
gene7 |
gene7_1 |
nan |
(339, ‘G’, ‘GA’),(336, ‘CG’, ‘C’) |
2:1I:G-GA,-1:1D:CG-C |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
gene8 |
gene8_1 |
nan |
(1825, ‘C’, ‘CT’) |
2:1I:C-CT |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
gene9 |
gene9_1 |
nan |
(339, ‘G’, ‘GA’),(339, ‘G’, ‘GC’),(339, ‘G’, ‘GT’),(339, ‘GC’, ‘G’),(339, ‘GCT’, ‘G’),(339, ‘GC’, ‘G’),(341, ‘TG’, ‘T’) |
-2:1I:G-GA,-2:1I:G-GC,-2:1I:G-GT,-2:1D:GC-G,-2:2D:GCT-G,-2:1D:GC-G,-4:1D:TG-T |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
Command used to run SMAP effect-prediction on a wide range ROI:
smap effect-prediction haplotype_frequency.tsv genome.fasta borders.gff -a gene_features.gff -u guides.gff -p CAS9 -s 15 -r 20 -t 99 -e dosage -i diploid -g
Reference |
Locus |
Haplotypes |
target |
edit |
start |
end |
SNP |
INDEL |
Alignment |
FILTER_gRNA_INDEL |
FILTER_gRNA_SNP |
FILTER_gRNA |
Haplotype_Name |
Expected cut site |
atgCheck |
splicingSiteCheck |
stopCodonCheck |
protein_sequence |
pairwiseProteinIdentity (%) |
Effect |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
GGCTCTGTTCTTTTACTCGGCCCTGTTTGACGCTCTGGACACGACCACTCCAAGAGACAGCAACCAGAGGATGCT |
gene1 |
ref |
1790 |
1865 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1817 |
MGSSYDPYPSPGADDLFLYLSDLGPASPSAYLDLPPTPQPQPYPQSQQQQQGSKGPTQDMLLPYISSMLMEDDIDDTFFYDYPDNPALLQAQQSFLDILSDDASSPTTTTGTTNSSASVNHSSSDASASAPPTPAAVDSYSPAPAVQFDGFDLDPAAFFSNGANSDLMSSAFLKGMEEANKFLPSQDKLVIDLDPPDDTKRFVLPTRAAENLAPGFNAAATTVPAAVAMAVKEEEVILAALDAALGSGGVVLGRGRRNRLDDDEEDLELQRRSTKQSALQGDGDERDVFEKYIMTCPETCTEQMQQLRIAMQEEAAKEAAVAAGNGKAKGRRGGREVVDLRTLLVHCAQAVASDDRRSATELLRQIKQHASPQGDATQRLAHCFAEGLQARLAGTGSMVYQSLMAKRTSAADILQAYQLYMAAICFKRVVFVFSNNTIYNAALGKMKIHIVDYGIHYGFQWPCFLRWIADREGGPPEVRITGIDLPQPGFRPTQRIEETGRRLSKYAQQFGVPFKYQAIAASKMESIRAEDLNLDPEEVLIVNCLYQFKNLMDESVVIESPRDIVLNNIRKMRPHTFIHAIVNGSFSAPFFVTRFREALFFYSALFDALDTTTPRDSNQRMLIEENLFGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKQQPLNPDVVQQDIGTSNQEEICDASMS* |
NA |
FALSE |
100 |
100 |
100 |
100 |
100 |
100 |
100 |
100 |
|||
gene2 |
gene2_1 |
AGTGCTAGGTGATGCTGCGCGAGTACTGCGAGATCTAATCACTCAAGTGGAATCTCTCAGGCAGGAACAATCTGCTCTTG |
gene2 |
ref |
3751 |
3831 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
3795 |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
NA |
FALSE |
49.5 |
52.8 |
NA |
NA |
57.2 |
52.3 |
45.9 |
50.1 |
|||
gene2 |
gene2_1 |
AGTGCTAGGTGTTGCTGCGCGAGTACTGCGAGATCTAATCACTCAAGTGGAATCTCTCAGGCAGGAGCAATCTGCTCTTG |
gene2 |
0 |
3751 |
3831 |
((3762, ‘A’, ‘T’), (3817, ‘A’, ‘G’)) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-31:S:A-T,24:S:A-G |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
100 |
FALSE |
50.5 |
47.2 |
48.2 |
NA |
NA |
47.7 |
NA |
49.9 |
gene2 |
gene2_1 |
AGTGCTAGGTGATGCTGCGCGAGTACTGCGAGATCTAATCACAAGTGGAATCTCTCAGGCAGGAACAATCTGCTCTTG |
gene2 |
2 |
3751 |
3831 |
() |
((3792, ‘ACT’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:2D:ACT-A |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITSGISQAGTICSCIGAPICQFREE* |
54.8 |
TRUE |
NA |
NA |
51.8 |
45 |
NA |
NA |
NA |
NA |
gene2 |
gene2_1 |
AGTGCTAGGTGTTGCTGCGCGAGTACTGCGAGATCTAATCAAAGTGGAATCTCTCAGGCAGGAGCAATCTGCTCTTG |
gene2 |
3 |
3751 |
3831 |
((3762, ‘A’, ‘T’), (3817, ‘A’, ‘G’)) |
((3792, ‘ACTC’, ‘A’),) |
(data not shown) |
TRUE |
FALSE |
TRUE |
-1:3D:ACTC-A,-31:S:A-T,24:S:A-G |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLIKVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
99.5 |
FALSE |
NA |
NA |
NA |
55 |
42.8 |
NA |
54.1 |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
ref |
3078 |
3157 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
3121 |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
NA |
FALSE |
100 |
97 |
44.3 |
NA |
48 |
NA |
4.2 |
5 |
|||
gene3 |
gene3_1 |
CTGACGTGCTCACGTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3091, ‘T’, ‘G’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-28:S:T-G |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
NA |
3 |
NA |
NA |
NA |
NA |
NA |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACATCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3148, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
29:S:G-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
NA |
NA |
5.6 |
NA |
NA |
NA |
NA |
NA |
gene3 |
gene3_1 |
CTGACGTACTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3085, ‘G’, ‘A’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-34:S:G-A |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
NA |
NA |
NA |
NA |
4.4 |
NA |
NA |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
-1 |
3078 |
3157 |
() |
((3120, ‘C’, ‘CG’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:1I:C-CG |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
TRUE |
NA |
NA |
47.9 |
55.5 |
47.6 |
40.3 |
47.5 |
56 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
-1 |
3078 |
3157 |
() |
((3121, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GT |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
63.1 |
TRUE |
NA |
NA |
NA |
44.5 |
NA |
NA |
7.6 |
9 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACTGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3120, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
TRUE |
TRUE |
1:S:G-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYWVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
3 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
1 |
3078 |
3157 |
() |
((3120, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:1D:CG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
24.6 |
22 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGTGAAGTCTCTGTCGGACGAGCCCAGCCAGCTCT |
gene3 |
1 |
3078 |
3157 |
((3145, ‘A’, ‘C’),) |
((3120, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
FALSE |
TRUE |
1:1D:CG-C,26:S:A-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
3 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
2 |
3078 |
3157 |
() |
((3120, ‘CGG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:2D:CGG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.5 |
TRUE |
NA |
NA |
2.2 |
NA |
NA |
59.7 |
4.2 |
2 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
3 |
3078 |
3157 |
() |
((3120, ‘CGGG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:3D:CGGG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
4.2 |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
5 |
3078 |
3157 |
() |
((3120, ‘CGGGGT’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:5D:CGGGGT-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
8 |
3078 |
3157 |
() |
((3118, ‘TACGGGGTG’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:8D:TACGGGGTG-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSA* |
63.3 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
2.5 |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
10 |
3078 |
3157 |
() |
((3121, ‘GGGGTGAAGTC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:10D:GGGGTGAAGTC-G |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVCRTSTASSCPAAAAWTRQWTTRGACCRPKPPPRSRPQATLCSAR* |
69.3 |
TRUE |
NA |
NA |
NA |
NA |
47.6 |
NA |
NA |
NA |
gene3 |
gene3_1 |
CTGACGTTGCTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
36 |
3078 |
3157 |
() |
((3085, ‘TGCTCACTTGCTGACATACCTAGGTACTC’, ‘T’), (3116, ‘CCTACGGGG’, ‘C’)) |
(data not shown) |
TRUE |
nan |
TRUE |
-34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,-3:8D:CCTACGGGG-C |
3121 |
FALSE |
TRUE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLX* |
62.2 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
3.5 |
NA |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
ref |
827 |
905 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
861 |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
NA |
FALSE |
100 |
98.8 |
48.3 |
64.8 |
98.4 |
98.7 |
53.6 |
41.9 |
|||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGAGAACCT |
gene4 |
-6 |
827 |
905 |
() |
((78, ‘A——’, ‘AGAACCT’),) |
(data not shown) |
FALSE |
nan |
FALSE |
-781:0I:A——-AGAACCT |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
100 |
FALSE |
NA |
1.2 |
NA |
NA |
1.6 |
1.3 |
NA |
NA |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGACTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
-1 |
827 |
905 |
() |
((861, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GA |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGL* |
13.8 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.5 |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGTCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
-1 |
827 |
905 |
() |
((861, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GT |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCLRCQQDAGCVVEGEEALHSDAVDGAGAPGPDLQALRCECPCAVQLAPPYQKKPQSMEQPWLQLIGMGTISFRLC* |
23.6 |
TRUE |
NA |
NA |
51.7 |
35.2 |
NA |
NA |
46.4 |
55.3 |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
1 |
827 |
905 |
() |
((860, ‘TG’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:1D:TG-T |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLSQVPARCRVCCRG* |
16.5 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
ref |
1190 |
1272 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1212 |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
NA |
FALSE |
100 |
100 |
38.3 |
45.4 |
43.7 |
42.8 |
4.5 |
2.2 |
|||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACACAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
-1 |
1190 |
1272 |
() |
((1212, ‘C’, ‘CA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:C-CA |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHTIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACTCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
-1 |
1190 |
1272 |
() |
((1212, ‘C’, ‘CT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:C-CT |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
1 |
1190 |
1272 |
() |
((1211, ‘AC’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:1D:AC-A |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHNPSCWTRYPAPRTRACSCWSSTASAA* |
53.9 |
TRUE |
NA |
NA |
2.1 |
NA |
NA |
NA |
12.3 |
18.5 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
2 |
1190 |
1272 |
() |
((1212, ‘CCA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:2D:CCA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
6 |
4.3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
3 |
1190 |
1272 |
() |
((1208, ‘CCCA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:3D:CCCA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
45.5 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACTCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
3 |
1190 |
1272 |
() |
((1212, ‘CCAA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:3D:CCAA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
FALSE |
NA |
NA |
NA |
54.6 |
NA |
NA |
1.9 |
2.3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
4 |
1190 |
1272 |
() |
((1212, ‘CCAAT’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:4D:CCAAT-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPSCWTRYPAPRTRACSCWSSTASAA* |
53.6 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
21.3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
5 |
1190 |
1272 |
() |
((1211, ‘ACCAAT’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:5D:ACCAAT-A |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.1 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
1.2 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
21 |
1190 |
1272 |
() |
((1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
1212 |
FALSE |
TRUE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPX* |
49.2 |
TRUE |
NA |
NA |
59.6 |
NA |
56.3 |
57.2 |
71.2 |
NA |
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
ref |
704 |
781 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
741 |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
NA |
FALSE |
100 |
96.7 |
52.6 |
NA |
100 |
50.2 |
100 |
100 |
|||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGCCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((745, ‘T’, ‘C’),) |
() |
(data not shown) |
nan |
TRUE |
TRUE |
6:S:T-C |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPAPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
99.7 |
FALSE |
NA |
1.1 |
NA |
NA |
NA |
NA |
NA |
NA |
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCATACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((749, ‘G’, ‘A’),) |
() |
(data not shown) |
nan |
TRUE |
TRUE |
10:S:G-A |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
100 |
FALSE |
NA |
1.1 |
NA |
NA |
NA |
NA |
NA |
NA |
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCGTACATTTTCTGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((759, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
20:S:G-T |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
100 |
FALSE |
NA |
1.1 |
NA |
3.4 |
NA |
NA |
NA |
NA |
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCCGGTCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
2 |
704 |
781 |
() |
((739, ‘TCA’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
0:2D:TCA-T |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSGPVHFRWWVEGKEATGYGEGG* |
65.8 |
TRUE |
NA |
NA |
47.4 |
96.6 |
NA |
49.8 |
NA |
NA |
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGGCCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
ref |
304 |
390 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
339 |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARAVGWPPVRAYRRNALRDEARLVKVAVDGAPYLRKVDLAAHDGYAALLRALHGMFASCLVAGAGADGAGRIDTAAEYMPTYEDKDGDWMLVGDVPFKMFVDSCKRIRLMKSSEAVNLSPRTSSRQ* |
NA |
FALSE |
100 |
100 |
41.8 |
53.1 |
49.2 |
51.1 |
44 |
44.4 |
|||
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGGACCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
-1 |
304 |
390 |
() |
((339, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GA |
339 |
FALSE |
FALSE |
FALSE |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARDRGLAAGPRVPAQRAARRGQAREGGRGRRAVPAEGGPRGARRVRGPAPRAPRHVRLLPRCRSRSRRGGADRHRRRVHAHLRGQGRRLDARRRRPLQDVRGLVQEDPPHEELRGRQPISEDIIPAVIVVGVDAICPTRLISPN* |
49 |
TRUE |
NA |
NA |
58.2 |
46.9 |
50.8 |
48.9 |
1.4 |
55.6 |
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGCCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
1 |
304 |
390 |
() |
((336, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1D:CG-C |
339 |
FALSE |
FALSE |
FALSE |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARPWAGRRSARTGATRCATRPGS* |
43.4 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
54.6 |
NA |
gene8 |
gene8_1 |
GCTGAATATTTTTTTCTCTTTGGTTTGTTGCTGTTGTTGTTGTTGGCTGATGCAGGGCTTCAGGAAGATAGTGGCGGACAGGTGGGA |
gene8 |
ref |
1767 |
1854 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1825 |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQPLPTPMPPHQPYHHHLHHLHHHLSPFSPPPLAQPVPSYHHHHFQEEPIATATAPHGGAQAGAAGGGNNEGSGAGSRRGLSGRANHVAPVTSPSSAAHASLPSAAGGGAAASSCRLMELDPADSPSPPRRPEADDGTDTVKLFGVALQGKKKKRAHQEDGDDGNHEQGSSDV* |
NA |
FALSE |
100 |
98.4 |
55 |
65.5 |
54.6 |
52.5 |
63.6 |
51.5 |
|||
gene8 |
gene8_1 |
GCTGAATATTTTTTTCTCTTTGGTTTGTTGCTGTTGTTGTTGTTGGCTGATGCAGGGCTTTCAGGAAGATAGTGGCGGACAGGTGGGA |
gene8 |
-1 |
1767 |
1854 |
() |
((1825, ‘C’, ‘CT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:C-CT |
1825 |
FALSE |
FALSE |
FALSE |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFQEDSGGQVGVRQRVLQEGRQAPTRRDPPEEVVAAAADADAAAPALPPPPPPSPPPPQPVLPAAAGTAGAVVPPPPLPRRAHRHRHRAARRCSSRRRRWRQQ* |
39.1 |
TRUE |
NA |
1.6 |
45 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
ref |
315 |
402 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
339 |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
NA |
FALSE |
100 |
100 |
49.3 |
55 |
53.7 |
54.2 |
29.6 |
38.5 |
|||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGACTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GA |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVTGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
5.6 |
8.9 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGCCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GC’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GC |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVPGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GT |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVSGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
50.7 |
45 |
NA |
NA |
56.5 |
1.1 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
1 |
315 |
402 |
() |
((339, ‘GC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1D:GC-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVWPSPRASSWAGPRPRPSRWRAPSR* |
34 |
TRUE |
NA |
NA |
NA |
NA |
46.3 |
NA |
2.3 |
2.4 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
2 |
315 |
402 |
() |
((339, ‘GCT’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:2D:GCT-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
NA |
NA |
NA |
45.8 |
2.5 |
1.9 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
2 |
315 |
402 |
() |
((339, ‘GC’, ‘G’), (341, ‘TG’, ‘T’)) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1D:GC-G,4:1D:TG-T |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVCHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
42.1 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
3 |
315 |
402 |
() |
((337, ‘GTGC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
0:3D:GTGC-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
99.7 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
2.3 |
2.1 |
Haplotype |
Reference |
Locus |
target |
Expected cut site |
FILTER_gRNA |
atgCheck |
splicingSiteCheck |
protein_sequence |
pairwiseProteinIdentity (%) |
Effect |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1_1_ref |
gene1 |
gene1_1 |
gene1 |
1817 |
False |
MGSSYDPYPSPGADDLFLYLSDLGPASPSAYLDLPPTPQPQPYPQSQQQQQGSKGPTQDMLLPYISSMLMEDDIDDTFFYDYPDNPALLQAQQSFLDILSDDASSPTTTTGTTNSSASVNHSSSDASASAPPTPAAVDSYSPAPAVQFDGFDLDPAAFFSNGANSDLMSSAFLKGMEEANKFLPSQDKLVIDLDPPDDTKRFVLPTRAAENLAPGFNAAATTVPAAVAMAVKEEEVILAALDAALGSGGVVLGRGRRNRLDDDEEDLELQRRSTKQSALQGDGDERDVFEKYIMTCPETCTEQMQQLRIAMQEEAAKEAAVAAGNGKAKGRRGGREVVDLRTLLVHCAQAVASDDRRSATELLRQIKQHASPQGDATQRLAHCFAEGLQARLAGTGSMVYQSLMAKRTSAADILQAYQLYMAAICFKRVVFVFSNNTIYNAALGKMKIHIVDYGIHYGFQWPCFLRWIADREGGPPEVRITGIDLPQPGFRPTQRIEETGRRLSKYAQQFGVPFKYQAIAASKMESIRAEDLNLDPEEVLIVNCLYQFKNLMDESVVIESPRDIVLNNIRKMRPHTFIHAIVNGSFSAPFFVTRFREALFFYSALFDALDTTTPRDSNQRMLIEENLFGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKQQPLNPDVVQQDIGTSNQEEICDASMS* |
NA |
False |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
||
gene2_1_ref |
gene2 |
gene2_1 |
gene2 |
3795 |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
NA |
False |
100.0 |
100.0 |
48.2 |
NA |
57.2 |
100.0 |
45.9 |
100.0 |
||
gene2_1_-1:2D:ACT-A |
gene2 |
gene2_1 |
gene2 |
3795 |
True |
False |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITSGISQAGTICSCIGAPICQFREE* |
54.8 |
True |
NA |
NA |
51.8 |
45.0 |
NA |
NA |
NA |
NA |
gene2_1_-1:3D:ACTC-A |
gene2 |
gene2_1 |
gene2 |
3795 |
True |
False |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLIKVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
99.5 |
False |
NA |
NA |
NA |
55.0 |
42.8 |
NA |
54.1 |
NA |
gene3_1_ref |
gene3 |
gene3_1 |
gene3 |
3121 |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
NA |
False |
100.0 |
100.0 |
49.9 |
NA |
52.4 |
NA |
4.2 |
5.0 |
||
gene3_1_-1:8D:TACGGGGTG-T |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSA* |
63.3 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
2.5 |
NA |
gene3_1_-3:8D:CCTACGGGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
True |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLX* |
62.2 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
3.5 |
NA |
gene3_1_1:1D:CG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
24.6 |
25.0 |
gene3_1_1:1I:C-CG |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
True |
NA |
NA |
47.9 |
55.5 |
47.6 |
40.3 |
47.5 |
56.0 |
gene3_1_1:2D:CGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.5 |
True |
NA |
NA |
2.2 |
NA |
NA |
59.7 |
4.2 |
2.0 |
gene3_1_1:3D:CGGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
4.2 |
NA |
gene3_1_1:5D:CGGGGT-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
NA |
gene3_1_1:S:G-T |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYWVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
3.0 |
gene3_1_2:10D:GGGGTGAAGTC-G |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVCRTSTASSCPAAAAWTRQWTTRGACCRPKPPPRSRPQATLCSAR* |
69.3 |
True |
NA |
NA |
NA |
NA |
47.6 |
NA |
NA |
NA |
gene3_1_2:1I:G-GT |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
63.1 |
True |
NA |
NA |
NA |
44.5 |
NA |
NA |
7.6 |
9.0 |
gene4_1_ref |
gene4 |
gene4_1 |
gene4 |
861 |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
NA |
False |
100.0 |
100.0 |
48.3 |
64.8 |
100.0 |
100.0 |
53.6 |
41.9 |
||
gene4_1_1:1D:TG-T |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLSQVPARCRVCCRG* |
16.5 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.3 |
gene4_1_2:1I:G-GA |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGL* |
13.8 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.5 |
gene4_1_2:1I:G-GT |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCLRCQQDAGCVVEGEEALHSDAVDGAGAPGPDLQALRCECPCAVQLAPPYQKKPQSMEQPWLQLIGMGTISFRLC* |
23.6 |
True |
NA |
NA |
51.7 |
35.2 |
NA |
NA |
46.4 |
55.3 |
gene5_1_ref |
gene5 |
gene5_1 |
gene5 |
1212 |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
NA |
False |
100.0 |
100.0 |
38.3 |
45.4 |
43.7 |
42.8 |
4.5 |
2.2 |
||
gene5_1_-2:3D:CCCA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
45.5 |
gene5_1_1:1D:AC-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHNPSCWTRYPAPRTRACSCWSSTASAA* |
53.9 |
True |
NA |
NA |
2.1 |
NA |
NA |
NA |
12.3 |
18.5 |
gene5_1_1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
True |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPX* |
49.2 |
True |
NA |
NA |
59.6 |
NA |
56.3 |
57.2 |
71.2 |
NA |
gene5_1_1:5D:ACCAAT-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.1 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
1.2 |
gene5_1_2:1I:C-CA |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHTIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
gene5_1_2:1I:C-CT |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3.0 |
gene5_1_2:2D:CCA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
6.0 |
4.3 |
gene5_1_2:3D:CCAA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
False |
NA |
NA |
NA |
54.6 |
NA |
NA |
1.9 |
2.3 |
gene5_1_2:4D:CCAAT-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPSCWTRYPAPRTRACSCWSSTASAA* |
53.6 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
21.3 |
gene6_1_ref |
gene6 |
gene6_1 |
gene6 |
741 |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
NA |
False |
100.0 |
97.8 |
52.6 |
3.4 |
100.0 |
50.2 |
100.0 |
100.0 |
||
gene6_1_0:2D:TCA-T |
gene6 |
gene6_1 |
gene6 |
741 |
True |
False |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSGPVHFRWWVEGKEATGYGEGG* |
65.8 |
True |
NA |
NA |
47.4 |
96.6 |
NA |
49.8 |
NA |
NA |
gene6_1_10:S:G-A |
gene6 |
gene6_1 |
gene6 |
741 |
True |
False |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
100.0 |
False |
NA |
1.1 |
NA |
NA |
NA |
NA |
NA |
NA |
gene6_1_6:S:T-C |
gene6 |
gene6_1 |
gene6 |
741 |
True |
False |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPAPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
99.7 |
False |
NA |
1.1 |
NA |
NA |
NA |
NA |
NA |
NA |
gene7_1_ref |
gene7 |
gene7_1 |
gene7 |
339 |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARAVGWPPVRAYRRNALRDEARLVKVAVDGAPYLRKVDLAAHDGYAALLRALHGMFASCLVAGAGADGAGRIDTAAEYMPTYEDKDGDWMLVGDVPFKMFVDSCKRIRLMKSSEAVNLSPRTSSRQ* |
NA |
False |
100.0 |
100.0 |
41.8 |
53.1 |
49.2 |
51.1 |
44.0 |
44.4 |
||
gene7_1_-1:1D:CG-C |
gene7 |
gene7_1 |
gene7 |
339 |
True |
False |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARPWAGRRSARTGATRCATRPGS* |
43.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
54.6 |
NA |
gene7_1_2:1I:G-GA |
gene7 |
gene7_1 |
gene7 |
339 |
True |
False |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARDRGLAAGPRVPAQRAARRGQAREGGRGRRAVPAEGGPRGARRVRGPAPRAPRHVRLLPRCRSRSRRGGADRHRRRVHAHLRGQGRRLDARRRRPLQDVRGLVQEDPPHEELRGRQPISEDIIPAVIVVGVDAICPTRLISPN* |
49.0 |
True |
NA |
NA |
58.2 |
46.9 |
50.8 |
48.9 |
1.4 |
55.6 |
gene8_1_ref |
gene8 |
gene8_1 |
gene8 |
1825 |
False |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQPLPTPMPPHQPYHHHLHHLHHHLSPFSPPPLAQPVPSYHHHHFQEEPIATATAPHGGAQAGAAGGGNNEGSGAGSRRGLSGRANHVAPVTSPSSAAHASLPSAAGGGAAASSCRLMELDPADSPSPPRRPEADDGTDTVKLFGVALQGKKKKRAHQEDGDDGNHEQGSSDV* |
NA |
False |
100.0 |
98.4 |
55.0 |
65.5 |
54.6 |
52.5 |
63.6 |
51.5 |
||
gene8_1_2:1I:C-CT |
gene8 |
gene8_1 |
gene8 |
1825 |
True |
False |
False |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFQEDSGGQVGVRQRVLQEGRQAPTRRDPPEEVVAAAADADAAAPALPPPPPPSPPPPQPVLPAAAGTAGAVVPPPPLPRRAHRHRHRAARRCSSRRRRWRQQ* |
39.1 |
True |
NA |
1.6 |
45.0 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9_1_ref |
gene9 |
gene9_1 |
gene9 |
339 |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
NA |
False |
100.0 |
100.0 |
49.3 |
55.0 |
53.7 |
54.2 |
29.6 |
38.5 |
||
gene9_1_0:3D:GTGC-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
2.3 |
2.1 |
gene9_1_2:1D:GC-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVWPSPRASSWAGPRPRPSRWRAPSR* |
34.0 |
True |
NA |
NA |
NA |
NA |
46.3 |
NA |
2.3 |
2.4 |
gene9_1_2:1D:GC-G,4:1D:TG-T |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVCHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
42.1 |
gene9_1_2:1I:G-GA |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVTGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
5.6 |
8.9 |
gene9_1_2:1I:G-GC |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVPGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3.0 |
gene9_1_2:1I:G-GT |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVSGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
50.7 |
45.0 |
NA |
NA |
56.5 |
1.1 |
gene9_1_2:2D:GCT-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
45.8 |
2.5 |
1.9 |
Reference |
Locus |
SNP |
INDEL |
Haplotype_Name |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
() |
() |
nan |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene2 |
gene2_1 |
nan |
(3792, ‘ACT’, ‘A’) |
-1:2D:ACT-A |
0.0 |
0.0 |
51.8 |
45.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene3 |
gene3_1 |
(3145, ‘A’, ‘C’) |
(3120, ‘C’, ‘CG’),(3121, ‘G’, ‘GT’),(3120, ‘CG’, ‘C’),(3120, ‘CG’, ‘C’),(3120, ‘CGG’, ‘C’),(3120, ‘CGGGGT’, ‘C’),(3118, ‘TACGGGGTG’, ‘T’),(3121, ‘GGGGTGAAGTC’, ‘G’),(3085, ‘TGCTCACTTGCTGACATACCTAGGTACTC’, ‘T’),(3116, ‘CCTACGGGG’, ‘C’) |
1:1I:C-CG,2:1I:G-GT,1:1D:CG-C,1:1D:CG-C,26:S:A-C,1:2D:CGG-C,1:5D:CGGGGT-C,-1:8D:TACGGGGTG-T,2:10D:GGGGTGAAGTC-G,-34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,-3:8D:CCTACGGGG-C |
0.0 |
0.0 |
50.1 |
100.0 |
95.2 |
100.0 |
91.60000000000001 |
92.0 |
gene4 |
gene4_1 |
nan |
(861, ‘G’, ‘GA’),(861, ‘G’, ‘GT’),(860, ‘TG’, ‘T’) |
2:1I:G-GA,2:1I:G-GT,1:1D:TG-T |
0.0 |
0.0 |
51.7 |
35.2 |
0.0 |
0.0 |
46.4 |
58.099999999999994 |
gene5 |
gene5_1 |
nan |
(1212, ‘C’, ‘CA’),(1212, ‘C’, ‘CT’),(1211, ‘AC’, ‘A’),(1212, ‘CCA’, ‘C’),(1212, ‘CCAAT’, ‘C’),(1211, ‘ACCAAT’, ‘A’),(1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’) |
2:1I:C-CA,2:1I:C-CT,1:1D:AC-A,2:2D:CCA-C,2:4D:CCAAT-C,1:5D:ACCAAT-A,1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
0.0 |
0.0 |
61.7 |
0.0 |
56.3 |
57.2 |
91.9 |
50.0 |
gene6 |
gene6_1 |
nan |
(739, ‘TCA’, ‘T’) |
0:2D:TCA-T |
0.0 |
0.0 |
47.4 |
96.6 |
0.0 |
49.8 |
0.0 |
0.0 |
gene7 |
gene7_1 |
nan |
(339, ‘G’, ‘GA’),(336, ‘CG’, ‘C’) |
2:1I:G-GA,-1:1D:CG-C |
0.0 |
0.0 |
58.2 |
46.9 |
50.8 |
48.9 |
56.0 |
55.6 |
gene8 |
gene8_1 |
nan |
(1825, ‘C’, ‘CT’) |
2:1I:C-CT |
0.0 |
1.6 |
45.0 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9 |
gene9_1 |
nan |
(339, ‘G’, ‘GA’),(339, ‘G’, ‘GC’),(339, ‘G’, ‘GT’),(339, ‘GC’, ‘G’),(339, ‘GCT’, ‘G’),(339, ‘GC’, ‘G’),(341, ‘TG’, ‘T’) |
2:1I:G-GA,2:1I:G-GC,2:1I:G-GT,2:1D:GC-G,2:2D:GCT-G,2:1D:GC-G,4:1D:TG-T |
0.0 |
0.0 |
50.7 |
45.0 |
46.3 |
45.8 |
68.1 |
59.400000000000006 |
Reference |
Locus |
SNP |
INDEL |
Haplotype_Name |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
() |
() |
nan |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
gene2 |
gene2_1 |
nan |
(3792, ‘ACT’, ‘A’) |
-1:2D:ACT-A |
0 |
0 |
1 |
1 |
0 |
0 |
0 |
0 |
gene3 |
gene3_1 |
(3145, ‘A’, ‘C’) |
(3120, ‘C’, ‘CG’),(3121, ‘G’, ‘GT’),(3120, ‘CG’, ‘C’),(3120, ‘CG’, ‘C’),(3120, ‘CGG’, ‘C’),(3120, ‘CGGGGT’, ‘C’),(3118, ‘TACGGGGTG’, ‘T’),(3121, ‘GGGGTGAAGTC’, ‘G’),(3085, ‘TGCTCACTTGCTGACATACCTAGGTACTC’, ‘T’),(3116, ‘CCTACGGGG’, ‘C’) |
1:1I:C-CG,2:1I:G-GT,1:1D:CG-C,1:1D:CG-C,26:S:A-C,1:2D:CGG-C,1:5D:CGGGGT-C,-1:8D:TACGGGGTG-T,2:10D:GGGGTGAAGTC-G,-34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,-3:8D:CCTACGGGG-C |
0 |
0 |
1 |
2 |
2 |
2 |
2 |
2 |
gene4 |
gene4_1 |
nan |
(861, ‘G’, ‘GA’),(861, ‘G’, ‘GT’),(860, ‘TG’, ‘T’) |
2:1I:G-GA,2:1I:G-GT,1:1D:TG-T |
0 |
0 |
1 |
1 |
0 |
0 |
1 |
1 |
gene5 |
gene5_1 |
nan |
(1212, ‘C’, ‘CA’),(1212, ‘C’, ‘CT’),(1211, ‘AC’, ‘A’),(1212, ‘CCA’, ‘C’),(1212, ‘CCAAT’, ‘C’),(1211, ‘ACCAAT’, ‘A’),(1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’) |
2:1I:C-CA,2:1I:C-CT,1:1D:AC-A,2:2D:CCA-C,2:4D:CCAAT-C,1:5D:ACCAAT-A,1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
0 |
0 |
1 |
0 |
1 |
1 |
2 |
1 |
gene6 |
gene6_1 |
nan |
(739, ‘TCA’, ‘T’) |
0:2D:TCA-T |
0 |
0 |
1 |
2 |
0 |
1 |
0 |
0 |
gene7 |
gene7_1 |
nan |
(339, ‘G’, ‘GA’),(336, ‘CG’, ‘C’) |
2:1I:G-GA,-1:1D:CG-C |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
gene8 |
gene8_1 |
nan |
(1825, ‘C’, ‘CT’) |
2:1I:C-CT |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
gene9 |
gene9_1 |
nan |
(339, ‘G’, ‘GA’),(339, ‘G’, ‘GC’),(339, ‘G’, ‘GT’),(339, ‘GC’, ‘G’),(339, ‘GCT’, ‘G’),(339, ‘GC’, ‘G’),(341, ‘TG’, ‘T’) |
2:1I:G-GA,2:1I:G-GC,2:1I:G-GT,2:1D:GC-G,2:2D:GCT-G,2:1D:GC-G,4:1D:TG-T |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
Command used to run SMAP effect-prediction on a narrow range ROI:
smap effect-prediction haplotype_frequency.tsv genome.fasta borders.gff -a gene_features.gff -u guides.gff -p CAS9 -s 15 -r 20 -t 99 -e dosage -i diploid -g
Reference |
Locus |
Haplotypes |
target |
edit |
start |
end |
SNP |
INDEL |
Alignment |
FILTER_gRNA_INDEL |
FILTER_gRNA_SNP |
FILTER_gRNA |
Haplotype_Name |
Expected cut site |
atgCheck |
splicingSiteCheck |
stopCodonCheck |
protein_sequence |
pairwiseProteinIdentity (%) |
Effect |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
GGCTCTGTTCTTTTACTCGGCCCTGTTTGACGCTCTGGACACGACCACTCCAAGAGACAGCAACCAGAGGATGCT |
gene1 |
ref |
1790 |
1865 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1817 |
MGSSYDPYPSPGADDLFLYLSDLGPASPSAYLDLPPTPQPQPYPQSQQQQQGSKGPTQDMLLPYISSMLMEDDIDDTFFYDYPDNPALLQAQQSFLDILSDDASSPTTTTGTTNSSASVNHSSSDASASAPPTPAAVDSYSPAPAVQFDGFDLDPAAFFSNGANSDLMSSAFLKGMEEANKFLPSQDKLVIDLDPPDDTKRFVLPTRAAENLAPGFNAAATTVPAAVAMAVKEEEVILAALDAALGSGGVVLGRGRRNRLDDDEEDLELQRRSTKQSALQGDGDERDVFEKYIMTCPETCTEQMQQLRIAMQEEAAKEAAVAAGNGKAKGRRGGREVVDLRTLLVHCAQAVASDDRRSATELLRQIKQHASPQGDATQRLAHCFAEGLQARLAGTGSMVYQSLMAKRTSAADILQAYQLYMAAICFKRVVFVFSNNTIYNAALGKMKIHIVDYGIHYGFQWPCFLRWIADREGGPPEVRITGIDLPQPGFRPTQRIEETGRRLSKYAQQFGVPFKYQAIAASKMESIRAEDLNLDPEEVLIVNCLYQFKNLMDESVVIESPRDIVLNNIRKMRPHTFIHAIVNGSFSAPFFVTRFREALFFYSALFDALDTTTPRDSNQRMLIEENLFGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKQQPLNPDVVQQDIGTSNQEEICDASMS* |
NA |
FALSE |
100 |
100 |
100 |
100 |
100 |
100 |
100 |
100 |
|||
gene2 |
gene2_1 |
AGTGCTAGGTGATGCTGCGCGAGTACTGCGAGATCTAATCACTCAAGTGGAATCTCTCAGGCAGGAACAATCTGCTCTTG |
gene2 |
ref |
3751 |
3831 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
3795 |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
NA |
FALSE |
49.5 |
52.8 |
NA |
NA |
57.2 |
52.3 |
45.9 |
50.1 |
|||
gene2 |
gene2_1 |
AGTGCTAGGTGTTGCTGCGCGAGTACTGCGAGATCTAATCACTCAAGTGGAATCTCTCAGGCAGGAGCAATCTGCTCTTG |
gene2 |
0 |
3751 |
3831 |
((3762, ‘A’, ‘T’), (3817, ‘A’, ‘G’)) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-31:S:A-T,24:S:A-G |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
100 |
FALSE |
50.5 |
47.2 |
48.2 |
NA |
NA |
47.7 |
NA |
49.9 |
gene2 |
gene2_1 |
AGTGCTAGGTGATGCTGCGCGAGTACTGCGAGATCTAATCACAAGTGGAATCTCTCAGGCAGGAACAATCTGCTCTTG |
gene2 |
2 |
3751 |
3831 |
() |
((3792, ‘ACT’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:2D:ACT-A |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITSGISQAGTICSCIGAPICQFREE* |
54.8 |
TRUE |
NA |
NA |
51.8 |
45 |
NA |
NA |
NA |
NA |
gene2 |
gene2_1 |
AGTGCTAGGTGTTGCTGCGCGAGTACTGCGAGATCTAATCAAAGTGGAATCTCTCAGGCAGGAGCAATCTGCTCTTG |
gene2 |
3 |
3751 |
3831 |
((3762, ‘A’, ‘T’), (3817, ‘A’, ‘G’)) |
((3792, ‘ACTC’, ‘A’),) |
(data not shown) |
TRUE |
FALSE |
TRUE |
-1:3D:ACTC-A,-31:S:A-T,24:S:A-G |
3795 |
FALSE |
FALSE |
FALSE |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLIKVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
99.5 |
FALSE |
NA |
NA |
NA |
55 |
42.8 |
NA |
54.1 |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
ref |
3078 |
3157 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
3121 |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
NA |
FALSE |
100 |
97 |
44.3 |
NA |
48 |
NA |
4.2 |
5 |
|||
gene3 |
gene3_1 |
CTGACGTGCTCACGTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3091, ‘T’, ‘G’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-28:S:T-G |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
NA |
3 |
NA |
NA |
NA |
NA |
NA |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACATCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3148, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
29:S:G-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
NA |
NA |
5.6 |
NA |
NA |
NA |
NA |
NA |
gene3 |
gene3_1 |
CTGACGTACTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3085, ‘G’, ‘A’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
-34:S:G-A |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
100 |
FALSE |
NA |
NA |
NA |
NA |
4.4 |
NA |
NA |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
-1 |
3078 |
3157 |
() |
((3120, ‘C’, ‘CG’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:1I:C-CG |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
TRUE |
NA |
NA |
47.9 |
55.5 |
47.6 |
40.3 |
47.5 |
56 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
-1 |
3078 |
3157 |
() |
((3121, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GT |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
63.1 |
TRUE |
NA |
NA |
NA |
44.5 |
NA |
NA |
7.6 |
9 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACTGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
0 |
3078 |
3157 |
((3120, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
TRUE |
TRUE |
1:S:G-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYWVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
3 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
1 |
3078 |
3157 |
() |
((3120, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:1D:CG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
24.6 |
22 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGGTGAAGTCTCTGTCGGACGAGCCCAGCCAGCTCT |
gene3 |
1 |
3078 |
3157 |
((3145, ‘A’, ‘C’),) |
((3120, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
FALSE |
TRUE |
1:1D:CG-C,26:S:A-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
3 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
2 |
3078 |
3157 |
() |
((3120, ‘CGG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:2D:CGG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.5 |
TRUE |
NA |
NA |
2.2 |
NA |
NA |
59.7 |
4.2 |
2 |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
3 |
3078 |
3157 |
() |
((3120, ‘CGGG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:3D:CGGG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
4.2 |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
5 |
3078 |
3157 |
() |
((3120, ‘CGGGGT’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:5D:CGGGGT-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
8 |
3078 |
3157 |
() |
((3118, ‘TACGGGGTG’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:8D:TACGGGGTG-T |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSA* |
63.3 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
2.5 |
NA |
gene3 |
gene3_1 |
CTGACGTGCTCACTTGCTGACATACCTAGGTACTCTGCCTACGTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
10 |
3078 |
3157 |
() |
((3121, ‘GGGGTGAAGTC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:10D:GGGGTGAAGTC-G |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYESLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.2 |
FALSE |
NA |
NA |
NA |
NA |
47.6 |
NA |
NA |
NA |
gene3 |
gene3_1 |
CTGACGTTGCTGAAGTCTCTGTCGGACGAGCACAGCCAGCTCT |
gene3 |
36 |
3078 |
3157 |
() |
((3085, ‘TGCTCACTTGCTGACATACCTAGGTACTC’, ‘T’), (3116, ‘CCTACGGGG’, ‘C’)) |
(data not shown) |
TRUE |
nan |
TRUE |
-34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,-3:8D:CCTACGGGG-C |
3121 |
FALSE |
FALSE |
FALSE |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.3 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
3.5 |
NA |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
ref |
827 |
905 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
861 |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
NA |
FALSE |
100 |
98.8 |
48.3 |
64.8 |
98.4 |
98.7 |
53.6 |
41.9 |
|||
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGAGAACCT |
gene4 |
-6 |
827 |
905 |
() |
((78, ‘A——’, ‘AGAACCT’),) |
(data not shown) |
FALSE |
nan |
FALSE |
-781:0I:A——-AGAACCT |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
100 |
FALSE |
NA |
1.2 |
NA |
NA |
1.6 |
1.3 |
NA |
NA |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGACTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
-1 |
827 |
905 |
() |
((861, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GA |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGL* |
13.8 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.5 |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTGTCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
-1 |
827 |
905 |
() |
((861, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GT |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCLRCQQDAGCVVEGEEALHSDAVDGAGAPGPDLQALRCECPCAVQLAPPYQKKPQSMEQPWLQLIGMGTISFRLC* |
23.6 |
TRUE |
NA |
NA |
51.7 |
35.2 |
NA |
NA |
46.4 |
55.3 |
gene4 |
gene4_1 |
GATGGTGTTCTTGTGATGAAGGGTTGGGTCTGTCTCAGGTGCCAGCAAGATGCAGGGTGTGTTGTCGAGGGTGAGGA |
gene4 |
1 |
827 |
905 |
() |
((860, ‘TG’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:1D:TG-T |
861 |
FALSE |
FALSE |
FALSE |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLSQVPARCRVCCRG* |
16.5 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
ref |
1190 |
1272 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1212 |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
NA |
FALSE |
100 |
100 |
38.3 |
45.4 |
43.7 |
42.8 |
4.5 |
2.2 |
|||
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACACAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
-1 |
1190 |
1272 |
() |
((1212, ‘C’, ‘CA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:C-CA |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHTIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACTCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
-1 |
1190 |
1272 |
() |
((1212, ‘C’, ‘CT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:C-CT |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
1 |
1190 |
1272 |
() |
((1211, ‘AC’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:1D:AC-A |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHNPSCWTRYPAPRTRACSCWSSTASAA* |
53.9 |
TRUE |
NA |
NA |
2.1 |
NA |
NA |
NA |
12.3 |
18.5 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
2 |
1190 |
1272 |
() |
((1212, ‘CCA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:2D:CCA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
6 |
4.3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCAATCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
3 |
1190 |
1272 |
() |
((1208, ‘CCCA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-2:3D:CCCA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
45.5 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACTCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
3 |
1190 |
1272 |
() |
((1212, ‘CCAA’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:3D:CCAA-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
FALSE |
NA |
NA |
NA |
54.6 |
NA |
NA |
1.9 |
2.3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
4 |
1190 |
1272 |
() |
((1212, ‘CCAAT’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:4D:CCAAT-C |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPSCWTRYPAPRTRACSCWSSTASAA* |
53.6 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
21.3 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACCCTCCTGCTGGTAAGCGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
5 |
1190 |
1272 |
() |
((1211, ‘ACCAAT’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:5D:ACCAAT-A |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.1 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
1.2 |
gene5 |
gene5_1 |
CGCGCTGCCCATCCCTCCCCACGCGCGGCCGGCGGAGAGCCGGCTGGGACTGGCACTGGGA |
gene5 |
21 |
1190 |
1272 |
() |
((1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’),) |
(data not shown) |
TRUE |
nan |
TRUE |
1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
1212 |
FALSE |
FALSE |
FALSE |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSCWTRYPAPRTRACSCWSSTASAA* |
53.3 |
TRUE |
NA |
NA |
59.6 |
NA |
56.3 |
57.2 |
71.2 |
NA |
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
ref |
704 |
781 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
741 |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
NA |
FALSE |
100 |
96.7 |
52.6 |
NA |
100 |
50.2 |
100 |
100 |
|||
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGCCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((745, ‘T’, ‘C’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
6:S:T-C |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPAPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
99.7 |
FALSE |
NA |
1.1 |
NA |
NA |
NA |
NA |
NA |
NA |
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCATACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((749, ‘G’, ‘A’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
10:S:G-A |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
100 |
FALSE |
NA |
1.1 |
NA |
NA |
NA |
NA |
NA |
NA |
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCACCGGTCCCGTACATTTTCTGTGGTGGGTTGAGGGGAAGGA |
gene6 |
0 |
704 |
781 |
((759, ‘G’, ‘T’),) |
() |
(data not shown) |
nan |
FALSE |
FALSE |
20:S:G-T |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
100 |
FALSE |
NA |
1.1 |
NA |
3.4 |
NA |
NA |
NA |
NA |
gene6 |
gene6_1 |
GATGGAGGGAGACGACTTGTCATCCTTGTCGCCATCCGGTCCCGTACATTTTCGGTGGTGGGTTGAGGGGAAGGA |
gene6 |
2 |
704 |
781 |
() |
((739, ‘TCA’, ‘T’),) |
(data not shown) |
TRUE |
nan |
TRUE |
0:2D:TCA-T |
741 |
FALSE |
FALSE |
FALSE |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSGPVHFRWWVEGKEATGYGEGG* |
65.8 |
TRUE |
NA |
NA |
47.4 |
96.6 |
NA |
49.8 |
NA |
NA |
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGGCCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
ref |
304 |
390 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
339 |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARAVGWPPVRAYRRNALRDEARLVKVAVDGAPYLRKVDLAAHDGYAALLRALHGMFASCLVAGAGADGAGRIDTAAEYMPTYEDKDGDWMLVGDVPFKMFVDSCKRIRLMKSSEAVNLSPRTSSRQ* |
NA |
FALSE |
100 |
100 |
41.8 |
53.1 |
49.2 |
51.1 |
44 |
44.4 |
|||
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGGACCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
-1 |
304 |
390 |
() |
((339, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GA |
339 |
FALSE |
FALSE |
FALSE |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARDRGLAAGPRVPAQRAARRGQAREGGRGRRAVPAEGGPRGARRVRGPAPRAPRHVRLLPRCRSRSRRGGADRHRRRVHAHLRGQGRRLDARRRRPLQDVRGLVQEDPPHEELRGRQPISEDIIPAVIVVGVDAICPTRLISPN* |
49 |
TRUE |
NA |
NA |
58.2 |
46.9 |
50.8 |
48.9 |
1.4 |
55.6 |
gene7 |
gene7_1 |
TTTGCTGACCGACGTCACGTGCTGCAGGGCGCGGCCGTGGGCTGGCCGCCGGTCCGCGCGTACCGGCGCAACGCGCTGCGCGACG |
gene7 |
1 |
304 |
390 |
() |
((336, ‘CG’, ‘C’),) |
(data not shown) |
TRUE |
nan |
TRUE |
-1:1D:CG-C |
339 |
FALSE |
FALSE |
FALSE |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARPWAGRRSARTGATRCATRPGS* |
43.4 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
54.6 |
NA |
gene8 |
gene8_1 |
GCTGAATATTTTTTTCTCTTTGGTTTGTTGCTGTTGTTGTTGTTGGCTGATGCAGGGCTTCAGGAAGATAGTGGCGGACAGGTGGGA |
gene8 |
ref |
1767 |
1854 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
1825 |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQPLPTPMPPHQPYHHHLHHLHHHLSPFSPPPLAQPVPSYHHHHFQEEPIATATAPHGGAQAGAAGGGNNEGSGAGSRRGLSGRANHVAPVTSPSSAAHASLPSAAGGGAAASSCRLMELDPADSPSPPRRPEADDGTDTVKLFGVALQGKKKKRAHQEDGDDGNHEQGSSDV* |
NA |
FALSE |
100 |
98.4 |
55 |
65.5 |
54.6 |
52.5 |
63.6 |
51.5 |
|||
gene8 |
gene8_1 |
GCTGAATATTTTTTTCTCTTTGGTTTGTTGCTGTTGTTGTTGTTGGCTGATGCAGGGCTTTCAGGAAGATAGTGGCGGACAGGTGGGA |
gene8 |
-1 |
1767 |
1854 |
() |
((1825, ‘C’, ‘CT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:C-CT |
1825 |
FALSE |
FALSE |
FALSE |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFQEDSGGQVGVRQRVLQEGRQAPTRRDPPEEVVAAAADADAAAPALPPPPPPSPPPPQPVLPAAAGTAGAVVPPPPLPRRAHRHRHRAARRCSSRRRRWRQQ* |
39.1 |
TRUE |
NA |
1.6 |
45 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
ref |
315 |
402 |
nan |
nan |
(data not shown) |
nan |
nan |
nan |
ref |
339 |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
NA |
FALSE |
100 |
100 |
49.3 |
55 |
53.7 |
54.2 |
29.6 |
38.5 |
|||
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGACTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GA’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GA |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVTGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
5.6 |
8.9 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGCCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GC’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GC |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVPGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTCTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
-1 |
315 |
402 |
() |
((339, ‘G’, ‘GT’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1I:G-GT |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVSGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
50.7 |
45 |
NA |
NA |
56.5 |
1.1 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
1 |
315 |
402 |
() |
((339, ‘GC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1D:GC-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVWPSPRASSWAGPRPRPSRWRAPSR* |
34 |
TRUE |
NA |
NA |
NA |
NA |
46.3 |
NA |
2.3 |
2.4 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
2 |
315 |
402 |
() |
((339, ‘GCT’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
2:2D:GCT-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
NA |
NA |
NA |
45.8 |
2.5 |
1.9 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGTGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
2 |
315 |
402 |
() |
((339, ‘GC’, ‘G’), (341, ‘TG’, ‘T’)) |
(data not shown) |
TRUE |
nan |
TRUE |
2:1D:GC-G,4:1D:TG-T |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVCHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
TRUE |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
42.1 |
gene9 |
gene9_1 |
GGCGGCAAGCGCCTCCGCCCCGTGGCCATCGCCGCGTGCGAGCTCGTGGGCGGGACCGCGGCCGCGGCCGTCCCGGTGGCGTGC |
gene9 |
3 |
315 |
402 |
() |
((337, ‘GTGC’, ‘G’),) |
(data not shown) |
TRUE |
nan |
TRUE |
0:3D:GTGC-G |
339 |
FALSE |
FALSE |
FALSE |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
99.7 |
FALSE |
NA |
NA |
NA |
NA |
NA |
NA |
2.3 |
2.1 |
Haplotype |
Reference |
Locus |
target |
Expected cut site |
FILTER_gRNA |
atgCheck |
splicingSiteCheck |
protein_sequence |
pairwiseProteinIdentity (%) |
Effect |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1_1_ref |
gene1 |
gene1_1 |
gene1 |
1817 |
False |
MGSSYDPYPSPGADDLFLYLSDLGPASPSAYLDLPPTPQPQPYPQSQQQQQGSKGPTQDMLLPYISSMLMEDDIDDTFFYDYPDNPALLQAQQSFLDILSDDASSPTTTTGTTNSSASVNHSSSDASASAPPTPAAVDSYSPAPAVQFDGFDLDPAAFFSNGANSDLMSSAFLKGMEEANKFLPSQDKLVIDLDPPDDTKRFVLPTRAAENLAPGFNAAATTVPAAVAMAVKEEEVILAALDAALGSGGVVLGRGRRNRLDDDEEDLELQRRSTKQSALQGDGDERDVFEKYIMTCPETCTEQMQQLRIAMQEEAAKEAAVAAGNGKAKGRRGGREVVDLRTLLVHCAQAVASDDRRSATELLRQIKQHASPQGDATQRLAHCFAEGLQARLAGTGSMVYQSLMAKRTSAADILQAYQLYMAAICFKRVVFVFSNNTIYNAALGKMKIHIVDYGIHYGFQWPCFLRWIADREGGPPEVRITGIDLPQPGFRPTQRIEETGRRLSKYAQQFGVPFKYQAIAASKMESIRAEDLNLDPEEVLIVNCLYQFKNLMDESVVIESPRDIVLNNIRKMRPHTFIHAIVNGSFSAPFFVTRFREALFFYSALFDALDTTTPRDSNQRMLIEENLFGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKQQPLNPDVVQQDIGTSNQEEICDASMS* |
NA |
False |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
100.0 |
||
gene2_1_ref |
gene2 |
gene2_1 |
gene2 |
3795 |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITQVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
NA |
False |
100.0 |
100.0 |
48.2 |
NA |
57.2 |
100.0 |
45.9 |
100.0 |
||
gene2_1_-1:2D:ACT-A |
gene2 |
gene2_1 |
gene2 |
3795 |
True |
False |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLITSGISQAGTICSCIGAPICQFREE* |
54.8 |
True |
NA |
NA |
51.8 |
45.0 |
NA |
NA |
NA |
NA |
gene2_1_-1:3D:ACTC-A |
gene2 |
gene2_1 |
gene2 |
3795 |
True |
False |
False |
EFPCRWGRRRRHVSPRYRLGHTSVRVGGRHTLAAPACVCSPPTLPALALHFPWQSSLVPDFLPERIRPPSIRPPVPAGLRGSSAWDQDPSRPRHPRAKDRIKARTNILGMVADTESSDSLPGSSNAASEMPANGSIHRKSQEKPPKKTHKAEREKLKRDQLNDLFVELGSMLDLDRQNTGKATVLGDAARVLRDLIKVESLRQEQSALVSERQYVSSEKNELQEENSSLKSQISELQTELCARMRSSSLSQTSIGMSDPATHQQMQMWSSIPHLSSVAMAARPASAASPLHGQEGYSADAGQAGYAPQPQPRELQLFPGSSASSSPERERSSRLGSGQATPPSLTDSLPGQLCLSLLQPSQEASGGGGGGVMSRSREERRDG* |
99.5 |
False |
NA |
NA |
NA |
55.0 |
42.8 |
NA |
54.1 |
NA |
gene3_1_ref |
gene3 |
gene3_1 |
gene3 |
3121 |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
NA |
False |
100.0 |
100.0 |
49.9 |
NA |
52.4 |
NA |
4.2 |
5.0 |
||
gene3_1_-1:8D:TACGGGGTG-T |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSA* |
63.3 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
2.5 |
NA |
gene3_1_-3:8D:CCTACGGGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.3 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
3.5 |
NA |
gene3_1_1:1D:CG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYG* |
63.8 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
24.6 |
25.0 |
gene3_1_1:1I:C-CG |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
True |
NA |
NA |
47.9 |
55.5 |
47.6 |
40.3 |
47.5 |
56.0 |
gene3_1_1:2D:CGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.5 |
True |
NA |
NA |
2.2 |
NA |
NA |
59.7 |
4.2 |
2.0 |
gene3_1_1:3D:CGGG-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
4.2 |
NA |
gene3_1_1:5D:CGGGGT-C |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
62.6 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
NA |
gene3_1_1:S:G-T |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYWVKSLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
3.0 |
gene3_1_2:10D:GGGGTGAAGTC-G |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYESLSDEHSQLLSGGGGMDASMDNSWRLLPSQTAATFQATSYPLFGALSGLDESTIASLPKTQREPLSFFGSDFVTPKQENQTLRPFFDEWPKSRDSWPELNEDNSLGSSATQLSISIPMAPSDFNTSSRSPNGIPSR* |
99.2 |
False |
NA |
NA |
NA |
NA |
47.6 |
NA |
NA |
NA |
gene3_1_2:1I:G-GT |
gene3 |
gene3_1 |
gene3 |
3121 |
True |
False |
False |
MAMPFASLSPAADHRPSSLLPYCRAAPLSAVGEDAAAQAQQQQQHAMSGRWAARPPALFTAAQYEELEHQALIYKYLVAGVPVPPDLLLPLRRGFVYHQPALGYGPYFGKKVDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVPPPHAQQQQQQQAPAPTAGFQSHPMYPSILAGNGGGGGGVGGGAGGGGTFGLGPTSQLHMDSAAAYATAAGGGSKDLRYSAYVGEVSVGRAQPALVRRRRHGRVNGQLVAPVAVPNRRHVPGHKLPSVRRAERSGREHHRLAAQDAEGAPLLLRERLRDPEAGEPDAAPLLRRVAQVEGLVAGAERGQQPRLLGHPALHLHPHGALRLQHQLQIAEWNTVKVKPSIRRHTCFFFLLFFRFEPFVLRTFF* |
63.1 |
True |
NA |
NA |
NA |
44.5 |
NA |
NA |
7.6 |
9.0 |
gene4_1_ref |
gene4 |
gene4_1 |
gene4 |
861 |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCSGASKMQGVLSRVRRPFTPTQWMELEHQALIYKHFAVNAPVPSSLLLPIKRSLNPWSSLGSSSLGWAPFRSGSADAEPGRCRRTDGKKWRCSRDAVGDQKYCERHIKRGCHRSRKHVEGRKATPTTADPTMAVSGGSLLHSHAVAWQQQGKSSAANVTDPFSLGSNRNLLDKQNLGDQFSISTSMDSFDFSSSHSSPNQAKVAFSPVAMQHEHDQLYLVHGAGSSAENVNKSQDGQLLVSRETIDDGPLGEVFKGKSCQSASADILTDHWTSTRDLRPPTGILQMSSSNTVPAENHTSNSSYLMARMANSQTVPTLH* |
NA |
False |
100.0 |
100.0 |
48.3 |
64.8 |
100.0 |
100.0 |
53.6 |
41.9 |
||
gene4_1_1:1D:TG-T |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLSQVPARCRVCCRG* |
16.5 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.3 |
gene4_1_2:1I:G-GA |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGL* |
13.8 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.5 |
gene4_1_2:1I:G-GT |
gene4 |
gene4_1 |
gene4 |
861 |
True |
False |
False |
MEGGQDVFLGAAARAPPPPPSCPFHGSATATRSGGAQMLSFSSNGVAGLGLCLRCQQDAGCVVEGEEALHSDAVDGAGAPGPDLQALRCECPCAVQLAPPYQKKPQSMEQPWLQLIGMGTISFRLC* |
23.6 |
True |
NA |
NA |
51.7 |
35.2 |
NA |
NA |
46.4 |
55.3 |
gene5_1_ref |
gene5 |
gene5_1 |
gene5 |
1212 |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
NA |
False |
100.0 |
100.0 |
38.3 |
45.4 |
43.7 |
42.8 |
4.5 |
2.2 |
||
gene5_1_-2:3D:CCCA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPQSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
45.5 |
gene5_1_1:1D:AC-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHNPSCWTRYPAPRTRACSCWSSTASAA* |
53.9 |
True |
NA |
NA |
2.1 |
NA |
NA |
NA |
12.3 |
18.5 |
gene5_1_1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSCWTRYPAPRTRACSCWSSTASAA* |
53.3 |
True |
NA |
NA |
59.6 |
NA |
56.3 |
57.2 |
71.2 |
NA |
gene5_1_1:5D:ACCAAT-A |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.1 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
1.2 |
gene5_1_2:1I:C-CA |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHTIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
1.7 |
gene5_1_2:1I:C-CT |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3.0 |
gene5_1_2:2D:CCA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHIPPAGRDIQRREPEPAVAGAARPRRHDPQRQERGRAAPAPAPAPAARSG* |
57.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
6.0 |
4.3 |
gene5_1_2:3D:CCAA-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHSLLLDEISSAANPSLQLLEQHGLGGMIPSGRNAAALHPHPPQPQPPAAGKGAKEPSPRANSAINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQGPKKTSLLPQDHQRSDGGGLLKEGLYAAAANMGVAPY* |
99.7 |
False |
NA |
NA |
NA |
54.6 |
NA |
NA |
1.9 |
2.3 |
gene5_1_2:4D:CCAAT-C |
gene5 |
gene5_1 |
gene5 |
1212 |
True |
False |
False |
MSSSSSSSSAATVFPPSPQLPPPLLVENLPPLHQLTPPVAAAAAPASEQLCYVHCHFCDTVLVVSVPTSSLFKTVTVRCGHCSSLLTVNMRGLLFPGTPANTAAAAAAAPPPPPAAVTSTTATITTAPAPPPATSVNNNGQFHFIPHSLDLALPIPPHPSCWTRYPAPRTRACSCWSSTASAA* |
53.6 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
21.3 |
gene6_1_ref |
gene6 |
gene6_1 |
gene6 |
741 |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSPVPYIFGGGLRGRKPPAMEKVVERRQRRMIKNRESAARSRQRKQKNPHGTGARLNGDGVAVTSVFGLDGEDHREGDQRRPKEAAEAHERSREARDVTRQKTGEYTDASREAAQEARDRSRATAQEGRHRRQGEGGQGRGRGHSSATRIWR* |
NA |
False |
100.0 |
99.99999999999999 |
52.6 |
3.4 |
100.0 |
50.2 |
100.0 |
100.0 |
||
gene6_1_0:2D:TCA-T |
gene6 |
gene6_1 |
gene6 |
741 |
True |
False |
False |
MDFPGGSGRRPQQQEPEHLPPMTPLPLARQGSVYSLTFDEFQSSLGGAAKDFGSMNMDELLRSIWSAEEVHSVAAASASAADHAHAAARGPVSIQHQGSLTLPRTLSQKTVDEVWRDLTCVGGGPSSGSAAPAAPPPPAQRHPTLGEITLEEFLVRAGVVREDMTAPPPVPPAPVCPAPAPRPPVLFPHGNVLAPLVPPLQFGNGFVSGAVGQQRGGPVPPAVSPRPVTASAFGKMEGDDLSSLSPSGPVHFRWWVEGKEATGYGEGG* |
65.8 |
True |
NA |
NA |
47.4 |
96.6 |
NA |
49.8 |
NA |
NA |
gene7_1_ref |
gene7 |
gene7_1 |
gene7 |
339 |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARAVGWPPVRAYRRNALRDEARLVKVAVDGAPYLRKVDLAAHDGYAALLRALHGMFASCLVAGAGADGAGRIDTAAEYMPTYEDKDGDWMLVGDVPFKMFVDSCKRIRLMKSSEAVNLSPRTSSRQ* |
NA |
False |
100.0 |
100.0 |
41.8 |
53.1 |
49.2 |
51.1 |
44.0 |
44.4 |
||
gene7_1_-1:1D:CG-C |
gene7 |
gene7_1 |
gene7 |
339 |
True |
False |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARPWAGRRSARTGATRCATRPGS* |
43.4 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
54.6 |
NA |
gene7_1_2:1I:G-GA |
gene7 |
gene7_1 |
gene7 |
339 |
True |
False |
False |
MQQDLRNSERRNPEQAHPVMSASSTNSAASPAVSGLDYDDTALTLALPGSSAEPAADRKRAHADHDKPPSPKARDRGLAAGPRVPAQRAARRGQAREGGRGRRAVPAEGGPRGARRVRGPAPRAPRHVRLLPRCRSRSRRGGADRHRRRVHAHLRGQGRRLDARRRRPLQDVRGLVQEDPPHEELRGRQPISEDIIPAVIVVGVDAICPTRLISPN* |
49.0 |
True |
NA |
NA |
58.2 |
46.9 |
50.8 |
48.9 |
1.4 |
55.6 |
gene8_1_ref |
gene8 |
gene8_1 |
gene8 |
1825 |
False |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQPLPTPMPPHQPYHHHLHHLHHHLSPFSPPPLAQPVPSYHHHHFQEEPIATATAPHGGAQAGAAGGGNNEGSGAGSRRGLSGRANHVAPVTSPSSAAHASLPSAAGGGAAASSCRLMELDPADSPSPPRRPEADDGTDTVKLFGVALQGKKKKRAHQEDGDDGNHEQGSSDV* |
NA |
False |
100.0 |
98.4 |
55.0 |
65.5 |
54.6 |
52.5 |
63.6 |
51.5 |
||
gene8_1_2:1I:C-CT |
gene8 |
gene8_1 |
gene8 |
1825 |
True |
False |
False |
MAFLVERCGEMVVSMESPHAKPVPAPFLTKTYQLVDDPCTDHIVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFQEDSGGQVGVRQRVLQEGRQAPTRRDPPEEVVAAAADADAAAPALPPPPPPSPPPPQPVLPAAAGTAGAVVPPPPLPRRAHRHRHRAARRCSSRRRRWRQQ* |
39.1 |
True |
NA |
1.6 |
45.0 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9_1_ref |
gene9 |
gene9_1 |
gene9 |
339 |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVLAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
NA |
False |
100.0 |
100.0 |
49.3 |
55.0 |
53.7 |
54.2 |
29.6 |
38.5 |
||
gene9_1_0:3D:GTGC-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVAIAACELVGGTAAAAVPVACAVEMIHTASLIHDDMPCMDDDALRRGRPSNHVAFGEPTALLAGDALLALAFEHVARGSAGAGVPADRALRAVVELGSVAGVGGIAAGQVADMASEGAPSGSVSLAALEYIHVHKTARLVEAAAVSGAVVGGGGDGEVERVRRYAHFLGLLGQVVDDVLDVTGTSEQLGKTAGKDVAAGKATYPRLMGLKGARAYMGELLAKAEAELDGLDAAPTAPLRHLARGGDHIDVMVVVGYDWVGFGVGIG* |
99.7 |
False |
NA |
NA |
NA |
NA |
NA |
NA |
2.3 |
2.1 |
gene9_1_2:1D:GC-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVWPSPRASSWAGPRPRPSRWRAPSR* |
34.0 |
True |
NA |
NA |
NA |
NA |
46.3 |
NA |
2.3 |
2.4 |
gene9_1_2:1D:GC-G,4:1D:TG-T |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVCHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
NA |
42.1 |
gene9_1_2:1I:G-GA |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVTGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
5.6 |
8.9 |
gene9_1_2:1I:G-GC |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVPGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
NA |
1.2 |
3.0 |
gene9_1_2:1I:G-GT |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVSGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
50.7 |
45.0 |
NA |
NA |
56.5 |
1.1 |
gene9_1_2:2D:GCT-G |
gene9 |
gene9_1 |
gene9 |
339 |
True |
False |
False |
MNKLASCFLQHGAPHTQIFKSYHVQRSPSLQLLENRSVSMTRHRAADRAARGTIIDVAVDSGTSFDFESYLSAKARAVHNALDLTLQGLRCPEVLSESMRYSVLAGGKRLRPVGHRRVRARGRDRGRGRPGGVRRRDDPHRVAHPRRHAVHGRRRAPPRPPLQPRRVRRAHGATRRRRAAGARFRARRPRQRGRRRPRGPRAPRRRGARERSWRRRHRRGAGRRHGERGSPLRLREPGRAGVHPCA* |
38.9 |
True |
NA |
NA |
NA |
NA |
NA |
45.8 |
2.5 |
1.9 |
Reference |
Locus |
SNP |
INDEL |
Haplotype_Name |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
() |
() |
nan |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene2 |
gene2_1 |
nan |
(3792, ‘ACT’, ‘A’) |
-1:2D:ACT-A |
0.0 |
0.0 |
51.8 |
45.0 |
0.0 |
0.0 |
0.0 |
0.0 |
gene3 |
gene3_1 |
(3145, ‘A’, ‘C’) |
(3120, ‘C’, ‘CG’),(3121, ‘G’, ‘GT’),(3120, ‘CG’, ‘C’),(3120, ‘CG’, ‘C’),(3120, ‘CGG’, ‘C’),(3120, ‘CGGGGT’, ‘C’),(3118, ‘TACGGGGTG’, ‘T’),(3085, ‘TGCTCACTTGCTGACATACCTAGGTACTC’, ‘T’),(3116, ‘CCTACGGGG’, ‘C’) |
1:1I:C-CG,2:1I:G-GT,1:1D:CG-C,1:1D:CG-C,26:S:A-C,1:2D:CGG-C,1:5D:CGGGGT-C,-1:8D:TACGGGGTG-T,-34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,-3:8D:CCTACGGGG-C |
0.0 |
0.0 |
50.1 |
100.0 |
47.6 |
100.0 |
91.60000000000001 |
92.0 |
gene4 |
gene4_1 |
nan |
(861, ‘G’, ‘GA’),(861, ‘G’, ‘GT’),(860, ‘TG’, ‘T’) |
2:1I:G-GA,2:1I:G-GT,1:1D:TG-T |
0.0 |
0.0 |
51.7 |
35.2 |
0.0 |
0.0 |
46.4 |
58.099999999999994 |
gene5 |
gene5_1 |
nan |
(1212, ‘C’, ‘CA’),(1212, ‘C’, ‘CT’),(1211, ‘AC’, ‘A’),(1212, ‘CCA’, ‘C’),(1212, ‘CCAAT’, ‘C’),(1211, ‘ACCAAT’, ‘A’),(1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’) |
2:1I:C-CA,2:1I:C-CT,1:1D:AC-A,2:2D:CCA-C,2:4D:CCAAT-C,1:5D:ACCAAT-A,1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
0.0 |
0.0 |
61.7 |
0.0 |
56.3 |
57.2 |
91.9 |
50.0 |
gene6 |
gene6_1 |
nan |
(739, ‘TCA’, ‘T’) |
0:2D:TCA-T |
0.0 |
0.0 |
47.4 |
96.6 |
0.0 |
49.8 |
0.0 |
0.0 |
gene7 |
gene7_1 |
nan |
(339, ‘G’, ‘GA’),(336, ‘CG’, ‘C’) |
2:1I:G-GA,-1:1D:CG-C |
0.0 |
0.0 |
58.2 |
46.9 |
50.8 |
48.9 |
56.0 |
55.6 |
gene8 |
gene8_1 |
nan |
(1825, ‘C’, ‘CT’) |
2:1I:C-CT |
0.0 |
1.6 |
45.0 |
34.5 |
45.4 |
47.5 |
36.4 |
48.5 |
gene9 |
gene9_1 |
nan |
(339, ‘G’, ‘GA’),(339, ‘G’, ‘GC’),(339, ‘G’, ‘GT’),(339, ‘GC’, ‘G’),(339, ‘GCT’, ‘G’),(339, ‘GC’, ‘G’),(341, ‘TG’, ‘T’) |
2:1I:G-GA,2:1I:G-GC,2:1I:G-GT,2:1D:GC-G,2:2D:GCT-G,2:1D:GC-G,4:1D:TG-T |
0.0 |
0.0 |
50.7 |
45.0 |
46.3 |
45.8 |
68.1 |
59.400000000000006 |
Reference |
Locus |
SNP |
INDEL |
Haplotype_Name |
sample1 |
sample2 |
sample3 |
sample4 |
sample5 |
sample6 |
sample7 |
sample8 |
---|---|---|---|---|---|---|---|---|---|---|---|---|
gene1 |
gene1_1 |
() |
() |
nan |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
gene2 |
gene2_1 |
nan |
(3792, ‘ACT’, ‘A’) |
-1:2D:ACT-A |
0 |
0 |
1 |
1 |
0 |
0 |
0 |
0 |
gene3 |
gene3_1 |
(3145, ‘A’, ‘C’) |
(3120, ‘C’, ‘CG’),(3121, ‘G’, ‘GT’),(3120, ‘CG’, ‘C’),(3120, ‘CG’, ‘C’),(3120, ‘CGG’, ‘C’),(3120, ‘CGGGGT’, ‘C’),(3118, ‘TACGGGGTG’, ‘T’),(3085, ‘TGCTCACTTGCTGACATACCTAGGTACTC’, ‘T’),(3116, ‘CCTACGGGG’, ‘C’) |
1:1I:C-CG,2:1I:G-GT,1:1D:CG-C,1:1D:CG-C,26:S:A-C,1:2D:CGG-C,1:5D:CGGGGT-C,-1:8D:TACGGGGTG-T,-34:28D:TGCTCACTTGCTGACATACCTAGGTACTC-T,-3:8D:CCTACGGGG-C |
0 |
0 |
1 |
2 |
1 |
2 |
2 |
2 |
gene4 |
gene4_1 |
nan |
(861, ‘G’, ‘GA’),(861, ‘G’, ‘GT’),(860, ‘TG’, ‘T’) |
2:1I:G-GA,2:1I:G-GT,1:1D:TG-T |
0 |
0 |
1 |
1 |
0 |
0 |
1 |
1 |
gene5 |
gene5_1 |
nan |
(1212, ‘C’, ‘CA’),(1212, ‘C’, ‘CT’),(1211, ‘AC’, ‘A’),(1212, ‘CCA’, ‘C’),(1212, ‘CCAAT’, ‘C’),(1211, ‘ACCAAT’, ‘A’),(1211, ‘ACCAATCCCTCCTGCTGGTAAG’, ‘A’) |
2:1I:C-CA,2:1I:C-CT,1:1D:AC-A,2:2D:CCA-C,2:4D:CCAAT-C,1:5D:ACCAAT-A,1:21D:ACCAATCCCTCCTGCTGGTAAG-A |
0 |
0 |
1 |
0 |
1 |
1 |
2 |
1 |
gene6 |
gene6_1 |
nan |
(739, ‘TCA’, ‘T’) |
0:2D:TCA-T |
0 |
0 |
1 |
2 |
0 |
1 |
0 |
0 |
gene7 |
gene7_1 |
nan |
(339, ‘G’, ‘GA’),(336, ‘CG’, ‘C’) |
2:1I:G-GA,-1:1D:CG-C |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
gene8 |
gene8_1 |
nan |
(1825, ‘C’, ‘CT’) |
2:1I:C-CT |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |
gene9 |
gene9_1 |
nan |
(339, ‘G’, ‘GA’),(339, ‘G’, ‘GC’),(339, ‘G’, ‘GT’),(339, ‘GC’, ‘G’),(339, ‘GCT’, ‘G’),(339, ‘GC’, ‘G’),(341, ‘TG’, ‘T’) |
2:1I:G-GA,2:1I:G-GC,2:1I:G-GT,2:1D:GC-G,2:2D:GCT-G,2:1D:GC-G,4:1D:TG-T |
0 |
0 |
1 |
1 |
1 |
1 |
1 |
1 |